FFCP PHASE1:Mm9::chrX:98469445..98469487,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=59024|HGNC=|MCL_coexpression_id=123|UniProt=A2AGH6,Q2NLB9|association_with_transcript=15bp_to_NM_021521,uc009txe.1_5end|description=CAGE_peak_2_at_Med12_5end|id=chrX:98469445..98469487,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!8.08e-11!29;UBERON:0006562!4.11e-09!24;UBERON:0001557!4.11e-09!24;UBERON:0001042!4.11e-09!24;UBERON:0008814!4.11e-09!24;UBERON:0009145!4.11e-09!24;UBERON:0002370!6.47e-09!23;UBERON:0000974!6.47e-09!23;UBERON:0004807!6.47e-09!23;UBERON:0005058!6.47e-09!23;UBERON:0003351!6.47e-09!23;UBERON:0009113!6.47e-09!23;UBERON:0003295!6.47e-09!23;UBERON:0009722!6.47e-09!23;UBERON:0005562!6.47e-09!23;UBERON:0007690!6.47e-09!23;UBERON:0003408!1.40e-08!24;UBERON:0000065!6.62e-08!41;UBERON:0001004!9.75e-08!42|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.09e-11,35;UBERON:0004177,8.08e-11,29;UBERON:0005057,8.08e-11,29;UBERON:0006562,4.11e-09,24;UBERON:0001557,4.11e-09,24;UBERON:0001042,4.11e-09,24;UBERON:0008814,4.11e-09,24;UBERON:0009145,4.11e-09,24;UBERON:0002370,6.47e-09,23;UBERON:0000974,6.47e-09,23;UBERON:0004807,6.47e-09,23;UBERON:0005058,6.47e-09,23;UBERON:0003351,6.47e-09,23;UBERON:0009113,6.47e-09,23;UBERON:0003295,6.47e-09,23;UBERON:0009722,6.47e-09,23;UBERON:0005562,6.47e-09,23;UBERON:0007690,6.47e-09,23;UBERON:0003408,1.40e-08,24;UBERON:0000153,2.01e-08,43;UBERON:0000065,6.62e-08,41;UBERON:0001004,9.75e-08,42|phase1_expression=6.72625157840135,5.58360652222978,4.09499315450582,7.86406949397758,8.5152274090879,4.36486106970913,5.13947809310157,18.3355119287038,14.5012383816217,16.6185813688615,11.6428218393343,14.3589886191606,24.4817043801624,26.4009615305372,10.3264026162855,12.5534665781692,20.9868563438444,10.4102514568218,12.4774134581222,14.429248161133,6.20816018102809,7.84398514486994,3.39559725880616,4.31979541542198,2.52350209173887,4.01962374880514,1.7230479846363,2.80112602491656,4.94060890586572,5.79669298447841,3.32595765982957,9.52546010189447,11.6862309641068,15.8481681015439,5.48818077527422,3.32469290716985,4.08338712524738,13.393012183581,10.9386948233332,10.9939986234498,18.2351761289614,12.9778642142105,17.4783727091215,5.41356317294982,5.5757312170733,5.68994931701213,8.60630478782843,6.1047043786525,3.51497892375155,4.27745777963423,11.8988458381558,7.18762821824858,8.05356509077134,26.1130371124084,27.8957853288245,5.65970759279083,7.44986943840768,6.70373719960675,8.29497489524351,5.28990979272033,8.87363964908651,7.11573517345177,13.3394219416671,4.49949858640699,2.96659908770092,3.5524005747305,3.29560121570245,3.84218305321555,13.1685807631767,13.9056116481641,10.9368979902719,3.14216082844184,2.42955395046775,10.2892271340561,9.96792898589658,14.7075005857603,6.60695285996332,6.89511625660014,5.52983519722476,9.10015385338338,9.14876436024097,6.77187381723788,4.74611098302348,3.93933827022176,4.73674568108111,6.77645746589436,4.9830088279686,6.15118171223492,3.25622631332691,7.70829913089212,10.1452571045587,5.16254326188832,2.719885334831,2.69851595818909,3.24888208723835,4.48026887097336,6.31999890592883,5.45377032249785,3.11743205523443,5.3000936176551,5.35204995151386,5.13305909657271,5.09610479413291,7.11066703153331,4.11332977921307,3.54703811665138,4.04419556011827,3.53970027129086,33.144049106838,8.16431764856536,9.88866362566974,4.87144765299426,5.99600292865752,4.52167921657868,9.8774513993992,4.39833069653864,11.6181634835156,10.5557530551536,6