FFCP PHASE1:Hg19::chr10:50818275..50818286,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6572 | |EntrezGene=6572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10936 | |HGNC=10936 | ||
|TSSclassifier=S | |||
|UniProt=Q16572 | |UniProt=Q16572 | ||
|association_with_transcript=-60bp_to_ENST00000374115,NM_003055,uc001jhw.2_5end | |association_with_transcript=-60bp_to_ENST00000374115,NM_003055,uc001jhw.2_5end |
Revision as of 01:30, 6 July 2013
Short description: | p6@SLC18A3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SLC18A3_5end |
Coexpression cluster: | C1313_Placental_mesothelioma_amniotic_neuroectodermal_renal_chorionic_carcinosarcoma |
Association with transcript: | -60bp_to_ENST00000374115, NM_003055, uc001jhw.2_5end |
EntrezGene: | SLC18A3 |
HGNC: | 10936 |
UniProt: | Q16572 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@SLC18A3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 8.37e-39 | 3 |
extraembryonic cell | 2.77e-24 | 19 |
amnion mesenchymal stem cell | 2.02e-23 | 5 |
Showing 1 to 3 of 3 entries
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.05e-32 | 14 |
membranous layer | 1.05e-32 | 14 |
placenta | 2.06e-29 | 4 |
allantois | 2.06e-29 | 4 |
extraembryonic structure | 2.33e-19 | 24 |
chorion | 2.67e-17 | 7 |
amnion | 4.73e-17 | 7 |
somatic layer of lateral plate mesoderm | 4.69e-15 | 8 |
organ component layer | 2.37e-07 | 66 |
Showing 1 to 9 of 9 entries
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.98e-12 | 10 |
Showing 1 to 1 of 1 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.