FFCP PHASE1:Hg19::chr1:159174623..159174628,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2532|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4035|TSSclassifier=S|UniProt=Q5JY94|association_with_transcript=-80bp_to_ENST00000435307_5end|coexpression_cluster_id=C1251|description=CAGE_peak_6_at_DARC_5end|id=chr1:159174623..159174628,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006965;1.80e-16;2!UBERON:0006603;1.38e-14;65!UBERON:0010227;1.60e-09;1!UBERON:0010115;2.13e-09;1!UBERON:0009143;6.46e-09;1!UBERON:0010226;6.46e-09;1!UBERON:0004874;6.46e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.26e-73!115;UBERON:0002298!3.49e-17!8;UBERON:0001049!1.60e-12!57;UBERON:0005068!1.60e-12!57;UBERON:0006241!1.60e-12!57;UBERON:0007135!1.60e-12!57;UBERON:0003075!1.41e-11!86;UBERON:0007284!1.41e-11!86;UBERON:0002346!8.96e-11!90;UBERON:0003076!1.34e-10!15;UBERON:0003057!1.34e-10!15;UBERON:0005743!4.27e-10!86;UBERON:0003103!5.79e-10!69;UBERON:0001017!8.04e-10!82;UBERON:0004151!4.76e-09!3;UBERON:0000073!1.38e-08!94;UBERON:0001016!1.38e-08!94;UBERON:0002616!2.55e-08!59;UBERON:0002308!4.67e-08!9;UBERON:0000125!4.67e-08!9;UBERON:0002240!1.32e-07!3;UBERON:0000477!1.53e-07!286;UBERON:0001896!1.73e-07!3;UBERON:0005290!1.73e-07!3;UBERON:0010096!1.73e-07!3;UBERON:0006331!2.86e-07!3;UBERON:0000062!3.01e-07!511;UBERON:0004111!3.19e-07!241;UBERON:0000955!3.39e-07!69;UBERON:0006238!3.39e-07!69;UBERON:0000988!4.19e-07!3|ontology_enrichment_uberon_v019=UBERON:0004151;2.00e-24;3!UBERON:0002081;2.80e-17;2!UBERON:0001723;4.65e-11;3!UBERON:0001033;4.65e-11;3!UBERON:0002079;1.60e-09;1!UBERON:0002134;1.74e-09;1!UBERON:0005208;1.74e-09;1!UBERON:0004145;1.74e-09;1!UBERON:0005946;1.74e-09;1!UBERON:0005965;1.74e-09;1!UBERON:0002078;1.74e-09;1!UBERON:0002363;2.13e-09;1!UBERON:0000996;2.13e-09;1!UBERON:0002372;6.46e-09;1!UBERON:0000029;6.46e-09;1!UBERON:0002084;6.46e-09;1!UBERON:0000989;6.46e-09;1!UBERON:0008811;6.46e-09;1!UBERON:0001961;6.46e-09;1!UBERON:0001744;6.46e-09;1!UBERON:0002082;6.46e-09;1!UBERON:0001042;6.46e-09;1!UBERON:0001735;6.46e-09;1!UBERON:0007023;2.11e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.36e-35,114;UBERON:0004151,1.11e-24,3;UBERON:0002081,2.81e-17,2;UBERON:0010227,2.81e-17,2;UBERON:0001723,9.47e-11,3;UBERON:0001033,9.47e-11,3;UBERON:0010056,9.47e-11,3;UBERON:0002079,1.60e-09,1;UBERON:0002134,1.74e-09,1;UBERON:0005208,1.74e-09,1;UBERON:0005946,1.74e-09,1;UBERON:0005965,1.74e-09,1;UBERON:0002078,1.74e-09,1;UBERON:0000996,2.04e-09,1;UBERON:0002363,2.22e-09,1;UBERON:0007645,2.22e-09,1;UBERON:0007647,2.22e-09,1;UBERON:0010115,2.22e-09,1;UBERON:0002084,3.58e-09,1;UBERON:0002082,3.58e-09,1;UBERON:0010226,3.58e-09,1;UBERON:0000989,3.88e-09,1;UBERON:0008811,3.88e-09,1;UBERON:0006258,3.88e-09,1;UBERON:0005876,3.88e-09,1;UBERON:0004874,3.88e-09,1;UBERON:0000029,4.19e-09,1;UBERON:0002372,7.27e