.19227386364912,5.98537344805414,11.2629174414801,9.21262980956922,9.31958806090611,9.66176630138106,7.54008144528438,6.13096932500619,5.03223522924865,4.19931911695385,4.70159840170339,7.18995069143149,7.77751024791665,9.5497307605777,5.56237824615285,8.43861009190091,7.68815764870372,7.46309810111685,8.1471491080253,9.82815067819735,7.58168275301024,10.9429765060966,8.84819012146385,5.28774840196988,5.94205028357652,7.68594570962147,9.5251098811859,7.94305065766069,6.46541899462129,10.3481348295606,18.1077114063587,16.4522289746003,14.7798944297717,9.64461222681329,17.7950239504383,12.537077994798,12.1411460480687,6.96619933864726,2.80885274925294,3.86021860672073,4.83077948972507,6.00664740352955,7.73935997937617,7.02242039697958,9.46978942340841,7.67380503814875,5.707883176833,7.44108623201305,5.09719462659276,6.30532848782715,6.25327429671226,5.41752631461014,6.80978000185188,3.80119967305864,5.48875288227627,7.38135303182045,9.88362758251398,13.6863134464448,11.8950761874167,6.87571473325215,7.03851226766272,11.3795969211615,8.63411990858025,8.47070803418039,6.44896327150124,6.84812254005213,5.69434873853414,6.0938613247884,7.03738584640755,6.56556357735798,6.43381487493096,6.29173586057955,7.3486936957396,6.77080329064848,9.67306294860717,10.2823661348756,9.01661885384643,12.6263823264095,10.0855293327165,8.83711330618014,10.3075555512539,4.87113488332687,6.75094529717912,6.66344685177723,3.55743152504579,10.0107063429656,9.23827277032054,12.8171404059367,11.7658870405332,14.470629585145,12.731292589071,10.3570609482292,5.99900339067631,5.21666685057355,25.8782771749238,5.95425516269605,6.55279113540577,6.31447194867779,6.81710171383266,5.30687873499704,12.5632169313291,6.82169082373745,10.5927234687317,8.65699937453459,9.15291968325158,11.8929442783689,7.85544014923845,9.36641509717434,11.5073655197519,13.2878813789265,14.0320196418589,9.66793556822854,9.67035898449015,10.1254341007058,1.50791283939272,4.35124547054968,3.44234991113325,9.93372286697037,8.0275294993896,7.501547941901,10.3279015587306,6.31177318010932,8.51872192423893,7.41833614163613,6.03185513651837,9.55875191810208,8.68914828921337,10.4738316391868,9.71545684019746,7.59865230569411,7.11518000303742,8.35435422696698,8.80028528291265,12.2865266530406,10.4247653986289,8.90838664051691,1.32745138339963,7.52619972080442,8.46505959501303,3.96070667487386,7.67784921490009,7.68587869859819,8.26970538138308,5.45300594216258,7.48644494607915,7.26884543252377,4.21674434299995,5.15677716240934,8.17055053809091,8.8229936075342,8.14959707831353,8.57348140126369,9.22169214939823,11.4156043265325,9.54384319492302,6.69822888052118,12.9069439435041,12.2862601101016,8.82113592219848,21.2703266294509,15.0161916827192,13.8116598085477,13.6084472163576,13.1312719796049,5.53813589596716,6.86073617438886,14.8657666294132,9.28740905834501,10.1856990053341,14.8811081033706,12.7125631780553,14.4130249120109,9.5187920796559,8.95689294871411,8.56839837587428,3.81868247206045,11.0717597753397,9.75933442208874,7.45236851670429,8.99079672862215,8.07941485860857,4.98998081623837,8.59595939543494,5.23511883968059,8.42497326396654,8.07741107013003,1.12738587736838,8.97099276263873,7.1147150896552,8.5558522871381,5.8121920564979,7.43406952159424,9.74065080759758,8.20287624516886,12.1636839533825,3.62376181239009,2.88030006257865,27.4929674946515,8.31173382689673,11.6063381596255,14.2912905275575,18.0816962624156,21.4575863163766,22.1159627116743,17.7227432609493,23.7271157