FFCP PHASE1:Hg19::chr12:76424631..76424648,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:76424631..76424648,+|id=chr12:76424631..76424648,+|ontology_enrichment_celltype=CL:0000220!2.44e-09!246;CL:0002321!2.85e-09!248;CL:0000055!6.84e-08!180|ontology_enrichment_celltype_v019=CL:0002567;1.46e-12;3!CL:0002575;1.34e-08;2!CL:0002600;1.34e-08;2!CL:0002602;1.34e-08;2!CL:0000312;3.48e-08;5!CL:0000240;7.10e-07;6!CL:0000311;7.10e-07;6!CL:0000079;7.10e-07;6!CL:0000237;7.10e-07;6!CL:0000147;9.70e-07;14|ontology_enrichment_celltype_v019_2=CL:0002567,1.33e-12,3;CL:0002602,4.19e-09,2;CL:0002600,6.73e-09,2;CL:0002575,3.25e-08,2;CL:0000312,3.77e-08,5;CL:0000240,7.59e-07,6;CL:0000311,7.59e-07,6;CL:0000079,7.59e-07,6;CL:0000237,7.59e-07,6;CL:0000036,7.59e-07,6;CL:0000357,7.59e-07,6;CL:0000114,7.59e-07,6|ontology_enrichment_development_v019=CL:0000357;7.10e-07;6!CL:0000114;7.10e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000922!3.13e-11!612;UBERON:0002050!1.66e-10!605;UBERON:0005423!1.66e-10!605;UBERON:0000923!3.06e-10!604;UBERON:0005291!3.06e-10!604;UBERON:0006598!3.06e-10!604;UBERON:0002532!3.06e-10!604;UBERON:0000481!1.47e-09!347;UBERON:0000468!1.54e-08!659;UBERON:0000475!5.18e-08!365;UBERON:0000119!8.44e-08!312;UBERON:0000467!1.03e-07!625;UBERON:0001444!1.35e-07!48;UBERON:0000480!1.36e-07!626;UBERON:0000483!2.73e-07!309|ontology_enrichment_uberon_v019=UBERON:0006444;1.34e-08;2!UBERON:0001995;1.34e-08;2!UBERON:0004715;1.34e-08;2!UBERON:0011135;2.09e-07;5!UBERON:0002216;2.09e-07;5!UBERON:0011134;2.09e-07;5!UBERON:0002209;2.09e-07;5!UBERON:0002213;2.09e-07;5!UBERON:0007844;2.09e-07;5!UBERON:0011138;2.09e-07;5!UBERON:0001130;2.09e-07;5!UBERON:0001066;2.09e-07;5!UBERON:0001468;2.09e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0006444,4.19e-09,2;UBERON:0001995,4.19e-09,2;UBERON:0004715,4.19e-09,2;UBERON:0011135,1.00e-07,5;UBERON:0002216,1.00e-07,5;UBERON:0011134,1.00e-07,5;UBERON:0002209,1.00e-07,5;UBERON:0002213,1.00e-07,5;UBERON:0005856,1.00e-07,5;UBERON:0005866,1.00e-07,5;UBERON:0005863,1.00e-07,5;UBERON:0007844,1.00e-07,5;UBERON:0011138,1.00e-07,5;UBERON:0001130,1.00e-07,5;UBERON:0001066,1.00e-07,5;UBERON:0001468,1.00e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,1.48519623552056,1.98838425436749,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0.204000691244253,0.313454721478088,0.85870796139317,0.547497700291537,0.376627918784408,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0.401088894940283,0,0,0,0,0.581592955118259,0,0,0.464858073811369,0.411167888021826,0.309706370895104,0.28769239232215,0,0,1.03423704220986,0,0,0.376484679085209,0.545812300115692,0.224723484445085,0.918251677112708,0,0,0,0,0,0.870627715885752,0.56738522469114,0,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,0,0,0.12786256184353,0.722878304769133,0,0.144846518960824,0,0,0.0945348171640679,0,0.087834785693126,0,1.09288586487763,0.370784442784429,0,0.174129737299267,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0,0,0,0,0.66944122552934,0.402829317109147,0,2.4406205754817,0.735326160691737,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0.926864265692532,0,0.354668382198357,0.560677600142307,0,0.74000264525148,0.311211035399766,0.269421344139376,0.490385709340376,0.151357427644931,0,1.17160715916898,0,0,1.19558944441441,0.23486899728753,0.485618833104395,0.140450806702248,0.61246251376468,0.122834317311768,0.413303124703062,1.18800285728205,0.494533858557114,0,1.43723628363248,0.168336113954066,0,0.277064115484183,0,0.612975591598039,0.901428353439581,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,0.966304265816484,0.818238361772504,0.573609190778008,0,0.132529768321485,0.116193942869518,0.10366105501537,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,0,0.982827216677626,0,0,0,1.02940686179115,2.74375713521564,2.24803506515239,2.11110842064425,0.555530670951178,0.977424915930974,1.03993478527958,0,0.34779121492523,0.117408694235822,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.141775097242386,2.86587272649115,2.90633938513962,0.383382679165211,0,0,0,0,0,0,1.52795370223311,1.17217447210047,3.4214489204541,0.616964956219941,0,0.857479297891735,0.112131084345361,0.43596006883328,0.5867062865676,0,0,0,0.531876233169741,0,1.02882949704857,0,1.3321108950805,0.714889968290738,0,1.64648067356154,0.325736184293735,0,0.791951872933429,0,0,0.199945982364114,0,1.00451418286425,0,0,0,0,0,0.61642896765115,0,0.112085143993527,0.19703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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:76424631..76424648,+ | |||