-09,1;UBERON:0001961,7.27e-09,1;UBERON:0001744,7.27e-09,1;UBERON:0001735,7.27e-09,1;UBERON:0001042,3.26e-07,10;UBERON:0009145,3.26e-07,10;UBERON:0000161,4.37e-07,36|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,4.54175355742871,0,0,0,0,0,0,0,0,0,0,0,1.59398390600856,0.828851746593443,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0.0927680981618513,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0.438770794307945,0,0,2.46240827212151,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.707660516026713,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,3.09614240179591,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.93978032976839,0,0.225980740780532,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.837847203816763,0,5.0251111720377,0.998395002494955,0.858452096273142,0.669514372325618,0.134366944973453,0,0,0,0,0,0,0.0846733320657845,0,0.408610218334727,0,0,0,0,0,0.0607495566580247,0,0.551639951094387,0.15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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2532 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4035 | |||
|TSSclassifier=S | |||
|UniProt=Q5JY94 | |||
|association_with_transcript=-80bp_to_ENST00000435307_5end | |||
|coexpression_cluster_id=C1251 | |||
|description=CAGE_peak_6_at_DARC_5end | |||
|id=chr1:159174623..159174628,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;1.80e-16;2!UBERON:0006603;1.38e-14;65!UBERON:0010227;1.60e-09;1!UBERON:0010115;2.13e-09;1!UBERON:0009143;6.46e-09;1!UBERON:0010226;6.46e-09;1!UBERON:0004874;6.46e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-73!115;UBERON:0002298!3.49e-17!8;UBERON:0001049!1.60e-12!57;UBERON:0005068!1.60e-12!57;UBERON:0006241!1.60e-12!57;UBERON:0007135!1.60e-12!57;UBERON:0003075!1.41e-11!86;UBERON:0007284!1.41e-11!86;UBERON:0002346!8.96e-11!90;UBERON:0003076!1.34e-10!15;UBERON:0003057!1.34e-10!15;UBERON:0005743!4.27e-10!86;UBERON:0003103!5.79e-10!69;UBERON:0001017!8.04e-10!82;UBERON:0004151!4.76e-09!3;UBERON:0000073!1.38e-08!94;UBERON:0001016!1.38e-08!94;UBERON:0002616!2.55e-08!59;UBERON:0002308!4.67e-08!9;UBERON:0000125!4.67e-08!9;UBERON:0002240!1.32e-07!3;UBERON:0000477!1.53e-07!286;UBERON:0001896!1.73e-07!3;UBERON:0005290!1.73e-07!3;UBERON:0010096!1.73e-07!3;UBERON:0006331!2.86e-07!3;UBERON:0000062!3.01e-07!511;UBERON:0004111!3.19e-07!241;UBERON:0000955!3.39e-07!69;UBERON:0006238!3.39e-07!69;UBERON:0000988!4.19e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.00e-24;3!UBERON:0002081;2.80e-17;2!UBERON:0001723;4.65e-11;3!UBERON:0001033;4.65e-11;3!UBERON:0002079;1.60e-09;1!UBERON:0002134;1.74e-09;1!UBERON:0005208;1.74e-09;1!UBERON:0004145;1.74e-09;1!UBERON:0005946;1.74e-09;1!UBERON:0005965;1.74e-09;1!UBERON:0002078;1.74e-09;1!UBERON:0002363;2.13e-09;1!UBERON:0000996;2.13e-09;1!UBERON:0002372;6.46e-09;1!UBERON:0000029;6.46e-09;