FFCP PHASE1:Hg19::chr11:57194530..57194533,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29015|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17466|TSSclassifier=S|UniProt=Q8NBI5|association_with_transcript=-7bp_to_NM_014096,uc001nkg.2,uc009ymf.1_5end|description=CAGE_peak_11_at_SLC43A3_5end|id=chr11:57194530..57194533,-|ontology_enrichment_celltype=CL:0000037!1.53e-29!172;CL:0000566!1.53e-29!172;CL:0002032!6.75e-29!165;CL:0000837!6.75e-29!165;CL:0000988!2.09e-28!182;CL:0000763!2.39e-27!112;CL:0000049!2.39e-27!112;CL:0002057!2.68e-21!42;CL:0000860!7.90e-19!45;CL:0002031!5.05e-18!124;CL:0000839!1.98e-17!70;CL:0000557!5.94e-17!71;CL:0000738!1.54e-16!140;CL:0002087!1.56e-16!119;CL:0002194!6.47e-16!63;CL:0000576!6.47e-16!63;CL:0000040!6.47e-16!63;CL:0000559!6.47e-16!63;CL:0002009!7.45e-16!65;CL:0000766!1.74e-15!76;CL:0000219!4.40e-07!390|ontology_enrichment_celltype_v019=CL:0000860;1.45e-23;33!CL:0002057;1.45e-23;33!CL:0000473;1.78e-15;39!CL:0000234;1.78e-15;39!CL:0000576;3.58e-15;48!CL:0000766;3.00e-08;69!CL:0002087;3.30e-08;104!CL:0000763;1.02e-07;100!CL:0000988;9.06e-07;177|ontology_enrichment_celltype_v019_2=CL:0000037,2.82e-25,168;CL:0002032,3.24e-25,161;CL:0000837,3.24e-25,161;CL:0000988,5.87e-25,177;CL:0000860,1.24e-24,42;CL:0002057,1.24e-24,42;CL:0002087,1.55e-21,115;CL:0000473,6.20e-21,48;CL:0000234,6.20e-21,48;CL:0002031,7.44e-19,120;CL:0000738,2.19e-18,136;CL:0000763,1.89e-17,108;CL:0000049,1.89e-17,108;CL:0002194,8.94e-16,59;CL:0000576,8.94e-16,59;CL:0000040,8.94e-16,59;CL:0000559,8.94e-16,59;CL:0002009,4.12e-15,61;CL:0000557,5.50e-15,67;CL:0000839,1.25e-13,66;CL:0000766,3.99e-12,72;CL:0000219,4.94e-09,386;CL:0000134,3.99e-08,354;CL:0002320,8.90e-08,361;CL:0000542,1.35e-07,53;CL:0000051,1.35e-07,53|ontology_enrichment_development_v019=CL:0002057;1.60e-17;42|ontology_enrichment_disease=DOID:2531!3.13e-21!51;DOID:0060083!3.13e-21!51;DOID:1240!3.93e-17!39;DOID:8692!3.95e-13!31|ontology_enrichment_disease_v019=DOID:1240;5.54e-12;39!DOID:2531;9.56e-11;51!DOID:0060083;9.56e-11;51!DOID:0060058;4.23e-08;10!DOID:74;1.29e-07;2|ontology_enrichment_disease_v019_2=DOID:2531,4.15e-19,51;DOID:0060083,4.15e-19,51;DOID:1240,6.51e-14,39;DOID:0060058,5.30e-08,10;DOID:74,1.83e-07,2|ontology_enrichment_uberon=UBERON:0002390!2.44e-17!102;UBERON:0003061!2.44e-17!102;UBERON:0002193!6.42e-17!112;UBERON:0002371!2.41e-16!80;UBERON:0002405!1.87e-15!115;UBERON:0001474!7.08e-14!86;UBERON:0004765!8.25e-11!101;UBERON:0001434!8.25e-11!101;UBERON:0001737!1.74e-07!9;UBERON:0001557!5.68e-07!19|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-12,76;UBERON:0002390,2.23e-12,98;UBERON:0003061,2.23e-12,98;UBERON:0002405,5.49e-12,93;UBERON:0001474,2.20e-11,82;UBERON:0002193,9.99e-11,108;UBERON:0004765,5.81e-10,90;UBERON:0001434,1.63e-08,100;UBERON:0002384,2.64e-07,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,1.06978768047132,1.06730766284929,0.944529375764151,0.786728553697808,0.383829398097213,0.77408061658038,0,0,0,0.852139206383318,1.13735385989937,0.293600439334847,1.10799081706375,0.200544447470142,1.08505435357926,0,0,0.257575567634187,1.16318591023652,0.755751887377619,1.69808842831471,1.16214518452842,1.6