FFCP PHASE1:Hg19::chr1:158985723..158985746,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3428|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=5395|TSSclassifier=N|UniProt=|association_with_transcript=260bp_to_ENST00000474473_5end|coexpression_cluster_id=C7|description=CAGE_peak_20_at_IFI16_5end|id=chr1:158985723..158985746,+|ontology_enrichment_celltype=CL:0000839!7.87e-14!70;CL:0000557!1.84e-13!71;CL:0002194!1.09e-12!63;CL:0000576!1.09e-12!63;CL:0000040!1.09e-12!63;CL:0000559!1.09e-12!63;CL:0002057!5.06e-12!42;CL:0002009!5.84e-12!65;CL:0000766!8.83e-12!76;CL:0002031!2.20e-11!124;CL:0002087!3.84e-11!119;CL:0000738!1.17e-10!140;CL:0000860!1.18e-10!45;CL:0002032!1.22e-07!165;CL:0000837!1.22e-07!165;CL:0000037!1.38e-07!172;CL:0000566!1.38e-07!172;CL:0000988!4.02e-07!182;CL:0000763!6.42e-07!112;CL:0000049!6.42e-07!112|ontology_enrichment_celltype_v019=CL:0000473;1.07e-28;39!CL:0000234;1.07e-28;39!CL:0000860;7.10e-28;33!CL:0002057;7.10e-28;33!CL:0000576;1.59e-15;48!CL:0000766;1.97e-11;69!CL:0000235;7.72e-08;6!CL:0000763;9.72e-08;100|ontology_enrichment_celltype_v019_2=CL:0000473,5.27e-30,48;CL:0000234,5.27e-30,48;CL:0000839,9.28e-25,66;CL:0000557,2.28e-24,67;CL:0000860,5.74e-24,42;CL:0002057,5.74e-24,42;CL:0002194,1.14e-23,59;CL:0000576,1.14e-23,59;CL:0000040,1.14e-23,59;CL:0000559,1.14e-23,59;CL:0002009,7.47e-23,61;CL:0000766,1.43e-22,72;CL:0002031,4.99e-15,120;CL:0000763,1.72e-14,108;CL:0000049,1.72e-14,108;CL:0002087,1.81e-13,115;CL:0000738,4.98e-13,136;CL:0002032,1.09e-10,161;CL:0000837,1.09e-10,161;CL:0000037,3.69e-10,168;CL:0000988,1.55e-09,177;CL:0000235,7.33e-08,6|ontology_enrichment_development_v019=CL:0002057;6.28e-19;42!UBERON:0010227;1.32e-11;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;5.93e-12;1!DOID:4549;5.93e-12;1!DOID:5861;5.93e-12;1!DOID:6496;5.93e-12;1|ontology_enrichment_disease_v019_2=DOID:3371,5.62e-12,1;DOID:4549,5.62e-12,1;DOID:5861,5.62e-12,1;DOID:6496,5.62e-12,1|ontology_enrichment_uberon=UBERON:0001474!1.73e-13!86;UBERON:0002390!1.89e-12!102;UBERON:0003061!1.89e-12!102;UBERON:0002371!2.24e-12!80;UBERON:0002193!1.71e-11!112;UBERON:0004765!1.89e-11!101;UBERON:0001434!1.89e-11!101;UBERON:0002405!4.16e-10!115|ontology_enrichment_uberon_v019=UBERON:0002079;1.32e-11;1!UBERON:0007195;1.32e-11;1|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.04e-26,82;UBERON:0002371,8.75e-25,76;UBERON:0004765,6.54e-24,90;UBERON:0001434,2.47e-21,100;UBERON:0002405,6.11e-20,93;UBERON:0002390,7.86e-19,98;UBERON:0003061,7.86e-19,98;UBERON:0002193,6.47e-17,108;UBERON:0002204,6.00e-12,167;UBERON:0002079,1.32e-11,1;UBERON:0007195,1.63e-11,1;UBERON:0003081,2.07e-09,203|phase1_expression=0,0,0.281908808191942,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.152826811495903,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0.411167888021826,0.309706370895104,5.46615545412086,6.40401766322752,11.5876292645407,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0,0.320929027076094,0.639337125799041,6.92687730392104,7.38015533200038,2.98357325372886,0.870627715885752,0,0,9.04495194924276,6.25779502104242,8.25317609879443,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0.209658645508376,0,0.150176892841506,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0.97364218096405,0,0.398873881556595,0,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0,0.149448680551801,0,0,0,0,0,0.206651562351531,0,0,0,0,0,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0,0.252433774244115,0.184099797284599,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0.185176890317059,0,0,0,0,0,0,0,0.190254152234598,0,0,1.47730203652438,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,1.47798971368783,0.176096868026452,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0.239624855491583,0,0,0,0.205476322550383,0,0.224170287987055,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0.0852266274161009,0,0.330569830721956,0,0.255225424989168,0.30347334256665,0,0,0,0.308033580176089,0,0,0,0,0.3721583693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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3428 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5395 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=260bp_to_ENST00000474473_5end | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_20_at_IFI16_5end | |||
|id=chr1:158985723..158985746,+ | |||
