FFCP PHASE1:Hg19::chr1:25562748..25562750,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:25562748..25562750,-|id=chr1:25562748..25562750,-|ontology_enrichment_celltype=CL:0002032!3.28e-10!165;CL:0000837!3.28e-10!165;CL:0000037!3.77e-09!172;CL:0000566!3.77e-09!172;CL:0000988!1.09e-08!182;CL:0002031!4.87e-08!124;CL:0002087!2.64e-07!119|ontology_enrichment_celltype_v019=CL:0002127;2.05e-13;1!CL:0000911;2.05e-13;1!CL:0000814;2.05e-13;1!CL:0000946;5.37e-13;1!CL:0000817;5.37e-13;1!CL:0000786;5.37e-13;1!CL:0000047;3.92e-07;2!CL:0002097;3.92e-07;2|ontology_enrichment_celltype_v019_2=CL:0000817,2.58e-16,3;CL:0002127,1.82e-13,1;CL:0000914,1.82e-13,1;CL:0000911,1.82e-13,1;CL:0000814,1.82e-13,1;CL:0002042,1.82e-13,1;CL:0002039,1.82e-13,1;CL:0002040,1.82e-13,1;CL:0002041,1.82e-13,1;CL:0000946,7.68e-13,1;CL:0000786,7.68e-13,1;CL:0000980,7.68e-13,1;CL:0000893,2.28e-07,2;CL:0002489,2.28e-07,2;CL:0000809,2.28e-07,2;CL:0000808,2.28e-07,2;CL:0000894,2.28e-07,2;CL:0000806,2.28e-07,2;CL:0000807,2.28e-07,2;CL:0000805,2.28e-07,2;CL:0002425,2.28e-07,2;CL:0002097,3.09e-07,2;CL:0000785,4.69e-07,2;CL:0000955,4.69e-07,2;CL:0000818,4.69e-07,2;CL:0000954,4.69e-07,2;CL:0000816,4.69e-07,2|ontology_enrichment_development_v019=CL:0002425;2.43e-07;2!CL:0000954;3.92e-07;2|ontology_enrichment_disease=DOID:14566!4.29e-27!239;DOID:162!8.58e-27!235;DOID:0050687!1.14e-17!143;DOID:0050686!5.24e-13!137;DOID:305!3.08e-12!106;DOID:2531!3.54e-08!51;DOID:0060083!3.54e-08!51;DOID:1240!1.39e-07!39;DOID:3119!5.18e-07!14|ontology_enrichment_disease_v019=DOID:1240;4.57e-08;39!DOID:4231;3.92e-07;2!DOID:1907;3.92e-07;2|ontology_enrichment_disease_v019_2=DOID:1240,1.66e-10,39;DOID:2531,6.06e-08,51;DOID:0060083,6.06e-08,51;DOID:162,7.02e-08,235;DOID:14566,1.13e-07,239;DOID:0050686,3.38e-07,137;DOID:4231,4.98e-07,2;DOID:1907,4.98e-07,2|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0.30120591877825,0,0.232401601740905,0,0,0,0,0,0,0,0,0.436194716338694,0.377875943688809,0,0.464858073811369,0,0.619412741790207,0.28769239232215,0.512321413058201,0,0,1.29096936716765,0,0.752969358170419,0.545812300115692,0,0.918251677112708,0,0.639337125799041,0,0.398927315243264,0.852449501065388,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80212859983818,0.394061520403854,0.431255149719035,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.371606350251437,1.15415370381156,0.284567373393656,0.478278818186467,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,1.18504244461122,0,0,0.851692475380653,1.37402137902306,0,0,0,0,0,1.23087398947712,0.270455678475983,0.33307196799782,0,0,0,0,0.334330152832435,0,0,0,0.307160702099232,0,0,1.78093928036649,0,5.06700979507184,0,0,0,0.102268682502155,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0,0.254253650292766,0,0,2.62444152044929,0.347249989866585,0,0,0,0,0,0,0.32681539055697,0.83654246567162,0,0.455768223388005,0.23056390438806,0,0,0.638002319463839,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,1.58936578980379,0,0.979396848954886,0.989471500037586,0.216388639742091,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0.182454789215666,0,0.728341138602278,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0.569219092059585,0,0.347119476670262,0.489961987071888,0.0870592065804026,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0.685209623233754,0,0.0633107959558787,0,0.320635281006135,0,0.599428828746391,0.432271251462318,0.114536596165916,0,0.28810959597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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:25562748..25562750,- | |||