1!UBERON:0002084;6.46e-09;1!UBERON:0000989;6.46e-09;1!UBERON:0008811;6.46e-09;1!UBERON:0001961;6.46e-09;1!UBERON:0001744;6.46e-09;1!UBERON:0002082;6.46e-09;1!UBERON:0001042;6.46e-09;1!UBERON:0001735;6.46e-09;1!UBERON:0007023;2.11e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.36e-35,114;UBERON:0004151,1.11e-24,3;UBERON:0002081,2.81e-17,2;UBERON:0010227,2.81e-17,2;UBERON:0001723,9.47e-11,3;UBERON:0001033,9.47e-11,3;UBERON:0010056,9.47e-11,3;UBERON:0002079,1.60e-09,1;UBERON:0002134,1.74e-09,1;UBERON:0005208,1.74e-09,1;UBERON:0005946,1.74e-09,1;UBERON:0005965,1.74e-09,1;UBERON:0002078,1.74e-09,1;UBERON:0000996,2.04e-09,1;UBERON:0002363,2.22e-09,1;UBERON:0007645,2.22e-09,1;UBERON:0007647,2.22e-09,1;UBERON:0010115,2.22e-09,1;UBERON:0002084,3.58e-09,1;UBERON:0002082,3.58e-09,1;UBERON:0010226,3.58e-09,1;UBERON:0000989,3.88e-09,1;UBERON:0008811,3.88e-09,1;UBERON:0006258,3.88e-09,1;UBERON:0005876,3.88e-09,1;UBERON:0004874,3.88e-09,1;UBERON:0000029,4.19e-09,1;UBERON:0002372,7.27e-09,1;UBERON:0001961,7.27e-09,1;UBERON:0001744,7.27e-09,1;UBERON:0001735,7.27e-09,1;UBERON:0001042,3.26e-07,10;UBERON:0009145,3.26e-07,10;UBERON:0000161,4.37e-07,36 | |||
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|short_description=p6@DARC | |||
}} |
Revision as of 01:07, 12 September 2013
Short description: | p6@DARC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_DARC_5end |
Coexpression cluster: | C1251_adipose_heart_left_trachea_dura_cervix_bladder |
Association with transcript: | -80bp_to_ENST00000435307_5end |
EntrezGene: | DARC |
HGNC: | 4035 |
UniProt: | Q5JY94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.36e-35 | 114 |
cardiac chamber | 1.11e-24 | 3 |
cardiac atrium | 2.81e-17 | 2 |
future cardiac atrium | 2.81e-17 | 2 |
tongue | 9.47e-11 | 3 |
gustatory system | 9.47e-11 | 3 |
future tongue | 9.47e-11 | 3 |
left cardiac atrium | 1.60e-09 | 1 |
tricuspid valve | 1.74e-09 | 1 |
right atrium valve | 1.74e-09 | 1 |
outflow tract of atrium | 1.74e-09 | 1 |
outflow part of right atrium | 1.74e-09 | 1 |
right cardiac atrium | 1.74e-09 | 1 |
vagina | 2.04e-09 | 1 |
dura mater | 2.22e-09 | 1 |
future meninx | 2.22e-09 | 1 |
ectomeninx | 2.22e-09 | 1 |
future dura mater | 2.22e-09 | 1 |
heart left ventricle | 3.58e-09 | 1 |
cardiac ventricle | 3.58e-09 | 1 |
future cardiac ventricle | 3.58e-09 | 1 |
penis | 3.88e-09 | 1 |
intromittent organ | 3.88e-09 | 1 |
lateral plate mesenchyme | 3.88e-09 | 1 |
undifferentiated genital tubercle | 3.88e-09 | 1 |
somatopleure | 3.88e-09 | 1 |
lymph node | 4.19e-09 | 1 |
tonsil | 7.27e-09 | 1 |
mucosa-associated lymphoid tissue | 7.27e-09 | 1 |
lymphoid tissue | 7.27e-09 | 1 |
tonsillar ring | 7.27e-09 | 1 |
chordate pharynx | 3.26e-07 | 10 |
pharyngeal region of foregut | 3.26e-07 | 10 |
orifice | 4.37e-07 | 36 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.