FFCP PHASE1:Hg19::chr10:72576547..72576568,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8879|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=10817|TSSclassifier=S|UniProt=O95470|association_with_transcript=-41bp_to_AB384155,AF144638_5end|coexpression_cluster_id=C127|description=CAGE_peak_10_at_SGPL1_5end|id=chr10:72576547..72576568,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000235;1.93e-17;6!CL:1000415;1.29e-13;2!CL:0000322;1.10e-09;3!CL:0002541;1.60e-09;3|ontology_enrichment_celltype_v019_2=CL:0000235,2.01e-17,6;CL:1000415,1.07e-13,2;CL:0000322,1.10e-09,3;CL:0002541,1.81e-09,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;2.16e-26;1!DOID:1357;2.16e-26;1!DOID:3910;7.30e-14;2!DOID:0050615;3.04e-07;16|ontology_enrichment_disease_v019_2=DOID:0050619,2.16e-26,1;DOID:1357,2.16e-26,1;DOID:3910,7.30e-14,2;DOID:0050615,3.04e-07,16|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001764;2.16e-26;1!UBERON:0001825;2.16e-26;1!UBERON:0004903;7.30e-14;2!UBERON:0002173;7.30e-14;2!UBERON:0002186;7.30e-14;2!UBERON:0004821;1.10e-09;3!UBERON:0007499;1.10e-09;3!UBERON:0003215;1.10e-09;3!UBERON:0010368;1.10e-09;3!UBERON:0009911;1.10e-09;3!UBERON:0002299;1.10e-09;3!UBERON:0006524;1.10e-09;3!UBERON:0008874;1.10e-09;3!UBERON:0002169;1.10e-09;3!UBERON:0004894;1.10e-09;3!UBERON:0002110;1.60e-09;3!UBERON:0003124;1.60e-09;3!UBERON:0000920;1.60e-09;3!UBERON:0009856;1.40e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.16e-26,1;UBERON:0001825,2.16e-26,1;UBERON:0004903,7.30e-14,2;UBERON:0002173,7.30e-14,2;UBERON:0002186,7.30e-14,2;UBERON:0004821,1.10e-09,3;UBERON:0003215,1.10e-09,3;UBERON:0010368,1.10e-09,3;UBERON:0009911,1.10e-09,3;UBERON:0002299,1.10e-09,3;UBERON:0006524,1.10e-09,3;UBERON:0008874,1.10e-09,3;UBERON:0002169,1.10e-09,3;UBERON:0004894,1.10e-09,3;UBERON:0002110,1.41e-09,3;UBERON:0006242,1.41e-09,3;UBERON:0000920,1.81e-09,3|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0.099972991182057,1.2162378064119,0,2.10833939483032,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8563893593836,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0.724999575434793,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,37.535929003806,0,0,0,0.573409195690071,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0.857766365499703,0,0,0.231522474323834,0,0.358177682162975,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0.756215088665154,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,3.12605604493237,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0.39246546425257,0,0.560544326627578,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0.5647304101948,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.109265571963696,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0.387533459016037,0.869046000142011,0,0,0.202117188958219,0,0,0.336760265072938,0,0.332660356546013,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0.244482888365733,0.406896178315738,0,0.402547587182052,0|short_description=p10@SGPL1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=8879 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10817 | |||
|TSSclassifier=S | |||
|UniProt=O95470 | |||
|association_with_transcript=-41bp_to_AB384155,AF144638_5end | |||
|coexpression_cluster_id=C127 | |||
|description=CAGE_peak_10_at_SGPL1_5end | |||
|id=chr10:72576547..72576568,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.93e-17;6!CL:1000415;1.29e-13;2!CL:0000322;1.10e-09;3!CL:0002541;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.01e-17,6;CL:1000415,1.07e-13,2;CL:0000322,1.10e-09,3;CL:0002541,1.81e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.16e-26;1!DOID:1357;2.16e-26;1!DOID:3910;7.30e-14;2!DOID:0050615;3.04e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.16e-26,1;DOID:1357,2.16e-26,1;DOID:3910,7.30e-14,2;DOID:0050615,3.04e-07,16 