378147,24.69100535622,26.4164605058522,32.2585585248581,26.2658327678099,34.2449323391997,10.6563280299149,7.10355050797007,4.03712354742641,6.37961542183498,9.27310051354514,10.1348536743638,10.0733393346996,11.1471557121114,9.5298699766719,4.51801474093653,6.44455331110048,4.58316410751517,4.29632955859219,5.48066015816514,6.0431511791176,7.42524750254986,4.95353323546643,4.53142408984205,3.10656187051092,9.13328658740755,11.9707462020309,9.39034831647738,16.7743634777123,9.22297915563122,8.08911437180062,8.22312892865976,10.9198580336614,9.62757628775446,8.08631077644152,12.9274442944022,11.5062068245506,8.33409416481953,10.5001249943986,8.95993315707567,9.0495801343784,10.429589335037,11.9603716687497,9.89006161927936,9.71512872887022,11.3146853287187,8.5188386956482,9.53744759789284,10.174249164263,11.0107975085937,11.3383574574847,8.04883080640199,10.5227884575137,9.37048385536446,9.53941861818155,10.7957866492998,10.4414751318097,7.7753898202241,10.3807683594597,12.9247429357365,12.4905288968973,11.462648813825,10.5286816483666,9.18183993930448,10.1472052794977,6.26043156175138|short_description=p2@Med12}} | ||
|EntrezGene=59024 | |||
|HGNC= | |||
|MCL_coexpression_id=123 | |||
|UniProt=A2AGH6,Q2NLB9 | |||
|association_with_transcript=15bp_to_NM_021521,uc009txe.1_5end | |||
|description=CAGE_peak_2_at_Med12_5end | |||
|id=chrX:98469445..98469487,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!8.08e-11!29;UBERON:0006562!4.11e-09!24;UBERON:0001557!4.11e-09!24;UBERON:0001042!4.11e-09!24;UBERON:0008814!4.11e-09!24;UBERON:0009145!4.11e-09!24;UBERON:0002370!6.47e-09!23;UBERON:0000974!6.47e-09!23;UBERON:0004807!6.47e-09!23;UBERON:0005058!6.47e-09!23;UBERON:0003351!6.47e-09!23;UBERON:0009113!6.47e-09!23;UBERON:0003295!6.47e-09!23;UBERON:0009722!6.47e-09!23;UBERON:0005562!6.47e-09!23;UBERON:0007690!6.47e-09!23;UBERON:0003408!1.40e-08!24;UBERON:0000065!6.62e-08!41;UBERON:0001004!9.75e-08!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000077,1.09e-11,35;UBERON:0004177,8.08e-11,29;UBERON:0005057,8.08e-11,29;UBERON:0006562,4.11e-09,24;UBERON:0001557,4.11e-09,24;UBERON:0001042,4.11e-09,24;UBERON:0008814,4.11e-09,24;UBERON:0009145,4.11e-09,24;UBERON:0002370,6.47e-09,23;UBERON:0000974,6.47e-09,23;UBERON:0004807,6.47e-09,23;UBERON:0005058,6.47e-09,23;UBERON:0003351,6.47e-09,23;UBERON:0009113,6.47e-09,23;UBERON:0003295,6.47e-09,23;UBERON:0009722,6.47e-09,23;UBERON:0005562,6.47e-09,23;UBERON:0007690,6.47e-09,23;UBERON:0003408,1.40e-08,24;UBERON:0000153,2.01e-08,43;UBERON:0000065,6.62e-08,41;UBERON:0001004,9.75e-08,42 | |||
|phase1_expression=6.72625157840135,5.58360652222978,4.09499315450582,7.86406949397758,8.5152274090879,4.36486106970913,5.13947809310157,18.3355119287038,14.5012383816217,16.6185813688615,11.6428218393343,14.3589886191606,24.4817043801624,26.4009615305372,10.3264026162855,12.5534665781692,20.9868563438444,10.4102514568218,12.4774134581222,14.429248161133,6.20816018102809,7.84398514486994,3.39559725880616,4.31979541542198,2.52350209173887,4.01962374880514,1.7230479846363,2.80112602491656,4.94060890586572,5.79669298447841,3.32595765982957,9.52546010189447,11.6862309641068,15.8481681015439,5.48818077527422,3.32469290716985,4.08338712524738,13.393012183581,10.9386948233332,10.9939986234498,18.2351761289614,12.9778642142105,17.4783727091215,5.41356317294982,5.5757312170733,5.68994931701213,8.60630478782843,6.1047043786525,3.51497892375155,4.27745777963423,11.8988458381558,7.18762821824858,8.05356509