FFCP PHASE1:Hg19::chr12:53535758..53535789,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=22804 | |HGNC=22804 | ||
|TSSclassifier=W | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000550979_5end | |association_with_transcript=-47bp_to_ENST00000550979_5end | ||
Revision as of 12:05, 6 July 2013
| Short description: | p1@HIGD1AP1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_HIGD1AP1_5end |
| Coexpression cluster: | C1019_occipital_medial_amygdala_caudate_hippocampus_cerebellum_parietal |
| Association with transcript: | -47bp_to_ENST00000550979_5end |
| EntrezGene: | NA |
| HGNC: | 22804 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@HIGD1AP1 |
|---|
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| defensive cell | 6.00e-15 | 48 |
| phagocyte | 6.00e-15 | 48 |
| classical monocyte | 6.97e-14 | 42 |
| CD14-positive, CD16-negative classical monocyte | 6.97e-14 | 42 |
| myeloid lineage restricted progenitor cell | 1.65e-12 | 66 |
| granulocyte monocyte progenitor cell | 6.22e-12 | 67 |
| macrophage dendritic cell progenitor | 8.35e-12 | 61 |
| monopoietic cell | 2.25e-10 | 59 |
| monocyte | 2.25e-10 | 59 |
| monoblast | 2.25e-10 | 59 |
| Ontology term | p-value | n |
|---|---|---|
| larynx | 6.67e-13 | 9 |
| bone marrow | 2.11e-10 | 76 |
| skeletal element | 3.62e-09 | 90 |
| bone element | 5.03e-09 | 82 |
| immune system | 2.49e-08 | 93 |
| skeletal system | 2.15e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
