FFCP PHASE1:Hg19::chr1:165414259..165414273,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6258|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=10479|TSSclassifier=W|UniProt=|association_with_transcript=135bp_to_ENST00000465764_5end|coexpression_cluster_id=C2539|description=CAGE_peak_6_at_RXRG_5end|id=chr1:165414259..165414273,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0003056;1.64e-17;3|ontology_enrichment_disease=DOID:1909!1.99e-07!2|ontology_enrichment_disease_v019=DOID:1909;8.16e-26;2|ontology_enrichment_disease_v019_2=DOID:1909,5.25e-26,2|ontology_enrichment_uberon=UBERON:0007023!1.07e-28!115;UBERON:0003075!1.90e-16!86;UBERON:0007284!1.90e-16!86;UBERON:0001049!8.09e-16!57;UBERON:0005068!8.09e-16!57;UBERON:0006241!8.09e-16!57;UBERON:0007135!8.09e-16!57;UBERON:0002346!2.05e-15!90;UBERON:0000955!8.09e-15!69;UBERON:0006238!8.09e-15!69;UBERON:0005743!1.06e-14!86;UBERON:0001017!3.20e-14!82;UBERON:0000073!5.19e-14!94;UBERON:0001016!5.19e-14!94;UBERON:0002616!1.80e-13!59;UBERON:0003296!4.31e-13!4;UBERON:0010133!4.31e-13!4;UBERON:0002780!4.76e-13!41;UBERON:0001890!4.76e-13!41;UBERON:0006240!4.76e-13!41;UBERON:0003080!1.18e-12!42;UBERON:0004121!6.42e-12!169;UBERON:0003056!1.35e-11!61;UBERON:0000924!1.91e-11!173;UBERON:0006601!1.91e-11!173;UBERON:0000153!1.92e-11!129;UBERON:0007811!1.92e-11!129;UBERON:0001894!9.79e-11!7;UBERON:0006222!9.79e-11!7;UBERON:0000033!2.88e-10!123;UBERON:0001896!3.99e-09!3;UBERON:0005290!3.99e-09!3;UBERON:0010096!3.99e-09!3;UBERON:0001905!1.51e-07!2;UBERON:0002757!1.51e-07!2;UBERON:0010134!1.51e-07!2;UBERON:0002784!1.51e-07!2;UBERON:0005408!1.51e-07!2;UBERON:0001899!1.51e-07!2;UBERON:0001630!2.12e-07!2;UBERON:0005090!2.12e-07!2;UBERON:0000007!3.23e-07!2;UBERON:0001893!4.96e-07!34;UBERON:0000341!6.95e-07!2|ontology_enrichment_uberon_v019=UBERON:0003296;4.30e-50;4!UBERON:0010133;4.30e-50;4!UBERON:0001894;7.86e-29;7!UBERON:0001905;1.67e-26;2!UBERON:0002757;1.67e-26;2!UBERON:0010134;1.67e-26;2!UBERON:0005408;1.67e-26;2!UBERON:0001899;1.67e-26;2!UBERON:0005090;8.16e-26;2!UBERON:0001630;8.16e-26;2!UBERON:0000007;1.85e-25;2!UBERON:0001389;5.49e-14;1!UBERON:0000026;5.49e-14;1!UBERON:0008784;5.49e-14;1!UBERON:0006058;5.49e-14;1!UBERON:0003663;5.49e-14;1!UBERON:0004256;5.49e-14;1!UBERON:0004708;5.49e-14;1!UBERON:0002101;5.49e-14;1!UBERON:0004709;5.49e-14;1!UBERON:0002529;5.49e-14;1!UBERON:0010538;5.49e-14;1!UBERON:0003661;5.49e-14;1!UBERON:0010890;5.49e-14;1!UBERON:0002471;5.49e-14;1!UBERON:0001383;5.49e-14;1!UBERON:0010758;5.49e-14;1!UBERON:0010707;5.49e-14;1!UBERON:0000978;5.49e-14;1!UBERON:0002103;5.49e-14;1!UBERON:0001665;5.49e-14;1!UBERON:0003823;5.49e-14;1!UBERON:0000154;5.49e-14;1!UBERON:0010709;5.49e-14;1!UBERON:0002784;9.15e-14;4!UBERON:0002426;1.25e-13;1!UBERON:0003831;1.25e-13;1!UBERON:0003898;1.25e-13;1!UBERON