077134,26.1130371124084,27.8957853288245,5.65970759279083,7.44986943840768,6.70373719960675,8.29497489524351,5.28990979272033,8.87363964908651,7.11573517345177,13.3394219416671,4.49949858640699,2.96659908770092,3.5524005747305,3.29560121570245,3.84218305321555,13.1685807631767,13.9056116481641,10.9368979902719,3.14216082844184,2.42955395046775,10.2892271340561,9.96792898589658,14.7075005857603,6.60695285996332,6.89511625660014,5.52983519722476,9.10015385338338,9.14876436024097,6.77187381723788,4.74611098302348,3.93933827022176,4.73674568108111,6.77645746589436,4.9830088279686,6.15118171223492,3.25622631332691,7.70829913089212,10.1452571045587,5.16254326188832,2.719885334831,2.69851595818909,3.24888208723835,4.48026887097336,6.31999890592883,5.45377032249785,3.11743205523443,5.3000936176551,5.35204995151386,5.13305909657271,5.09610479413291,7.11066703153331,4.11332977921307,3.54703811665138,4.04419556011827,3.53970027129086,33.144049106838,8.16431764856536,9.88866362566974,4.87144765299426,5.99600292865752,4.52167921657868,9.8774513993992,4.39833069653864,11.6181634835156,10.5557530551536,6.19227386364912,5.98537344805414,11.2629174414801,9.21262980956922,9.31958806090611,9.66176630138106,7.54008144528438,6.13096932500619,5.03223522924865,4.19931911695385,4.70159840170339,7.18995069143149,7.77751024791665,9.5497307605777,5.56237824615285,8.43861009190091,7.68815764870372,7.46309810111685,8.1471491080253,9.82815067819735,7.58168275301024,10.9429765060966,8.84819012146385,5.28774840196988,5.94205028357652,7.68594570962147,9.5251098811859,7.94305065766069,6.46541899462129,10.3481348295606,18.1077114063587,16.4522289746003,14.7798944297717,9.64461222681329,17.7950239504383,12.537077994798,12.1411460480687,6.96619933864726,2.80885274925294,3.86021860672073,4.83077948972507,6.00664740352955,7.73935997937617,7.02242039697958,9.46978942340841,7.67380503814875,5.707883176833,7.44108623201305,5.09719462659276,6.30532848782715,6.25327429671226,5.41752631461014,6.80978000185188,3.80119967305864,5.48875288227627,7.38135303182045,9.88362758251398,13.6863134464448,11.8950761874167,6.87571473325215,7.03851226766272,11.3795969211615,8.63411990858025,8.47070803418039,6.44896327150124,6.84812254005213,5.69434873853414,6.0938613247884,7.03738584640755,6.56556357735798,6.43381487493096,6.29173586057955,7.3486936957396,6.77080329064848,9.67306294860717,10.2823661348756,9.01661885384643,12.6263823264095,10.0855293327165,8.83711330618014,10.3075555512539,4.87113488332687,6.75094529717912,6.66344685177723,3.55743152504579,10.0107063429656,9.23827277032054,12.8171404059367,11.7658870405332,14.470629585145,12.731292589071,10.3570609482292,5.99900339067631,5.21666685057355,25.8782771749238,5.95425516269605,6.55279113540577,6.31447194867779,6.81710171383266,5.30687873499704,12.5632169313291,6.82169082373745,10.5927234687317,8.65699937453459,9.15291968325158,11.8929442783689,7.85544014923845,9.36641509717434,11.5073655197519,13.2878813789265,14.0320196418589,9.66793556822854,9.67035898449015,10.1254341007058,1.50791283939272,4.35124547054968,3.44234991113325,9.93372286697037,8.0275294993896,7.501547941901,10.3279015587306,6.31177318010932,8.51872192423893,7.41833614163613,6.03185513651837,9.55875191810208,8.68914828921337,10.4738316391868,9.71545684019746,7.59865230569411,7.11518000303742,8.35435422696698,8.80028528291265,12.2865266530406,10.4247653986289,8.90838664051691,1.32745138339963,7.52619972080442,8.46505959501303,3.96070667487386,7