FFCP PHASE1:Hg19::chr11:1856292..1856320,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=90019|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19264|TSSclassifier=S|UniProt=Q8NBV8|association_with_transcript=-6bp_to_uc009ydb.1_5end|coexpression_cluster_id=C1138|description=CAGE_peak_4_at_SYT8_5end|id=chr11:1856292..1856320,+|ontology_enrichment_celltype=CL:0002076!6.29e-12!43;CL:0000223!5.31e-10!59;CL:0002327!1.69e-07!4;CL:0002251!5.69e-07!21|ontology_enrichment_celltype_v019=CL:0002327;4.46e-18;4!CL:0002541;5.98e-11;3|ontology_enrichment_celltype_v019_2=CL:0002327,4.47e-18,4;CL:0002541,6.29e-11,3|ontology_enrichment_development_v019=UBERON:0008814;1.93e-15;2!UBERON:0010056;1.93e-15;2!UBERON:0006242;3.58e-09;1!UBERON:0006298;7.74e-09;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000166!5.20e-14!21;UBERON:0000161!4.66e-12!35;UBERON:0001044!5.37e-12!6;UBERON:0003293!5.37e-12!6;UBERON:0003294!5.37e-12!6;UBERON:0010047!5.37e-12!6;UBERON:0000167!5.37e-12!6;UBERON:0000165!1.22e-11!28;UBERON:0000930!1.22e-11!28;UBERON:0000078!3.16e-11!18;UBERON:0004119!6.75e-11!169;UBERON:0000925!6.75e-11!169;UBERON:0006595!6.75e-11!169;UBERON:0001004!7.91e-10!72;UBERON:0001723!2.99e-09!3;UBERON:0001033!2.99e-09!3;UBERON:0010056!2.99e-09!3;UBERON:0006947!3.15e-09!3;UBERON:0004054!3.15e-09!3;UBERON:0001444!3.37e-09!48;UBERON:0003729!8.52e-09!5;UBERON:0000077!5.53e-08!130;UBERON:0001007!1.30e-07!155;UBERON:0001555!1.30e-07!155;UBERON:0007026!1.30e-07!155;UBERON:0001911!1.69e-07!4;UBERON:0005333!1.69e-07!4;UBERON:0008425!1.69e-07!4;UBERON:0005311!1.69e-07!4;UBERON:0000344!2.71e-07!12;UBERON:0003408!5.24e-07!10;UBERON:0005904!5.36e-07!4;UBERON:0002294!5.46e-07!7;UBERON:0001173!5.46e-07!7;UBERON:0004912!5.46e-07!7;UBERON:0003343!7.24e-07!4;UBERON:0004785!7.24e-07!4;UBERON:0004175!7.54e-07!25;UBERON:0000974!7.86e-07!10;UBERON:0001041!8.72e-07!98;UBERON:0000341!9.89e-07!2|ontology_enrichment_uberon_v019=UBERON:0001723;2.89e-22;3!UBERON:0001033;2.89e-22;3!UBERON:0001911;4.46e-18;4!UBERON:0002294;2.46e-17;7!UBERON:0001173;2.46e-17;7!UBERON:0000165;2.98e-12;28!UBERON:0001044;4.61e-12;6!UBERON:0003293;4.61e-12;6!UBERON:0003294;4.61e-12;6!UBERON:0010047;4.61e-12;6!UBERON:0003408;4.61e-12;6!UBERON:0000167;4.61e-12;6!UBERON:0000974;8.51e-12;6!UBERON:0000058;8.69e-12;10!UBERON:0002110;2.60e-11;3!UBERON:0003124;5.98e-11;3!UBERON:0000920;5.98e-11;3!UBERON:0006947;1.32e-10;3!UBERON:0004054;1.32e-10;3!UBERON:0000161;8.72e-10;19!UBERON:0000166;8.72e-10;19!UBERON:0001736;7.74e-09;1!UBERON:0001000;1.42e-08;1!UBERON:0001301;1.42e-08;1!UBERON:0004913;1.42e-08;1!UBERON:0003703;1.42e-08;1!UBERON:0005352;1.42e-08;1!UBERON:0001174;1.42e-08;1!UBERON:0004914;1.42e-08;1!UBERON:0003343;2.35e-08;4!UBERON:0004785;2.35e-08;4!UBERON:0002394;3.59e-08;4!UBERON:0005904;3.59e-08;4!UBERON:0003928;3.59e-08;4!UBERON:0002365;5.48e-08;31!UBERON:0002330;5.48e-08;31!UBERON:0000020;1.03e-07;23!UBERON:0001032;2.20e-07;24!UBERON:0004456;2.20e-07;24!UBERON:0005631;3.34e-07;10!UBERON:0000158;3.34e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.89e-22,3;UBERON:0001033,3.89e-22,3;UBERON:0010056