FFCP PHASE1:Mm9::chr9:94434202..94434229,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=57|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:94434202..94434229,-|id=chr9:94434202..94434229,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.31e-08!18;UBERON:0000948!4.31e-08!18;UBERON:0005498!4.31e-08!18;UBERON:0004140!4.31e-08!18;UBERON:0009881!4.31e-08!18;UBERON:0004141!4.31e-08!18;UBERON:0003084!4.31e-08!18;UBERON:0007005!4.31e-08!18;UBERON:0004139!4.31e-08!18;UBERON:0004291!4.31e-08!18;UBERON:0000025!2.46e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.18e-30,9;UBERON:0000019,8.18e-30,9;UBERON:0000047,8.18e-30,9;UBERON:0010312,8.18e-30,9;UBERON:0004088,8.18e-30,9;UBERON:0002104,8.18e-30,9;UBERON:0001456,8.18e-30,9;UBERON:0003072,8.18e-30,9;UBERON:0004128,8.18e-30,9;UBERON:0003071,8.18e-30,9;UBERON:0001444,2.21e-24,11;UBERON:0000020,2.43e-22,12;UBERON:0001032,2.43e-22,12;UBERON:0004456,2.43e-22,12;UBERON:0000033,1.29e-20,13;UBERON:0005085,1.29e-20,13;UBERON:0002346,1.22e-08,64;UBERON:0003075,1.22e-08,64;UBERON:0007284,1.22e-08,64;UBERON:0002037,4.05e-08,4;UBERON:0002680,4.05e-08,4;UBERON:0001895,4.05e-08,4;UBERON:0010092,4.05e-08,4;UBERON:0006215,4.05e-08,4;UBERON:0010371,1.81e-07,73;UBERON:0007811,2.72e-07,36;UBERON:0003056,4.85e-07,49;UBERON:0004121,7.06e-07,95;UBERON:0000924,7.06e-07,95;UBERON:0006601,7.06e-07,95|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.397163804803541,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0.289864488701678,0,0.679971333707751,0,0,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,1.25668024088073,0,0.11981512450592,0,0,0.599162557619291,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,0,0.162241263067758,0,0.373220911830279,0,0.210441855886474,0,0,1.26043490863744,4.52114453507145,6.39543092022482,5.25266253167884,4.96619140166563,6.46758426847539,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.621377317606506,0.938104239924385,0.900310307305074,0.946978942340841,0.590292695242212,0.308534225774757,0,0.536546802799238,0.116765342367169,0.493679549740441,0.492502392237286,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.324270453550071,0.549122826376163,0,2.97712758134803,0.936113019343682,0.505157755894224,0,0,0.369506380333209,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.172684981865896,0.723245292907558,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0.509935289981566,0.139951452323658,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.302899349844443,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0.755393897389701,0,0,0,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p@chr9:94434202..94434229,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:94434202..94434229,- | |||
|id=chr9:94434202..94434229,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.31e-08!18;UBERON:0000948!4.31e-08!18;UBERON:0005498!4.31e-08!18;UBERON:0004140!4.31e-08!18;UBERON:0009881!4.31e-08!18;UBERON:0004141!4.31e-08!18;UBERON:0003084!4.31e-08!18;UBERON:0007005!4.31e-08!18;UBERON:0004139!4.31e-08!18;UBERON:0004291!4.31e-08!18;UBERON:0000025!2.46e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,8.18e-30,9;UBERON:0000019,8.18e-30,9;UBERON:0000047,8.18e-30,9;UBERON:0010312,8.18e-30,9;UBERON:0004088,8.18e-30,9;UBERON:0002104,8.18e-30,9;UBERON:0001456,8.18e-30,9;UBERON:0003072,8.18e-30,9;UBERON:0004128,8.18e-30,9;UBERON:0003071,8.18e-30,9;UBERON:0001444,2.21e-24,11;UBERON:0000020,2.43e-22,12;UBERON:0001032,2.43e-22,12;UBERON:0004456,2.43e-22,12;UBERON:0000033,1.29e-20,13;UBERON:0005085,1.29e-20,13;UBERON:0002346,1.22e-08,64;UBERON