:0004830;1.25e-13;1!UBERON:0003830;1.25e-13;1!UBERON:0005175;1.25e-13;1!UBERON:0001774;1.25e-13;1!UBERON:0001103;1.25e-13;1!UBERON:0001134;9.33e-13;16!UBERON:0002036;9.33e-13;16!UBERON:0000966;6.79e-11;5!UBERON:0005388;6.79e-11;5!UBERON:0001802;6.79e-11;5!UBERON:0000341;1.87e-07;2!UBERON:0002385;6.68e-07;31!UBERON:0001015;6.68e-07;31!UBERON:0000383;6.68e-07;31|ontology_enrichment_uberon_v019_2=UBERON:0003296,9.18e-50,4;UBERON:0010133,9.18e-50,4;UBERON:0001894,1.21e-28,7;UBERON:0006222,1.21e-28,7;UBERON:0001905,1.67e-26,2;UBERON:0002757,1.67e-26,2;UBERON:0010134,1.67e-26,2;UBERON:0005408,1.67e-26,2;UBERON:0001899,1.67e-26,2;UBERON:0005090,6.76e-26,2;UBERON:0001630,6.76e-26,2;UBERON:0000007,3.91e-25,2;UBERON:0005418,5.85e-14,1;UBERON:0001389,5.85e-14,1;UBERON:0000026,5.85e-14,1;UBERON:0008784,5.85e-14,1;UBERON:0006058,5.85e-14,1;UBERON:0003663,5.85e-14,1;UBERON:0004256,5.85e-14,1;UBERON:0004708,5.85e-14,1;UBERON:0002101,5.85e-14,1;UBERON:0004709,5.85e-14,1;UBERON:0002529,5.85e-14,1;UBERON:0010538,5.85e-14,1;UBERON:0003661,5.85e-14,1;UBERON:0010890,5.85e-14,1;UBERON:0002471,5.85e-14,1;UBERON:0001383,5.85e-14,1;UBERON:0004357,5.85e-14,1;UBERON:0004347,5.85e-14,1;UBERON:0005420,5.85e-14,1;UBERON:0005732,5.85e-14,1;UBERON:0010758,5.85e-14,1;UBERON:0010707,5.85e-14,1;UBERON:0000978,5.85e-14,1;UBERON:0002103,5.85e-14,1;UBERON:0001665,5.85e-14,1;UBERON:0003823,5.85e-14,1;UBERON:0000154,5.85e-14,1;UBERON:0010709,5.85e-14,1;UBERON:0005733,5.85e-14,1;UBERON:0005730,5.85e-14,1;UBERON:0002784,9.15e-14,4;UBERON:0002426,9.73e-14,1;UBERON:0003831,9.73e-14,1;UBERON:0003898,9.73e-14,1;UBERON:0004830,9.73e-14,1;UBERON:0003830,9.73e-14,1;UBERON:0005175,9.73e-14,1;UBERON:0001774,9.73e-14,1;UBERON:0001103,9.73e-14,1;UBERON:0010084,9.73e-14,1;UBERON:0000966,3.02e-09,6;UBERON:0005388,3.02e-09,6;UBERON:0001802,3.02e-09,6;UBERON:0000341,1.87e-07,2;UBERON:0003056,6.86e-07,61;UBERON:0010371,9.02e-07,104|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6258 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10479 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=135bp_to_ENST00000465764_5end | |||
|coexpression_cluster_id=C2539 | |||
|description=CAGE_peak_6_at_RXRG_5end | |||
|id=chr1:165414259..165414273,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.64e-17;3 | |||
|ontology_enrichment_disease=DOID:1909!1.99e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;8.16e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,5.25e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.07e-28!115;UBERON:0003075!1.90e-16!86;UBERON:0007284!1.90e-16!86;UBERON:0001049!8.09e-16!57;UBERON:0005068!8.09e-16!57;UBERON:0006241!8.09e-16!57;UBERON:0007135!8.09e-16!57;UBERON:0002346!2.05e-15!90;UBERON:0000955!8.09e-15!69;UBERON:0006238!8.09e-15!69;UBERON:0005743!1.06e-14!86;UBERON:0001