|id=chr12:76424631..76424648,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.44e-09!246;CL:0002321!2.85e-09!248;CL:0000055!6.84e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0002567;1.46e-12;3!CL:0002575;1.34e-08;2!CL:0002600;1.34e-08;2!CL:0002602;1.34e-08;2!CL:0000312;3.48e-08;5!CL:0000240;7.10e-07;6!CL:0000311;7.10e-07;6!CL:0000079;7.10e-07;6!CL:0000237;7.10e-07;6!CL:0000147;9.70e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.33e-12,3;CL:0002602,4.19e-09,2;CL:0002600,6.73e-09,2;CL:0002575,3.25e-08,2;CL:0000312,3.77e-08,5;CL:0000240,7.59e-07,6;CL:0000311,7.59e-07,6;CL:0000079,7.59e-07,6;CL:0000237,7.59e-07,6;CL:0000036,7.59e-07,6;CL:0000357,7.59e-07,6;CL:0000114,7.59e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000357;7.10e-07;6!CL:0000114;7.10e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000922!3.13e-11!612;UBERON:0002050!1.66e-10!605;UBERON:0005423!1.66e-10!605;UBERON:0000923!3.06e-10!604;UBERON:0005291!3.06e-10!604;UBERON:0006598!3.06e-10!604;UBERON:0002532!3.06e-10!604;UBERON:0000481!1.47e-09!347;UBERON:0000468!1.54e-08!659;UBERON:0000475!5.18e-08!365;UBERON:0000119!8.44e-08!312;UBERON:0000467!1.03e-07!625;UBERON:0001444!1.35e-07!48;UBERON:0000480!1.36e-07!626;UBERON:0000483!2.73e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0006444;1.34e-08;2!UBERON:0001995;1.34e-08;2!UBERON:0004715;1.34e-08;2!UBERON:0011135;2.09e-07;5!UBERON:0002216;2.09e-07;5!UBERON:0011134;2.09e-07;5!UBERON:0002209;2.09e-07;5!UBERON:0002213;2.09e-07;5!UBERON:0007844;2.09e-07;5!UBERON:0011138;2.09e-07;5!UBERON:0001130;2.09e-07;5!UBERON:0001066;2.09e-07;5!UBERON:0001468;2.09e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006444,4.19e-09,2;UBERON:0001995,4.19e-09,2;UBERON:0004715,4.19e-09,2;UBERON:0011135,1.00e-07,5;UBERON:0002216,1.00e-07,5;UBERON:0011134,1.00e-07,5;UBERON:0002209,1.00e-07,5;UBERON:0002213,1.00e-07,5;UBERON:0005856,1.00e-07,5;UBERON:0005866,1.00e-07,5;UBERON:0005863,1.00e-07,5;UBERON:0007844,1.00e-07,5;UBERON:0011138,1.00e-07,5;UBERON:0001130,1.00e-07,5;UBERON:0001066,1.00e-07,5;UBERON:0001468,1.00e-07,5 | |||
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| |||
|short_description=p@chr12:76424631..76424648,+ | |||
}} |
Revision as of 00:28, 11 September 2013
Short description: | p@chr12:76424631..76424648, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:76424631..76424648, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.33e-12 | 3 |
annulus pulposus cell | 4.19e-09 | 2 |
smooth muscle cell of trachea | 6.73e-09 | 2 |
central nervous system pericyte | 3.25e-08 | 2 |
keratinocyte | 3.77e-08 | 5 |
stratified squamous epithelial cell | 7.59e-07 | 6 |
keratin accumulating cell | 7.59e-07 | 6 |
stratified epithelial cell | 7.59e-07 | 6 |
keratinizing barrier epithelial cell | 7.59e-07 | 6 |
epithelial fate stem cell | 7.59e-07 | 6 |
stratified epithelial stem cell | 7.59e-07 | 6 |
surface ectodermal cell | 7.59e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
annulus fibrosus | 4.19e-09 | 2 |
fibrocartilage | 4.19e-09 | 2 |
annulus fibrosus disci intervertebralis | 4.19e-09 | 2 |
intervertebral cartilage | 1.00e-07 | 5 |
symphysis | 1.00e-07 | 5 |
nonsynovial joint | 1.00e-07 | 5 |
fibrous joint | 1.00e-07 | 5 |
cartilaginous joint | 1.00e-07 | 5 |
developing mesenchymal condensation | 1.00e-07 | 5 |
pre-cartilage condensation | 1.00e-07 | 5 |
cartilaginous condensation | 1.00e-07 | 5 |
cartilage element | 1.00e-07 | 5 |
post-cranial axial skeletal system | 1.00e-07 | 5 |
vertebral column | 1.00e-07 | 5 |
intervertebral disk | 1.00e-07 | 5 |
intervertebral joint | 1.00e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.