FFCP PHASE1:Mm9::chr11:78748924..78748935,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=94|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:78748924..78748935,+|id=chr11:78748924..78748935,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005157!6.84e-12!27;UBERON:0005153!2.02e-10!17;UBERON:0002048!1.09e-09!14;UBERON:0000117!1.09e-09!14;UBERON:0000171!1.09e-09!14;UBERON:0000170!1.09e-09!14;UBERON:0005597!1.09e-09!14;UBERON:0000118!1.09e-09!14;UBERON:0009569!1.46e-08!66;UBERON:0004872!3.14e-08!33;UBERON:0005178!3.14e-07!17;UBERON:0005181!3.14e-07!17;UBERON:0002224!3.14e-07!17;UBERON:0000915!3.14e-07!17;UBERON:0008947!3.14e-07!17;UBERON:0003258!3.14e-07!17;UBERON:0007100!5.15e-07!18;UBERON:0000948!5.15e-07!18;UBERON:0005498!5.15e-07!18;UBERON:0004140!5.15e-07!18;UBERON:0009881!5.15e-07!18;UBERON:0004141!5.15e-07!18;UBERON:0003084!5.15e-07!18;UBERON:0007005!5.15e-07!18;UBERON:0004139!5.15e-07!18;UBERON:0004291!5.15e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0005153,3.85e-27,17;UBERON:0002048,1.78e-25,14;UBERON:0000117,1.78e-25,14;UBERON:0000171,1.78e-25,14;UBERON:0000170,1.78e-25,14;UBERON:0005597,1.78e-25,14;UBERON:0000118,1.78e-25,14;UBERON:0005157,5.30e-23,20;UBERON:0005178,6.28e-21,17;UBERON:0005181,6.28e-21,17;UBERON:0002224,6.28e-21,17;UBERON:0000915,6.28e-21,17;UBERON:0008947,6.28e-21,17;UBERON:0003258,6.28e-21,17;UBERON:0000065,1.97e-08,41;UBERON:0001004,3.22e-08,42;UBERON:0001048,6.31e-07,134;UBERON:0000025,7.16e-07,114;UBERON:0007100,8.93e-07,18;UBERON:0000948,8.93e-07,18;UBERON:0005498,8.93e-07,18;UBERON:0004140,8.93e-07,18;UBERON:0009881,8.93e-07,18;UBERON:0004141,8.93e-07,18;UBERON:0003084,8.93e-07,18;UBERON:0007005,8.93e-07,18;UBERON:0004139,8.93e-07,18;UBERON:0004291,8.93e-07,18|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0.879666139307728,0,0.722996784599558,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0.697601834251224,0.804820204198858,0.350296027101508,0.822799249567402,0.985004784474571,1.4592385718254,2.04679982395465,2.19550115291051,1.34206418760372,0,0,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0.456994050438915,0,0.407302655690628,0.581857461502877,0.210407459670956,0.632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.325929952884052,0.509235257325564,0,1.17254380209271,3.33261097240419,0.390267295715598,2.04925687338048,1.55025282754142,2.87018583583477,1.80249646187312,1.89953480052485,0.578596234326046,0,0,1.47529281905711,0.551873492609465,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0,0.727067458955011,0,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0.512612642393558,0,0.185194527369712,0.941842285023455,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.337912250981556,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.581385666529314,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p@chr11:78748924..78748935,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=94 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:78748924..78748935,+ | |||
|id=chr11:78748924..78748935,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005157!6.84e-12!27;UBERON:0005153!2.02e-10!17;UBERON:0002048!1.09e-09!14;UBERON:0000117!1.09e-09!14;UBERON:0000171!1.09e-09!14;UBERON:0000170!1.09e-09!14;UBERON:0005597!1.09e-09!14;UBERON:0000118!1.09e-09!14;UBERON:0009569!1.46e-08!66;UBERON:0004872!3.14e-08!33;UBERON:0005178!3.14e-07!17;UBERON:0005181!3.14e-07!17;UBERON:0002224!3.14e-07!17;UBERON:0000915!3.14e-07!17;UBERON:0008947!3.14e-07!17;UBERON:0003258!3.14e-07!17;UBERON:0007100!5.15e-07!18;UBERON:0000948!5.15e-07!18;UBERON:0005498!5.15e-07!18;UBERON:0004140!5.15e-07!18;UBERON:0009881!5.15e-07!18;UBERON:0004141!5.15e-07!18;UBERON:0003084!5.15e-07!18;UBERON:0007005!5.15e-07!18;UBERON:0004139!5.15e-07!18;UBERON:0004291