:0003075,1.22e-08,64;UBERON:0007284,1.22e-08,64;UBERON:0002037,4.05e-08,4;UBERON:0002680,4.05e-08,4;UBERON:0001895,4.05e-08,4;UBERON:0010092,4.05e-08,4;UBERON:0006215,4.05e-08,4;UBERON:0010371,1.81e-07,73;UBERON:0007811,2.72e-07,36;UBERON:0003056,4.85e-07,49;UBERON:0004121,7.06e-07,95;UBERON:0000924,7.06e-07,95;UBERON:0006601,7.06e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.0850432901510698,0.397163804803541,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0.15279824777681,0,0.284743361598206,0,0,0,0.289864488701678,0,0.679971333707751,0,0,1.34408066129201,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,1.25668024088073,0,0.11981512450592,0,0,0.599162557619291,0.457500602818626,0.125654352112864,0.173824320192276,0.511430914660661,0,0.162241263067758,0,0.373220911830279,0,0.210441855886474,0,0,1.26043490863744,4.52114453507145,6.39543092022482,5.25266253167884,4.96619140166563,6.46758426847539,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.621377317606506,0.938104239924385,0.900310307305074,0.946978942340841,0.590292695242212,0.308534225774757,0,0.536546802799238,0.116765342367169,0.493679549740441,0.492502392237286,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38992817423824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0.324270453550071,0.549122826376163,0,2.97712758134803,0.936113019343682,0.505157755894224,0,0,0.369506380333209,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0.159454768657487,0.163863314715738,0.172684981865896,0.723245292907558,0,0,0,0,0,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0.177340233642274,0,0,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0.164140899745061,0,0,0,0,0.185194527369712,0,0,0,0.509935289981566,0.139951452323658,0,0,0,0,0,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.302899349844443,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0,0.685082519770642,0.755393897389701,0,0,0,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0.50695859978048,0.377252682772152,0,0.0640251524048693,0.0574354689556133,0,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0,0,0.290692833264657,0.188218760830661,0.169229215783353,0,0,0.135804113845862,0,0,0.197008964751127,0.409231043169689,0.154936841185966,0,0,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr9:94434202..94434229,- | |||
}} |
Revision as of 18:59, 14 September 2013
Short description: | p@chr9:94434202..94434229, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:94434202..94434229, - |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 8.18e-30 | 9 |
camera-type eye | 8.18e-30 | 9 |
simple eye | 8.18e-30 | 9 |
immature eye | 8.18e-30 | 9 |
ocular region | 8.18e-30 | 9 |
visual system | 8.18e-30 | 9 |
face | 8.18e-30 | 9 |
optic cup | 8.18e-30 | 9 |
optic vesicle | 8.18e-30 | 9 |
eye primordium | 8.18e-30 | 9 |
subdivision of head | 2.21e-24 | 11 |
sense organ | 2.43e-22 | 12 |
sensory system | 2.43e-22 | 12 |
entire sense organ system | 2.43e-22 | 12 |
head | 1.29e-20 | 13 |
ectodermal placode | 1.29e-20 | 13 |
neurectoderm | 1.22e-08 | 64 |
neural plate | 1.22e-08 | 64 |
presumptive neural plate | 1.22e-08 | 64 |
cerebellum | 4.05e-08 | 4 |
regional part of metencephalon | 4.05e-08 | 4 |
metencephalon | 4.05e-08 | 4 |
future metencephalon | 4.05e-08 | 4 |
rhombic lip | 4.05e-08 | 4 |
ecto-epithelium | 1.81e-07 | 73 |
craniocervical region | 2.72e-07 | 36 |
pre-chordal neural plate | 4.85e-07 | 49 |
ectoderm-derived structure | 7.06e-07 | 95 |
ectoderm | 7.06e-07 | 95 |
presumptive ectoderm | 7.06e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.