,3.89e-22,3;UBERON:0001911,4.47e-18,4;UBERON:0005333,4.47e-18,4;UBERON:0008425,4.47e-18,4;UBERON:0005311,4.47e-18,4;UBERON:0000166,9.32e-16,22;UBERON:0002294,1.23e-13,9;UBERON:0001173,1.23e-13,9;UBERON:0004912,1.23e-13,9;UBERON:0001044,4.71e-12,6;UBERON:0003293,4.71e-12,6;UBERON:0003294,4.71e-12,6;UBERON:0010047,4.71e-12,6;UBERON:0000167,4.71e-12,6;UBERON:0000165,9.16e-12,29;UBERON:0000930,9.16e-12,29;UBERON:0002110,2.54e-11,3;UBERON:0006242,2.54e-11,3;UBERON:0000920,6.29e-11,3;UBERON:0006947,1.20e-10,3;UBERON:0004054,1.20e-10,3;UBERON:0000161,2.54e-09,36;UBERON:0000076,2.70e-09,8;UBERON:0001736,7.18e-09,1;UBERON:0006298,7.18e-09,1;UBERON:0001301,9.02e-09,1;UBERON:0004913,9.74e-09,1;UBERON:0003703,9.74e-09,1;UBERON:0001174,9.74e-09,1;UBERON:0004914,9.74e-09,1;UBERON:0001444,1.39e-08,49;UBERON:0001000,1.91e-08,1;UBERON:0005352,1.91e-08,1;UBERON:0002365,1.94e-08,31;UBERON:0002330,1.94e-08,31;UBERON:0003343,2.07e-08,4;UBERON:0004785,2.07e-08,4;UBERON:0000153,2.51e-08,62;UBERON:0007811,2.51e-08,62;UBERON:0005904,3.34e-08,4;UBERON:0003408,2.03e-07,10;UBERON:0000033,2.25e-07,56;UBERON:0000020,2.47e-07,24;UBERON:0001032,2.47e-07,24;UBERON:0004456,2.47e-07,24;UBERON:0000974,2.58e-07,10;UBERON:0001042,5.12e-07,10;UBERON:0009145,5.12e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90019 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19264 | |||
|TSSclassifier=S | |||
|UniProt=Q8NBV8 | |||
|association_with_transcript=-6bp_to_uc009ydb.1_5end | |||
|coexpression_cluster_id=C1138 | |||
|description=CAGE_peak_4_at_SYT8_5end | |||
|id=chr11:1856292..1856320,+ | |||
|ontology_enrichment_celltype=CL:0002076!6.29e-12!43;CL:0000223!5.31e-10!59;CL:0002327!1.69e-07!4;CL:0002251!5.69e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002327;4.46e-18;4!CL:0002541;5.98e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,4.47e-18,4;CL:0002541,6.29e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;1.93e-15;2!UBERON:0010056;1.93e-15;2!UBERON:0006242;3.58e-09;1!UBERON:0006298;7.74e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000166!5.20e-14!21;UBERON:0000161!4.66e-12!35;UBERON:0001044!5.37e-12!6;UBERON:0003293!5.37e-12!6;UBERON:0003294!5.37e-12!6;UBERON:0010047!5.37e-12!6;UBERON:0000167!5.37e-12!6;UBERON:0000165!1.22e-11!28;UBERON:0000930!1.22e-11!28;UBERON:0000078!3.16e-11!18;UBERON:0004119!6.75e-11!169;UBERON:0000925!6.75e-11!169;UBERON:0006595!6.75e-11!169;UBERON:0001004!7.91e-10!72;UBERON:0001723!2.99e-09!3;UBERON:0001033!2.99e-09!3;UBERON:0010056!2.99e-09!3;UBERON:0006947!3.15e-09!3;UBERON:0004054!3.15e-09!3;UBERON:0001444!3.37e-09!48;UBERON:0003729!8.52e-09!5;UBERON:0000077!5.53e-08!130;UBERON:0001007!1.30e-07!155;UBERON:0001555!1.30e-07!155;UBERON:0007026!1.30e-07!155;UBERON:0001911!1.69e-07!4;UBERON:0005333!1.69e-07!4;UBERON:0008425!1.69e-07!4;UBERON:0005311!1.69e-07!4;UBERON:0000344!2.71e-07!12;UBERON:0003408!5.24e-07!10;UBERON:0005904!5.36e-07!4;UBERON:0002294!5.46e-07!7;UBERON:0001173!5.46e-07!7;UBERON:0004912!5.46e-07!7;UBERON:0003343!7.24e-07!4;UBERON:0004785!7.24e-07!4;UBERON:0004175!7.54e-07!25;UBERON:0000974!7.86e-07!10;UBERON