446715520873,1.54853185447552,2.01384674625505,1.5369642391746,0.47296445977717,2.06847408441971,0,1.35426486594342,0.752969358170419,1.09162460023138,1.79778787556068,1.22433556948361,0.641858054152187,0.639337125799041,0.659702600373432,0.398927315243264,0.426224750532694,0.870627715885752,2.26954089876456,1.86846674698672,1.25624332628372,0,0.868755378820466,0.605399502633369,1.84138817993782,2.53169909952708,0,0.637812899895131,0.209658645508376,0.44931452458598,0,0.32145117339416,0.285012743741249,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,1.05353633910031,0.196709770113833,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0.339928028092699,0,0.34362744548263,0,0.318565414324097,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0,0.289648807765598,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0.132957960518865,0.715471872916026,0,1.48583000531826,0,0.860234595106124,0,0,0,0,0.208994966536811,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.113432183160021,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0.161646056818812,0,0.302256294682921,0,0,0.545492241181669,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,1.44606617930089,1.43382164552112,1.30727666455444,0.71181185733329,0.674156540800822,0.98110732562673,1.53898862778556,0,0,0,0,2.53510069643662,0,0,0.441463099414651,0,0.343135620597051,0,0,0.502644862058154,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0.190254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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17466 | |||
|TSSclassifier=S | |||
|UniProt=Q8NBI5 | |||
|association_with_transcript=-7bp_to_NM_014096,uc001nkg.2,uc009ymf.1_5end | |||
|description=CAGE_peak_11_at_SLC43A3_5end | |||
|id=chr11:57194530..57194533,- | |||
|ontology_enrichment_celltype=CL:0000037!1.53e-29!172;CL:0000566!1.53e-29!172;CL:0002032!6.75e-29!165;CL:0000837!6.75e-29!165;CL:0000988!2.09e-28!182;CL:0000763!2.39e-27!112;CL:0000049!2.39e-27!112;CL:0002057!2.68e-21!42;CL:0000860!7.90e-19!45;CL:0002031!5.05e-18!124;CL:0000839!1.98e-17!70;CL:0000557!5.94e-17!71;CL:0000738!1.54e-16!140;CL:0002087!1.56e-16!119;CL:0002194!6.47e-16!63;CL:0000576!6.47e-16!63;CL:0000040!6.47e-16!63;CL:0000559!6.47e-16!63;CL:0002009!7.45e-16!65;CL:0000766!1.74e-15!76;CL:0000219!4.40e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.45e-23;33!CL:0002057;1.45e-23;33!CL:0000473;1.78e-15;39!CL:0000234;1.78e-15;39!CL:0000576;3.58e-15;48!CL:0000766;3.00e-08;69!CL:0002087;3.30e-08;104!CL:0000763;1.02e-07;100!CL:0000988;9.06e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.82e-25,168;CL:0002032,3.24e-25,161;CL:0000837,3.24e-25,161;CL:0000988,5.87e-25,177;CL:0000860,1.24e-24,42;CL:0002057,1.24e-24,42;CL:0002087,1.55e-21,115;CL:0000473,6.20e-21,48;CL:0000234,6.20e-21,48;CL:0002031,7.44e-19,120;CL:0000738,2.19e-18,136;CL:0000763,1.89e-17,108;CL:0000049,1.89e-17,108;CL:0002194,8.94e-16,59;CL:0000576,8.94e-16,59;CL:0000040,8.94e-16,59;CL:0000559,8.94e-16,59;CL:0002009,4.12e-15,61;CL:0000557,5.50e-15,67;CL:0000839,1.25e-13,66;CL:0000766,3.99e-12,72;CL:0000219,4.94e-09,386;CL:0000134,3.99e-08,354;CL:0002320,8.90e-08,361;CL:0000542,1.35e-07,53;CL:0000051,1.35e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;1.60e-17;42 | |||
