FFCP PHASE1:Hg19::chr1:34630779..34630790,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=114784 | |EntrezGene=114784 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19290 | |HGNC=19290 | ||
|TSSclassifier=S | |||
|UniProt=E7EUA6,Q53TY4 | |UniProt=E7EUA6,Q53TY4 | ||
|association_with_transcript=84bp_to_ENST00000373381,uc001bxm.1_5end | |association_with_transcript=84bp_to_ENST00000373381,uc001bxm.1_5end |
Revision as of 16:47, 5 July 2013
Short description: | p4@CSMD2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_CSMD2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 84bp_to_ENST00000373381, uc001bxm.1_5end |
EntrezGene: | CSMD2 |
HGNC: | 19290 |
UniProt: | E7EUA6Q53TY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@CSMD2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.10e-17 | 8 |
neuron | 7.65e-12 | 6 |
neuroblast | 7.65e-12 | 6 |
electrically signaling cell | 7.65e-12 | 6 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
brain grey matter | 5.72e-40 | 34 |
gray matter | 5.72e-40 | 34 |
cerebral hemisphere | 7.17e-39 | 32 |
central nervous system | 8.69e-39 | 81 |
telencephalon | 2.84e-36 | 34 |
nervous system | 4.98e-36 | 89 |
regional part of telencephalon | 1.60e-35 | 32 |
neural tube | 2.30e-33 | 56 |
neural rod | 2.30e-33 | 56 |
future spinal cord | 2.30e-33 | 56 |
Showing 1 to 10 of 54 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.