:0001041!8.72e-07!98;UBERON:0000341!9.89e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.89e-22;3!UBERON:0001033;2.89e-22;3!UBERON:0001911;4.46e-18;4!UBERON:0002294;2.46e-17;7!UBERON:0001173;2.46e-17;7!UBERON:0000165;2.98e-12;28!UBERON:0001044;4.61e-12;6!UBERON:0003293;4.61e-12;6!UBERON:0003294;4.61e-12;6!UBERON:0010047;4.61e-12;6!UBERON:0003408;4.61e-12;6!UBERON:0000167;4.61e-12;6!UBERON:0000974;8.51e-12;6!UBERON:0000058;8.69e-12;10!UBERON:0002110;2.60e-11;3!UBERON:0003124;5.98e-11;3!UBERON:0000920;5.98e-11;3!UBERON:0006947;1.32e-10;3!UBERON:0004054;1.32e-10;3!UBERON:0000161;8.72e-10;19!UBERON:0000166;8.72e-10;19!UBERON:0001736;7.74e-09;1!UBERON:0001000;1.42e-08;1!UBERON:0001301;1.42e-08;1!UBERON:0004913;1.42e-08;1!UBERON:0003703;1.42e-08;1!UBERON:0005352;1.42e-08;1!UBERON:0001174;1.42e-08;1!UBERON:0004914;1.42e-08;1!UBERON:0003343;2.35e-08;4!UBERON:0004785;2.35e-08;4!UBERON:0002394;3.59e-08;4!UBERON:0005904;3.59e-08;4!UBERON:0003928;3.59e-08;4!UBERON:0002365;5.48e-08;31!UBERON:0002330;5.48e-08;31!UBERON:0000020;1.03e-07;23!UBERON:0001032;2.20e-07;24!UBERON:0004456;2.20e-07;24!UBERON:0005631;3.34e-07;10!UBERON:0000158;3.34e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,3.89e-22,3;UBERON:0001033,3.89e-22,3;UBERON:0010056,3.89e-22,3;UBERON:0001911,4.47e-18,4;UBERON:0005333,4.47e-18,4;UBERON:0008425,4.47e-18,4;UBERON:0005311,4.47e-18,4;UBERON:0000166,9.32e-16,22;UBERON:0002294,1.23e-13,9;UBERON:0001173,1.23e-13,9;UBERON:0004912,1.23e-13,9;UBERON:0001044,4.71e-12,6;UBERON:0003293,4.71e-12,6;UBERON:0003294,4.71e-12,6;UBERON:0010047,4.71e-12,6;UBERON:0000167,4.71e-12,6;UBERON:0000165,9.16e-12,29;UBERON:0000930,9.16e-12,29;UBERON:0002110,2.54e-11,3;UBERON:0006242,2.54e-11,3;UBERON:0000920,6.29e-11,3;UBERON:0006947,1.20e-10,3;UBERON:0004054,1.20e-10,3;UBERON:0000161,2.54e-09,36;UBERON:0000076,2.70e-09,8;UBERON:0001736,7.18e-09,1;UBERON:0006298,7.18e-09,1;UBERON:0001301,9.02e-09,1;UBERON:0004913,9.74e-09,1;UBERON:0003703,9.74e-09,1;UBERON:0001174,9.74e-09,1;UBERON:0004914,9.74e-09,1;UBERON:0001444,1.39e-08,49;UBERON:0001000,1.91e-08,1;UBERON:0005352,1.91e-08,1;UBERON:0002365,1.94e-08,31;UBERON:0002330,1.94e-08,31;UBERON:0003343,2.07e-08,4;UBERON:0004785,2.07e-08,4;UBERON:0000153,2.51e-08,62;UBERON:0007811,2.51e-08,62;UBERON:0005904,3.34e-08,4;UBERON:0003408,2.03e-07,10;UBERON:0000033,2.25e-07,56;UBERON:0000020,2.47e-07,24;UBERON:0001032,2.47e-07,24;UBERON:0004456,2.47e-07,24;UBERON:0000974,2.58e-07,10;UBERON:0001042,5.12e-07,10;UBERON:0009145,5.12e-07,10 | |||
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|short_description=p4@SYT8 | |||
}} |
Revision as of 17:01, 10 September 2013
Short description: | p4@SYT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SYT8_5end |
Coexpression cluster: | C1138_Mammary_salivary_glassy_gall_Small_oral_throat |
Association with transcript: | -6bp_to_uc009ydb.1_5end |
EntrezGene: | SYT8 |
HGNC: | 19264 |
UniProt: | Q8NBV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 4.47e-18 | 4 |
chorionic membrane mesenchymal stem cell | 6.29e-11 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.