FFCP PHASE1:Hg19::chr10:102133422..102133433,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=28060|TSSclassifier=S|UniProt=|association_with_transcript=50bp_to_ENST00000454935_5end|description=CAGE_peak_6_at_LINC00263_5end|id=chr10:102133422..102133433,+|ontology_enrichment_celltype=CL:0000066!1.70e-09!254|ontology_enrichment_celltype_v019=CL:0000047;1.75e-07;2!CL:0002262;1.75e-07;2!CL:1000398;1.75e-07;2!CL:0002367;1.75e-07;2|ontology_enrichment_celltype_v019_2=CL:0002262,1.54e-07,2;CL:1000398,1.54e-07,2;CL:0002367,2.12e-07,2|ontology_enrichment_development_v019=UBERON:0008425;3.28e-14;1|ontology_enrichment_disease=DOID:305!3.54e-12!106;DOID:0050687!1.40e-09!143|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000033!1.07e-16!123;UBERON:0000153!7.13e-15!129;UBERON:0007811!7.13e-15!129;UBERON:0003075!4.15e-14!86;UBERON:0007284!4.15e-14!86;UBERON:0003056!8.22e-14!61;UBERON:0000064!1.67e-13!219;UBERON:0001049!8.48e-13!57;UBERON:0005068!8.48e-13!57;UBERON:0006241!8.48e-13!57;UBERON:0007135!8.48e-13!57;UBERON:0004121!8.91e-13!169;UBERON:0002346!9.88e-13!90;UBERON:0000955!3.27e-12!69;UBERON:0006238!3.27e-12!69;UBERON:0000924!6.21e-12!173;UBERON:0006601!6.21e-12!173;UBERON:0002616!6.86e-12!59;UBERON:0005743!2.85e-11!86;UBERON:0002780!3.78e-11!41;UBERON:0001890!3.78e-11!41;UBERON:0006240!3.78e-11!41;UBERON:0003080!1.17e-10!42;UBERON:0001893!1.73e-10!34;UBERON:0002020!1.87e-10!34;UBERON:0003528!1.87e-10!34;UBERON:0000073!2.04e-10!94;UBERON:0001016!2.04e-10!94;UBERON:0001017!2.73e-10!82;UBERON:0002791!6.10e-10!33;UBERON:0000481!3.38e-09!347;UBERON:0001869!4.73e-09!32;UBERON:0000063!4.07e-08!97;UBERON:0000062!7.38e-08!511;UBERON:0002420!2.13e-07!9;UBERON:0007245!2.13e-07!9;UBERON:0010009!2.13e-07!9;UBERON:0010011!2.13e-07!9;UBERON:0000454!2.13e-07!9;UBERON:0000475!2.20e-07!365;UBERON:0002308!2.87e-07!9;UBERON:0000125!2.87e-07!9;UBERON:0004119!3.87e-07!169;UBERON:0000925!3.87e-07!169;UBERON:0006595!3.87e-07!169;UBERON:0001007!5.58e-07!155;UBERON:0001555!5.58e-07!155;UBERON:0007026!5.58e-07!155;UBERON:0001737!7.88e-07!9;UBERON:0001004!9.62e-07!72|ontology_enrichment_uberon_v019=UBERON:0002336;1.10e-13;1!UBERON:0011215;1.10e-13;1!UBERON:0001018;1.10e-13;1!UBERON:0002473;1.10e-13;1!UBERON:0005340;1.10e-13;1!UBERON:0003544;1.10e-13;1!UBERON:0005970;1.10e-13;1!UBERON:0002316;1.10e-13;1!UBERON:0001020;1.10e-13;1!UBERON:0002437;1.10e-13;1!UBERON:0001897;1.12e-07;2!UBERON:0001954;1.12e-07;2!UBERON:0003022;1.12e-07;2!UBERON:0002421;1.12e-07;2!UBERON:0010225;1.12e-07;2!UBERON:0002600;1.12e-07;2!UBERON:0001281;1.75e-07;2!UBERON:0005162;1.75e-07;2!UBERON:0000122;1.75e-07;2!UBERON:0003497;1.75e-07;2!UBERON:0003909;1.75e-07;2!UBERON:0003835;1.75e-07;2!UBERON:0005969;1.75e-07;2!UBERON:0003956;1.75e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.07e-13,1;UBERON:0011215,2.07e-13,1;UBERON:0001018,2.07e-13,1;UBERON:0002473,2.07e-13,1;UBERON:0005340,2.07e-13,1;UBERON:0003544,2.07e-13,1;UBERON:0005970,2.07e-13,1;UBERON:0002316,2.07e-13,1;UBERON:0001020,2.07e-13,1;UBERON:0002437,2.07e-13,1;UBERON:0001897,1.12e-07,2;UBERON:0010225,1.12e-07,2;UBERON:0001954,1.20