|id=chr1:25562748..25562750,- | |||
|ontology_enrichment_celltype=CL:0002032!3.28e-10!165;CL:0000837!3.28e-10!165;CL:0000037!3.77e-09!172;CL:0000566!3.77e-09!172;CL:0000988!1.09e-08!182;CL:0002031!4.87e-08!124;CL:0002087!2.64e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002127;2.05e-13;1!CL:0000911;2.05e-13;1!CL:0000814;2.05e-13;1!CL:0000946;5.37e-13;1!CL:0000817;5.37e-13;1!CL:0000786;5.37e-13;1!CL:0000047;3.92e-07;2!CL:0002097;3.92e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,2.58e-16,3;CL:0002127,1.82e-13,1;CL:0000914,1.82e-13,1;CL:0000911,1.82e-13,1;CL:0000814,1.82e-13,1;CL:0002042,1.82e-13,1;CL:0002039,1.82e-13,1;CL:0002040,1.82e-13,1;CL:0002041,1.82e-13,1;CL:0000946,7.68e-13,1;CL:0000786,7.68e-13,1;CL:0000980,7.68e-13,1;CL:0000893,2.28e-07,2;CL:0002489,2.28e-07,2;CL:0000809,2.28e-07,2;CL:0000808,2.28e-07,2;CL:0000894,2.28e-07,2;CL:0000806,2.28e-07,2;CL:0000807,2.28e-07,2;CL:0000805,2.28e-07,2;CL:0002425,2.28e-07,2;CL:0002097,3.09e-07,2;CL:0000785,4.69e-07,2;CL:0000955,4.69e-07,2;CL:0000818,4.69e-07,2;CL:0000954,4.69e-07,2;CL:0000816,4.69e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002425;2.43e-07;2!CL:0000954;3.92e-07;2 | |||
|ontology_enrichment_disease=DOID:14566!4.29e-27!239;DOID:162!8.58e-27!235;DOID:0050687!1.14e-17!143;DOID:0050686!5.24e-13!137;DOID:305!3.08e-12!106;DOID:2531!3.54e-08!51;DOID:0060083!3.54e-08!51;DOID:1240!1.39e-07!39;DOID:3119!5.18e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1240;4.57e-08;39!DOID:4231;3.92e-07;2!DOID:1907;3.92e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.66e-10,39;DOID:2531,6.06e-08,51;DOID:0060083,6.06e-08,51;DOID:162,7.02e-08,235;DOID:14566,1.13e-07,239;DOID:0050686,3.38e-07,137;DOID:4231,4.98e-07,2;DOID:1907,4.98e-07,2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0.30120591877825,0,0.232401601740905,0,0,0,0,0,0,0,0,0.436194716338694,0.377875943688809,0,0.464858073811369,0,0.619412741790207,0.28769239232215,0.512321413058201,0,0,1.29096936716765,0,0.752969358170419,0.545812300115692,0,0.918251677112708,0,0.639337125799041,0,0.398927315243264,0.852449501065388,0.290209238628584,0,0,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516833518338658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80212859983818,0.394061520403854,0.431255149719035,0.128343036279748,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.784306353074702,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.371606350251437,1.15415370381156,0.284567373393656,0.478278818186467,0,0.191505370132367,0.211673582723883,0,0,0.228234679033192,0,0,1.18504244461122,0,0,0.851692475380653,1.37402137902306,0,0,0,0,0,1.23087398947712,0.270455678475983,0.33307196799782,0,0,0,0,0.334330152832435,0,0,0,0.307160702099232,0,0,1.78093928036649,0,5.06700979507184,0,0,0,0.102268682502155,0.246169610922139,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0.437299999980979,0,0,0.254253650292766,0,0,2.62444152044929,0.347249989866585,0,0,0,0,0,0,0.32681539055697,0.83654246567162,0,0.455768223388005,0.23056390438806,0,0,0.638002319463839,0,0,0,0,0.166211681900156,0,0,0,0.189753732724185,1.58936578980379,0,0.979396848954886,0.989471500037586,0.216388639742091,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0.182454789215666,0,0.728341138602278,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0,0,0.569219092059585,0,0.347119476670262,0.489961987071888,0.0870592065804026,0,0.171986032471617,0,0.0730893