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.16e-26;1!UBERON:0001825;2.16e-26;1!UBERON:0004903;7.30e-14;2!UBERON:0002173;7.30e-14;2!UBERON:0002186;7.30e-14;2!UBERON:0004821;1.10e-09;3!UBERON:0007499;1.10e-09;3!UBERON:0003215;1.10e-09;3!UBERON:0010368;1.10e-09;3!UBERON:0009911;1.10e-09;3!UBERON:0002299;1.10e-09;3!UBERON:0006524;1.10e-09;3!UBERON:0008874;1.10e-09;3!UBERON:0002169;1.10e-09;3!UBERON:0004894;1.10e-09;3!UBERON:0002110;1.60e-09;3!UBERON:0003124;1.60e-09;3!UBERON:0000920;1.60e-09;3!UBERON:0009856;1.40e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.16e-26,1;UBERON:0001825,2.16e-26,1;UBERON:0004903,7.30e-14,2;UBERON:0002173,7.30e-14,2;UBERON:0002186,7.30e-14,2;UBERON:0004821,1.10e-09,3;UBERON:0003215,1.10e-09,3;UBERON:0010368,1.10e-09,3;UBERON:0009911,1.10e-09,3;UBERON:0002299,1.10e-09,3;UBERON:0006524,1.10e-09,3;UBERON:0008874,1.10e-09,3;UBERON:0002169,1.10e-09,3;UBERON:0004894,1.10e-09,3;UBERON:0002110,1.41e-09,3;UBERON:0006242,1.41e-09,3;UBERON:0000920,1.81e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0,0.204000691244253,0.313454721478088,0,0,0.125542639594803,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0,0,0.0654895377488563,0,0,0.324547393654683,0.348259474598534,1.46253756570752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0,0.821860859650752,0,0,0,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0.871533458600294,0.099972991182057,1.2162378064119,0,2.10833939483032,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.623912584592421,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8563893593836,0,0,0,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0.724999575434793,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,1.00757352742049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0.296521128680622,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0.137041924646751,0,0,1.75996244461323,0,0,0,0,0,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0.146552233678082,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,37.535929003806,0,0,0,0.573409195690071,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0.192619830407303,0.857766365499703,0,0,0.231522474323834,0,0.358177682162975,0,0,0,0,0.168942440653073,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0.3062454773532,0,0,0,0,0.756215088665154,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,3.12605604493237,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0.606965604236632,0,0.0887023701626388,0,0,0,0,0.118193840883968,0.111231401892069,0.39246546425257,0,0.560544326627578,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0.5647304101948,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.109265571963696,0.253397002022874,0,0,0,0,0,0,0,0,0,0,0.387533459016037,0.869046000142011,0,0,0.202117188958219,0,0,0.336760265072938,0,0.332660356546013,0.0814032686109745,0.213454691755431,0,0.0898252021065869,0,0.244482888365733,0.406896178315738,0,0.402547587182052,0 | |||
|short_description=p10@SGPL1 | |||
}} |
Revision as of 14:12, 10 September 2013
Short description: | p10@SGPL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_SGPL1_5end |
Coexpression cluster: | C127_maxillary_small_hepatoblastoma_hepatocellular_alveolar_colon_argyrophil |
Association with transcript: | -41bp_to_AB384155, AF144638_5end |
EntrezGene: | SGPL1 |
HGNC: | 10817 |
UniProt: | O95470 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.01e-17 | 6 |
epithelial cell of gall bladder | 1.07e-13 | 2 |
pneumocyte | 1.10e-09 | 3 |
chorionic membrane mesenchymal stem cell | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.16e-26 | 1 |
paranasal sinus | 2.16e-26 | 1 |
bronchoalveolar duct junction | 7.30e-14 | 2 |
alveolar duct | 7.30e-14 | 2 |
bronchiole | 7.30e-14 | 2 |
pulmonary alveolus epithelium | 1.10e-09 | 3 |
alveolus | 1.10e-09 | 3 |
pulmonary lobule | 1.10e-09 | 3 |
lobule | 1.10e-09 | 3 |
alveolus of lung | 1.10e-09 | 3 |
alveolar system | 1.10e-09 | 3 |
pulmonary acinus | 1.10e-09 | 3 |
alveolar sac | 1.10e-09 | 3 |
alveolar wall | 1.10e-09 | 3 |
gallbladder | 1.41e-09 | 3 |
gall bladder primordium | 1.41e-09 | 3 |
egg chorion | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.16e-26 | 1 |
maxillary sinus cancer | 2.16e-26 | 1 |
lung adenocarcinoma | 7.30e-14 | 2 |
respiratory system cancer | 3.04e-07 | 16 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.