e-07,2;UBERON:0003022,1.20e-07,2;UBERON:0002421,1.20e-07,2;UBERON:0002600,1.20e-07,2;UBERON:0001281,1.54e-07,2;UBERON:0003497,1.54e-07,2;UBERON:0003909,1.54e-07,2;UBERON:0003835,1.54e-07,2;UBERON:0005969,2.12e-07,2;UBERON:0003956,2.12e-07,2;UBERON:0005162,2.40e-07,2;UBERON:0000122,2.40e-07,2|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0,0,0,0.492484232307152,0,0.313454721478088,0,0.410623275218653,0.502170558379211,0,0.0821005894499457,0,0,0,0,0,0.30120591877825,0.369754010166788,0.0774672005803016,0.142169232487422,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0.756278537312543,0.443458794925128,0.43917392846563,0.0654895377488563,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0.949265659568129,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0.117434498643765,0.161872944368132,0.140450806702248,0.204154171254893,0.245668634623536,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0.0920498986422993,0.323292113637624,0,0,0,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0.473227200159376,1.01150814046861,0.482022059766964,0.220587945464788,0.653638332277218,0,1.21348177344148,0.588664395376038,0.769494313892781,0,1.40241773803446,0.4115740113314,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0.219500570817251,0,0.301586917234893,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=28060 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=50bp_to_ENST00000454935_5end | |||
|description=CAGE_peak_6_at_LINC00263_5end | |||
|id=chr10:102133422..102133433,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.70e-09!254 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.75e-07;2!CL:0002262;1.75e-07;2!CL:1000398;1.75e-07;2!CL:0002367;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.54e-07,2;CL:1000398,1.54e-07,2;CL:0002367,2.12e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;3.28e-14;1 | |||
|ontology_enrichment_disease=DOID:305!3.54e-12!106;DOID:0050687!1.40e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!1.07e-16!123;UBERON:0000153!7.13e-15!129;UBERON:0007811!7.13e-15!129;UBERON:0003075!4.15e-14!86;UBERON:0007284!4.15e-14!86;UBERON:0003056!8.22e-14!61;UBERON:0000064!1.67e-13!219;UBERON:0001049!8.48e-13!57;UBERON:0005068!8.48e-13!57;UBERON:0006241!8.48e-13!57;UBERON:0007135!8.48e-13!57;UBERON:0004121!8.91e-13!169;UBERON:0002346!9.88e-13!90;UBERON:0000955!3.27e-12!69;UBERON:0006238!3.27e-12!69;UBERON:0000924!6.21e-12!173;UBERON:0006601!6.21e-12!173;UBERON:0002616!6.86e-12!59;UBERON:0005743!2.85e-11!86;UBERON:0002780!3.78e-11!41;UBERON:0001890!3.78e-11!41;UBERON:0006240!3.78e-11!41;UBERON:0003080!1.17e-10!42;UBERON:0001893!1.73e-10!34;UBERON:0002020!1.87e-10!34;UBERON:0003528!1.87e-10!34;UBERON:0000073!2.04e-10!94;UBERON:0001016!2.04e-10!94;UBERON:0001017!2.73e-10!82;UBERON:0002791!6.10e-10!33;UBERON:0000481!3.38e-09!347;UBERON:0001869!4.73e-09!32;UBERON:0000063!4.07e-08!97;UBERON:0000062!7.38e-08!511;UBERON:0002420!2.13e-07!9;UBERON:0007245!2.13e-07!9;UBERON:0010009!2.13e-07!9;UBERON:0010011!2.13e-07!9;UBERON:0000454!2.13e-07!9;UBERON:0000475!2.20e-07!365;UBERON:0002308!2.87e-07!9;UBERON:0000125!2.87e-07!9;UBERON:0004119!3.87e-07!169;UBERON:0000925!3.87e-07!169;UBERON:0006595!3.87e-07!169;UBERON:0001007!5.58e-07!155;UBERON:0001555!5.58e-07!155;UBERON:0007026!5.58e-07!155;UBERON:0001737!7.88e-07!9;UBERON:0001004!9.62e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;1.10e-13;1!UBERON:0011215;1.10e-13;1!UBERON:0001018;1.10e-13;1!UBERON:0002473;1.10e-13;1!UBERON:0005340;1.10e-13;1!UBERON:0003544;1.10e-13;1!UBERON:0005970;1.10e-13;1!UBERON:0002316;1.10e-13;1!UBERON:0001020;1.10e-13;1!UBERON:0002437;1.10e-13;1!UBERON:0001897;1.12e-07;2!UBERON:0001954;1.12e-07;2!UBERON:0003022;1.12e-07;2!UBERON:0002421;1.12e-07;2!UBERON:0010225;1.12e-07;2!UBERON:0002600;1.12e-07;2!UBERON:0001281;1.75e-07;2!UBERON:0005162;1.75e-07;2!UBERON:0000122;1.75e-07;2!UBERON:0003497;1.75e-07;2!UBERON:0003909;1.75e-07;2!UBERON:0003835;1.75e-07;2!UBERON:0005969;1.75e-07;2!UBERON:0003956;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.07e-13,1;UBERON:0011215,2.07e-13,1;UBERON:0001018,2.07e-13,1;UBERON:0002473,2.07e-13,1;UBERON:0005340,2.07e-13,1;UBERON:0003544,2.07e-13,1;UBERON:0005970,2.07e-13,1;UBERON:0002316,2.07e-13,1;UBERON:0001020,2.07e-13,1;UBERON:0002437,2.07e-13,1;UBERON:0001897,1.12e-07,2;UBERON:0010225,1.12e-07,2;UBERON:0001954,1.20e-07,2;UBERON:0003022,1.20e-07,2;UBERON:0002421,1.20e-07,2;UBERON:0002600,1.20e-07,2;UBERON:0001281,1.54e-07,2;UBERON:0003497,1.54e-07,2;UBERON:0003909,1.54e-07,2;UBERON:0003835,1.54e-07,2;UBERON:0005969,2.12e-07,2;UBERON:0003956,2.12e-07,2;UBERON:0005162,2.40e-07,2;UBERON:0000122,2.40e-07,2 | |||
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| |||
|short_description=p6@LINC00263 | |||
}} |
Revision as of 11:18, 10 September 2013
Short description: | p6@LINC00263 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_LINC00263_5end |
Coexpression cluster: | NA |
Association with transcript: | 50bp_to_ENST00000454935_5end |
EntrezGene: | NA |
HGNC: | 28060 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.54e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.54e-07 | 2 |
trabecular meshwork cell | 2.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.07e-13 | 1 |
central nervous system cell part cluster | 2.07e-13 | 1 |
axon tract | 2.07e-13 | 1 |
intercerebral commissure | 2.07e-13 | 1 |
dorsal telencephalic commissure | 2.07e-13 | 1 |
brain white matter | 2.07e-13 | 1 |
brain commissure | 2.07e-13 | 1 |
white matter | 2.07e-13 | 1 |
nervous system commissure | 2.07e-13 | 1 |
cerebral hemisphere white matter | 2.07e-13 | 1 |
dorsal plus ventral thalamus | 1.12e-07 | 2 |
thalamic complex | 1.12e-07 | 2 |
Ammon's horn | 1.20e-07 | 2 |
lobe parts of cerebral cortex | 1.20e-07 | 2 |
hippocampal formation | 1.20e-07 | 2 |
limbic lobe | 1.20e-07 | 2 |
hepatic sinusoid | 1.54e-07 | 2 |
abdomen blood vessel | 1.54e-07 | 2 |
sinusoid | 1.54e-07 | 2 |
abdominal segment blood vessel | 1.54e-07 | 2 |
reticulum trabeculare | 2.12e-07 | 2 |
aqueous drainage system | 2.12e-07 | 2 |
multi cell component structure | 2.40e-07 | 2 |
neuron projection bundle | 2.40e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.