|ontology_enrichment_celltype=CL:0000839!7.87e-14!70;CL:0000557!1.84e-13!71;CL:0002194!1.09e-12!63;CL:0000576!1.09e-12!63;CL:0000040!1.09e-12!63;CL:0000559!1.09e-12!63;CL:0002057!5.06e-12!42;CL:0002009!5.84e-12!65;CL:0000766!8.83e-12!76;CL:0002031!2.20e-11!124;CL:0002087!3.84e-11!119;CL:0000738!1.17e-10!140;CL:0000860!1.18e-10!45;CL:0002032!1.22e-07!165;CL:0000837!1.22e-07!165;CL:0000037!1.38e-07!172;CL:0000566!1.38e-07!172;CL:0000988!4.02e-07!182;CL:0000763!6.42e-07!112;CL:0000049!6.42e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.07e-28;39!CL:0000234;1.07e-28;39!CL:0000860;7.10e-28;33!CL:0002057;7.10e-28;33!CL:0000576;1.59e-15;48!CL:0000766;1.97e-11;69!CL:0000235;7.72e-08;6!CL:0000763;9.72e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.27e-30,48;CL:0000234,5.27e-30,48;CL:0000839,9.28e-25,66;CL:0000557,2.28e-24,67;CL:0000860,5.74e-24,42;CL:0002057,5.74e-24,42;CL:0002194,1.14e-23,59;CL:0000576,1.14e-23,59;CL:0000040,1.14e-23,59;CL:0000559,1.14e-23,59;CL:0002009,7.47e-23,61;CL:0000766,1.43e-22,72;CL:0002031,4.99e-15,120;CL:0000763,1.72e-14,108;CL:0000049,1.72e-14,108;CL:0002087,1.81e-13,115;CL:0000738,4.98e-13,136;CL:0002032,1.09e-10,161;CL:0000837,1.09e-10,161;CL:0000037,3.69e-10,168;CL:0000988,1.55e-09,177;CL:0000235,7.33e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;6.28e-19;42!UBERON:0010227;1.32e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;5.93e-12;1!DOID:4549;5.93e-12;1!DOID:5861;5.93e-12;1!DOID:6496;5.93e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.62e-12,1;DOID:4549,5.62e-12,1;DOID:5861,5.62e-12,1;DOID:6496,5.62e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001474!1.73e-13!86;UBERON:0002390!1.89e-12!102;UBERON:0003061!1.89e-12!102;UBERON:0002371!2.24e-12!80;UBERON:0002193!1.71e-11!112;UBERON:0004765!1.89e-11!101;UBERON:0001434!1.89e-11!101;UBERON:0002405!4.16e-10!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.32e-11;1!UBERON:0007195;1.32e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,2.04e-26,82;UBERON:0002371,8.75e-25,76;UBERON:0004765,6.54e-24,90;UBERON:0001434,2.47e-21,100;UBERON:0002405,6.11e-20,93;UBERON:0002390,7.86e-19,98;UBERON:0003061,7.86e-19,98;UBERON:0002193,6.47e-17,108;UBERON:0002204,6.00e-12,167;UBERON:0002079,1.32e-11,1;UBERON:0007195,1.63e-11,1;UBERON:0003081,2.07e-09,203 | |||
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| |||
|short_description=p20@IFI16 | |||
}} |
Revision as of 01:06, 12 September 2013
Short description: | p20@IFI16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_IFI16_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 260bp_to_ENST00000474473_5end |
EntrezGene: | IFI16 |
HGNC: | 5395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.27e-30 | 48 |
phagocyte | 5.27e-30 | 48 |
myeloid lineage restricted progenitor cell | 9.28e-25 | 66 |
granulocyte monocyte progenitor cell | 2.28e-24 | 67 |
classical monocyte | 5.74e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.74e-24 | 42 |
monopoietic cell | 1.14e-23 | 59 |
monocyte | 1.14e-23 | 59 |
monoblast | 1.14e-23 | 59 |
promonocyte | 1.14e-23 | 59 |
macrophage dendritic cell progenitor | 7.47e-23 | 61 |
myeloid leukocyte | 1.43e-22 | 72 |
hematopoietic lineage restricted progenitor cell | 4.99e-15 | 120 |
myeloid cell | 1.72e-14 | 108 |
common myeloid progenitor | 1.72e-14 | 108 |
nongranular leukocyte | 1.81e-13 | 115 |
leukocyte | 4.98e-13 | 136 |
hematopoietic oligopotent progenitor cell | 1.09e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-10 | 161 |
hematopoietic stem cell | 3.69e-10 | 168 |
hematopoietic cell | 1.55e-09 | 177 |
macrophage | 7.33e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
bone element | 2.04e-26 | 82 |
bone marrow | 8.75e-25 | 76 |
skeletal element | 6.54e-24 | 90 |
skeletal system | 2.47e-21 | 100 |
immune system | 6.11e-20 | 93 |
hematopoietic system | 7.86e-19 | 98 |
blood island | 7.86e-19 | 98 |
hemolymphoid system | 6.47e-17 | 108 |
musculoskeletal system | 6.00e-12 | 167 |
left cardiac atrium | 1.32e-11 | 1 |
stroma of bone marrow | 1.63e-11 | 1 |
lateral plate mesoderm | 2.07e-09 | 203 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.62e-12 | 1 |
extraosseous chondrosarcoma | 5.62e-12 | 1 |
myxoid chondrosarcoma | 5.62e-12 | 1 |
extraskeletal myxoid chondrosarcoma | 5.62e-12 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.