|ontology_enrichment_disease=DOID:2531!3.13e-21!51;DOID:0060083!3.13e-21!51;DOID:1240!3.93e-17!39;DOID:8692!3.95e-13!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.54e-12;39!DOID:2531;9.56e-11;51!DOID:0060083;9.56e-11;51!DOID:0060058;4.23e-08;10!DOID:74;1.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.15e-19,51;DOID:0060083,4.15e-19,51;DOID:1240,6.51e-14,39;DOID:0060058,5.30e-08,10;DOID:74,1.83e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.44e-17!102;UBERON:0003061!2.44e-17!102;UBERON:0002193!6.42e-17!112;UBERON:0002371!2.41e-16!80;UBERON:0002405!1.87e-15!115;UBERON:0001474!7.08e-14!86;UBERON:0004765!8.25e-11!101;UBERON:0001434!8.25e-11!101;UBERON:0001737!1.74e-07!9;UBERON:0001557!5.68e-07!19 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.19e-12,76;UBERON:0002390,2.23e-12,98;UBERON:0003061,2.23e-12,98;UBERON:0002405,5.49e-12,93;UBERON:0001474,2.20e-11,82;UBERON:0002193,9.99e-11,108;UBERON:0004765,5.81e-10,90;UBERON:0001434,1.63e-08,100;UBERON:0002384,2.64e-07,371 | |||
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| |||
|short_description=p11@SLC43A3 | |||
}} |
Revision as of 18:09, 10 September 2013
Short description: | p11@SLC43A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SLC43A3_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_NM_014096, uc001nkg.2, uc009ymf.1_5end |
EntrezGene: | SLC43A3 |
HGNC: | 17466 |
UniProt: | Q8NBI5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.82e-25 | 168 |
hematopoietic oligopotent progenitor cell | 3.24e-25 | 161 |
hematopoietic multipotent progenitor cell | 3.24e-25 | 161 |
hematopoietic cell | 5.87e-25 | 177 |
classical monocyte | 1.24e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.24e-24 | 42 |
nongranular leukocyte | 1.55e-21 | 115 |
defensive cell | 6.20e-21 | 48 |
phagocyte | 6.20e-21 | 48 |
hematopoietic lineage restricted progenitor cell | 7.44e-19 | 120 |
leukocyte | 2.19e-18 | 136 |
myeloid cell | 1.89e-17 | 108 |
common myeloid progenitor | 1.89e-17 | 108 |
monopoietic cell | 8.94e-16 | 59 |
monocyte | 8.94e-16 | 59 |
monoblast | 8.94e-16 | 59 |
promonocyte | 8.94e-16 | 59 |
macrophage dendritic cell progenitor | 4.12e-15 | 61 |
granulocyte monocyte progenitor cell | 5.50e-15 | 67 |
myeloid lineage restricted progenitor cell | 1.25e-13 | 66 |
myeloid leukocyte | 3.99e-12 | 72 |
motile cell | 4.94e-09 | 386 |
mesenchymal cell | 3.99e-08 | 354 |
connective tissue cell | 8.90e-08 | 361 |
lymphocyte | 1.35e-07 | 53 |
common lymphoid progenitor | 1.35e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.19e-12 | 76 |
hematopoietic system | 2.23e-12 | 98 |
blood island | 2.23e-12 | 98 |
immune system | 5.49e-12 | 93 |
bone element | 2.20e-11 | 82 |
hemolymphoid system | 9.99e-11 | 108 |
skeletal element | 5.81e-10 | 90 |
skeletal system | 1.63e-08 | 100 |
connective tissue | 2.64e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.15e-19 | 51 |
immune system cancer | 4.15e-19 | 51 |
leukemia | 6.51e-14 | 39 |
lymphoma | 5.30e-08 | 10 |
hematopoietic system disease | 1.83e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.