.67784921490009,7.68587869859819,8.26970538138308,5.45300594216258,7.48644494607915,7.26884543252377,4.21674434299995,5.15677716240934,8.17055053809091,8.8229936075342,8.14959707831353,8.57348140126369,9.22169214939823,11.4156043265325,9.54384319492302,6.69822888052118,12.9069439435041,12.2862601101016,8.82113592219848,21.2703266294509,15.0161916827192,13.8116598085477,13.6084472163576,13.1312719796049,5.53813589596716,6.86073617438886,14.8657666294132,9.28740905834501,10.1856990053341,14.8811081033706,12.7125631780553,14.4130249120109,9.5187920796559,8.95689294871411,8.56839837587428,3.81868247206045,11.0717597753397,9.75933442208874,7.45236851670429,8.99079672862215,8.07941485860857,4.98998081623837,8.59595939543494,5.23511883968059,8.42497326396654,8.07741107013003,1.12738587736838,8.97099276263873,7.1147150896552,8.5558522871381,5.8121920564979,7.43406952159424,9.74065080759758,8.20287624516886,12.1636839533825,3.62376181239009,2.88030006257865,27.4929674946515,8.31173382689673,11.6063381596255,14.2912905275575,18.0816962624156,21.4575863163766,22.1159627116743,17.7227432609493,23.7271157378147,24.69100535622,26.4164605058522,32.2585585248581,26.2658327678099,34.2449323391997,10.6563280299149,7.10355050797007,4.03712354742641,6.37961542183498,9.27310051354514,10.1348536743638,10.0733393346996,11.1471557121114,9.5298699766719,4.51801474093653,6.44455331110048,4.58316410751517,4.29632955859219,5.48066015816514,6.0431511791176,7.42524750254986,4.95353323546643,4.53142408984205,3.10656187051092,9.13328658740755,11.9707462020309,9.39034831647738,16.7743634777123,9.22297915563122,8.08911437180062,8.22312892865976,10.9198580336614,9.62757628775446,8.08631077644152,12.9274442944022,11.5062068245506,8.33409416481953,10.5001249943986,8.95993315707567,9.0495801343784,10.429589335037,11.9603716687497,9.89006161927936,9.71512872887022,11.3146853287187,8.5188386956482,9.53744759789284,10.174249164263,11.0107975085937,11.3383574574847,8.04883080640199,10.5227884575137,9.37048385536446,9.53941861818155,10.7957866492998,10.4414751318097,7.7753898202241,10.3807683594597,12.9247429357365,12.4905288968973,11.462648813825,10.5286816483666,9.18183993930448,10.1472052794977,6.26043156175138 | |||
|short_description=p2@Med12 | |||
}} |
Revision as of 20:20, 14 September 2013
Short description: | p2@Med12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Med12_5end |
Coexpression cluster: | MCL_coexpression_mm9:123 |
Association with transcript: | 15bp_to_NM_021521, uc009txe.1_5end |
EntrezGene: | Med12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mixed endoderm/mesoderm-derived structure | 1.09e-11 | 35 |
hemopoietic organ | 8.08e-11 | 29 |
immune organ | 8.08e-11 | 29 |
pharynx | 4.11e-09 | 24 |
upper respiratory tract | 4.11e-09 | 24 |
chordate pharynx | 4.11e-09 | 24 |
pharyngeal arch system | 4.11e-09 | 24 |
pharyngeal region of foregut | 4.11e-09 | 24 |
thymus | 6.47e-09 | 23 |
neck | 6.47e-09 | 23 |
respiratory system epithelium | 6.47e-09 | 23 |
hemolymphoid system gland | 6.47e-09 | 23 |
pharyngeal epithelium | 6.47e-09 | 23 |
thymic region | 6.47e-09 | 23 |
pharyngeal gland | 6.47e-09 | 23 |
entire pharyngeal arch endoderm | 6.47e-09 | 23 |
thymus primordium | 6.47e-09 | 23 |
early pharyngeal endoderm | 6.47e-09 | 23 |
gland of gut | 1.40e-08 | 24 |
anterior region of body | 2.01e-08 | 43 |
respiratory tract | 6.62e-08 | 41 |
respiratory system | 9.75e-08 | 42 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.