!5.15e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,3.85e-27,17;UBERON:0002048,1.78e-25,14;UBERON:0000117,1.78e-25,14;UBERON:0000171,1.78e-25,14;UBERON:0000170,1.78e-25,14;UBERON:0005597,1.78e-25,14;UBERON:0000118,1.78e-25,14;UBERON:0005157,5.30e-23,20;UBERON:0005178,6.28e-21,17;UBERON:0005181,6.28e-21,17;UBERON:0002224,6.28e-21,17;UBERON:0000915,6.28e-21,17;UBERON:0008947,6.28e-21,17;UBERON:0003258,6.28e-21,17;UBERON:0000065,1.97e-08,41;UBERON:0001004,3.22e-08,42;UBERON:0001048,6.31e-07,134;UBERON:0000025,7.16e-07,114;UBERON:0007100,8.93e-07,18;UBERON:0000948,8.93e-07,18;UBERON:0005498,8.93e-07,18;UBERON:0004140,8.93e-07,18;UBERON:0009881,8.93e-07,18;UBERON:0004141,8.93e-07,18;UBERON:0003084,8.93e-07,18;UBERON:0007005,8.93e-07,18;UBERON:0004139,8.93e-07,18;UBERON:0004291,8.93e-07,18 | |||
|phase1_expression=0,0.348975407639361,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0.215471232685889,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0.117588707135705,0.879666139307728,0,0.722996784599558,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0.180062061461015,0.23674473558521,0.590292695242212,0.154267112887378,0.697601834251224,0.804820204198858,0.350296027101508,0.822799249567402,0.985004784474571,1.4592385718254,2.04679982395465,2.19550115291051,1.34206418760372,0,0,0,0,0.213288250535234,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0.456994050438915,0,0.407302655690628,0.581857461502877,0.210407459670956,0.632365371242573,0.442830443938806,0.31399745568275,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0.325929952884052,0.509235257325564,0,1.17254380209271,3.33261097240419,0.390267295715598,2.04925687338048,1.55025282754142,2.87018583583477,1.80249646187312,1.89953480052485,0.578596234326046,0,0,1.47529281905711,0.551873492609465,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0,0,0,0.727067458955011,0,0,0,0,0.680879211507576,0,0.129358683782755,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0,0.120625849856312,0.119372344003136,0,0,0,0.512612642393558,0,0.185194527369712,0.941842285023455,0.136694227721025,0.686334519619568,0,0,0,0,0,0,0,0.209088296014469,0.436725127492355,0.134864346384821,0,0,0,0,0,0.149516546043979,0,0,0,0.337912250981556,0,0.13020438484395,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0.581385666529314,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0,0.29551344712669,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr11:78748924..78748935,+ | |||
}} |
Revision as of 21:04, 12 September 2013
Short description: | p@chr11:78748924..78748935, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:78748924..78748935, + |
Coexpression cluster: | MCL_coexpression_mm9:94 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial bud | 3.85e-27 | 17 |
lung | 1.78e-25 | 14 |
respiratory tube | 1.78e-25 | 14 |
respiration organ | 1.78e-25 | 14 |
pair of lungs | 1.78e-25 | 14 |
lung primordium | 1.78e-25 | 14 |
lung bud | 1.78e-25 | 14 |
epithelial fold | 5.30e-23 | 20 |
thoracic cavity element | 6.28e-21 | 17 |
thoracic segment organ | 6.28e-21 | 17 |
thoracic cavity | 6.28e-21 | 17 |
thoracic segment of trunk | 6.28e-21 | 17 |
respiratory primordium | 6.28e-21 | 17 |
endoderm of foregut | 6.28e-21 | 17 |
respiratory tract | 1.97e-08 | 41 |
respiratory system | 3.22e-08 | 42 |
primordium | 6.31e-07 | 134 |
tube | 7.16e-07 | 114 |
primary circulatory organ | 8.93e-07 | 18 |
heart | 8.93e-07 | 18 |
primitive heart tube | 8.93e-07 | 18 |
primary heart field | 8.93e-07 | 18 |
anterior lateral plate mesoderm | 8.93e-07 | 18 |
heart tube | 8.93e-07 | 18 |
heart primordium | 8.93e-07 | 18 |
cardiac mesoderm | 8.93e-07 | 18 |
cardiogenic plate | 8.93e-07 | 18 |
heart rudiment | 8.93e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.