017!3.20e-14!82;UBERON:0000073!5.19e-14!94;UBERON:0001016!5.19e-14!94;UBERON:0002616!1.80e-13!59;UBERON:0003296!4.31e-13!4;UBERON:0010133!4.31e-13!4;UBERON:0002780!4.76e-13!41;UBERON:0001890!4.76e-13!41;UBERON:0006240!4.76e-13!41;UBERON:0003080!1.18e-12!42;UBERON:0004121!6.42e-12!169;UBERON:0003056!1.35e-11!61;UBERON:0000924!1.91e-11!173;UBERON:0006601!1.91e-11!173;UBERON:0000153!1.92e-11!129;UBERON:0007811!1.92e-11!129;UBERON:0001894!9.79e-11!7;UBERON:0006222!9.79e-11!7;UBERON:0000033!2.88e-10!123;UBERON:0001896!3.99e-09!3;UBERON:0005290!3.99e-09!3;UBERON:0010096!3.99e-09!3;UBERON:0001905!1.51e-07!2;UBERON:0002757!1.51e-07!2;UBERON:0010134!1.51e-07!2;UBERON:0002784!1.51e-07!2;UBERON:0005408!1.51e-07!2;UBERON:0001899!1.51e-07!2;UBERON:0001630!2.12e-07!2;UBERON:0005090!2.12e-07!2;UBERON:0000007!3.23e-07!2;UBERON:0001893!4.96e-07!34;UBERON:0000341!6.95e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;4.30e-50;4!UBERON:0010133;4.30e-50;4!UBERON:0001894;7.86e-29;7!UBERON:0001905;1.67e-26;2!UBERON:0002757;1.67e-26;2!UBERON:0010134;1.67e-26;2!UBERON:0005408;1.67e-26;2!UBERON:0001899;1.67e-26;2!UBERON:0005090;8.16e-26;2!UBERON:0001630;8.16e-26;2!UBERON:0000007;1.85e-25;2!UBERON:0001389;5.49e-14;1!UBERON:0000026;5.49e-14;1!UBERON:0008784;5.49e-14;1!UBERON:0006058;5.49e-14;1!UBERON:0003663;5.49e-14;1!UBERON:0004256;5.49e-14;1!UBERON:0004708;5.49e-14;1!UBERON:0002101;5.49e-14;1!UBERON:0004709;5.49e-14;1!UBERON:0002529;5.49e-14;1!UBERON:0010538;5.49e-14;1!UBERON:0003661;5.49e-14;1!UBERON:0010890;5.49e-14;1!UBERON:0002471;5.49e-14;1!UBERON:0001383;5.49e-14;1!UBERON:0010758;5.49e-14;1!UBERON:0010707;5.49e-14;1!UBERON:0000978;5.49e-14;1!UBERON:0002103;5.49e-14;1!UBERON:0001665;5.49e-14;1!UBERON:0003823;5.49e-14;1!UBERON:0000154;5.49e-14;1!UBERON:0010709;5.49e-14;1!UBERON:0002784;9.15e-14;4!UBERON:0002426;1.25e-13;1!UBERON:0003831;1.25e-13;1!UBERON:0003898;1.25e-13;1!UBERON:0004830;1.25e-13;1!UBERON:0003830;1.25e-13;1!UBERON:0005175;1.25e-13;1!UBERON:0001774;1.25e-13;1!UBERON:0001103;1.25e-13;1!UBERON:0001134;9.33e-13;16!UBERON:0002036;9.33e-13;16!UBERON:0000966;6.79e-11;5!UBERON:0005388;6.79e-11;5!UBERON:0001802;6.79e-11;5!UBERON:0000341;1.87e-07;2!UBERON:0002385;6.68e-07;31!UBERON:0001015;6.68e-07;31!UBERON:0000383;6.68e-07;31 | |||
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|short_description=p6@RXRG | |||
}} |
Revision as of 01:32, 12 September 2013
Short description: | p6@RXRG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RXRG_5end |
Coexpression cluster: | C2539_pineal_small_pituitary_parietal_melanoma_eye_diencephalon |
Association with transcript: | 135bp_to_ENST00000465764_5end |
EntrezGene: | RXRG |
HGNC: | 10479 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanoma | 5.25e-26 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.