170861856,0,0,0,0,0.685209623233754,0,0.0633107959558787,0,0.320635281006135,0,0.599428828746391,0.432271251462318,0.114536596165916,0,0.288109595976299,0.745515213392595,0,0,0.209205692624666,0.509991088181609,0,0,0.136905378891993,0,0,0.788662062837943,0,0,0,0.199679000498991,0,0,0,0.360299883542404,0,0,0,0,0.196854963029498,0.592713324460491,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.211200673038813,0,0.959575986597226,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,1.02652102730598,0,0,0,0,0,0.197611631897944,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0.691743174681154,0.124980407962107,0.758245587708239,0.856396000634902,0.470531639396343,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,1.50109113962448,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0.163565394255844,0.655219697692825,0.491545817507439,0.422624246717254,0.19998739585493,0.106691729694141,0,0,1.10463570151104,0,0,0.127894371303652,0.107824811396682,0.314531883711793,0.218419276384028,0,2.33832412111851,0.371807292777007,0,0,0.23658523500376,0,0,0.3062454773532,0,0,0,0,0,0,0.161475645631851,0,0.392590874004102,0.589848616738702,0,0.115525666150338,0.762764190934334,0,0.795664888465099,0,0.60511520611056,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15233987555779,0.171488009437418,0,0,0.709163045303809,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0,0,0,0.464965701472501,0.521574816907738,0,0,0,0,0,0.118332000730565,0.255640214277473,0,0,0,0,0,0.392600934460972,0.121917924982269,0.647428837187895,0,0,0,0,0.596852325484105,0,0.33883824611688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,1.05868461514708,0,0,0,0,0.315543124386369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0.332660356546013,0.89543595472072,0.213454691755431,0,0.718601616852695,0,0,0,0,0,0.641136984606466 | |||
|short_description=p@chr1:25562748..25562750,- | |||
}} |
Revision as of 04:53, 12 September 2013
Short description: | p@chr1:25562748..25562750, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:25562748..25562750, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 2.58e-16 | 3 |
innate effector T cell | 1.82e-13 | 1 |
immature NK T cell | 1.82e-13 | 1 |
effector T cell | 1.82e-13 | 1 |
mature NK T cell | 1.82e-13 | 1 |
immature NK T cell stage IV | 1.82e-13 | 1 |
immature NK T cell stage I | 1.82e-13 | 1 |
immature NK T cell stage II | 1.82e-13 | 1 |
immature NK T cell stage III | 1.82e-13 | 1 |
antibody secreting cell | 7.68e-13 | 1 |
plasma cell | 7.68e-13 | 1 |
plasmablast | 7.68e-13 | 1 |
thymocyte | 2.28e-07 | 2 |
double negative thymocyte | 2.28e-07 | 2 |
double-positive, alpha-beta thymocyte | 2.28e-07 | 2 |
DN4 thymocyte | 2.28e-07 | 2 |
DN1 thymic pro-T cell | 2.28e-07 | 2 |
DN2 thymocyte | 2.28e-07 | 2 |
DN3 thymocyte | 2.28e-07 | 2 |
immature single positive thymocyte | 2.28e-07 | 2 |
early T lineage precursor | 2.28e-07 | 2 |
cortical cell of adrenal gland | 3.09e-07 | 2 |
mature B cell | 4.69e-07 | 2 |
pre-B-II cell | 4.69e-07 | 2 |
transitional stage B cell | 4.69e-07 | 2 |
small pre-B-II cell | 4.69e-07 | 2 |
immature B cell | 4.69e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.66e-10 | 39 |
hematologic cancer | 6.06e-08 | 51 |
immune system cancer | 6.06e-08 | 51 |
cancer | 7.02e-08 | 235 |
disease of cellular proliferation | 1.13e-07 | 239 |
organ system cancer | 3.38e-07 | 137 |
histiocytoma | 4.98e-07 | 2 |
malignant fibroxanthoma | 4.98e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.