FFCP PHASE1:Hg19::chr14:92361339..92361353,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C470|description=CAGE_peak_at_chr14:92361339..92361353,-|id=chr14:92361339..92361353,-|ontology_enrichment_celltype=CL:0000057!1.06e-30!75;CL:0000055!2.18e-25!180;CL:0002620!1.48e-16!23;CL:0002334!1.50e-11!12;CL:0000048!2.62e-08!430;CL:0000680!8.11e-08!57;CL:0000056!8.11e-08!57;CL:0000355!8.11e-08!57;CL:0000723!1.04e-07!436;CL:0000136!4.37e-07!15;CL:0000034!5.85e-07!444|ontology_enrichment_celltype_v019=CL:0002334;9.34e-19;12!CL:0002620;1.68e-13;23!CL:0000057;1.04e-12;73!CL:0000136;8.07e-12;13!CL:0002551;1.77e-09;6!CL:0002615;6.01e-09;3!CL:0002579;1.14e-08;3!CL:0002580;3.57e-08;3!CL:0002504;8.36e-08;3!CL:1000279;8.36e-08;3!CL:1000280;8.36e-08;3!CL:0002559;1.69e-07;5!CL:0002622;1.81e-07;3!CL:0000346;3.83e-07;3!CL:1000428;3.83e-07;3|ontology_enrichment_celltype_v019_2=CL:0000057,1.12e-29,76;CL:0002334,1.27e-18,12;CL:0002620,6.30e-14,23;CL:0000136,4.12e-12,15;CL:0002551,1.24e-09,6;CL:0000048,1.28e-09,427;CL:0000723,2.95e-09,433;CL:0002615,6.18e-09,3;CL:0000034,8.57e-09,441;CL:0002579,1.13e-08,3;CL:0002580,2.08e-08,3;CL:0002504,5.18e-08,3;CL:1000279,5.18e-08,3;CL:1000280,5.18e-08,3;CL:0002559,7.60e-08,5;CL:0000346,1.41e-07,3;CL:1000428,1.41e-07,3;CL:0002622,1.69e-07,3;CL:0000134,2.34e-07,354;CL:0002320,5.78e-07,361|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;2.26e-08;3!DOID:127;2.26e-08;3|ontology_enrichment_disease_v019_2=DOID:0060084,2.19e-08,3;DOID:127,2.19e-08,3|ontology_enrichment_uberon=UBERON:0003102!2.89e-17!95;UBERON:0002199!6.92e-16!45;UBERON:0002416!6.92e-16!45;UBERON:0000914!6.49e-14!83;UBERON:0002329!6.49e-14!83;UBERON:0003077!6.49e-14!83;UBERON:0003059!6.49e-14!83;UBERON:0007282!6.49e-14!83;UBERON:0009618!6.49e-14!83;UBERON:0007285!6.49e-14!83;UBERON:0002097!1.63e-12!40;UBERON:0004290!2.57e-12!70;UBERON:0000486!1.27e-10!82;UBERON:0000475!1.79e-10!365;UBERON:0002067!4.18e-09!9;UBERON:0004016!4.18e-09!9;UBERON:0010083!4.18e-09!9;UBERON:0002100!1.97e-08!216;UBERON:0004923!2.66e-08!57;UBERON:0005256!3.41e-08!143;UBERON:0002385!4.09e-08!63;UBERON:0001015!4.09e-08!63;UBERON:0000383!4.09e-08!63;UBERON:0003688!7.04e-08!6;UBERON:0002358!7.04e-08!6;UBERON:0003684!7.04e-08!6;UBERON:0001178!7.04e-08!6;UBERON:0004457!1.50e-07!12;UBERON:0000042!1.50e-07!12;UBERON:0001134!1.98e-07!61;UBERON:0002036!1.98e-07!61;UBERON:0003082!1.98e-07!61;UBERON:0000468!5.48e-07!659|ontology_enrichment_uberon_v019=UBERON:0003688;6.33e-16;6!UBERON:0002358;6.33e-16;6!UBERON:0003684;6.33e-16;6!UBERON:0001178;6.33e-16;6!UBERON:0002067;7.09e-15;9!UBERON:0004457;1.77e-13;9!UBERON:0000042;1.77e-13;9!UBERON:0002199;5.76e-12;46!UBERON:0002416;5.76e-12;46!UBERON:0003102;2.37e-11;50!UBERON:0002097;1.90e-10;41!UBERON:0004923;4.56e-08;55!UBERON:0002072;1.28e-07;5!UBERON:0002073;1.69e-07;5!UBERON:0000412;3.83e-07;3!UBERON:0001992;3.83e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.54e-18,46;UBERON:0002416,3.54e-18,46;UBERON:0003102,3.47e-17,99;UBERON:0003688,6.45e-16,6;UBERON:0002358,6.45e-16,6;UBERON:0003684,6.45e-16,6;UBERON:0001178,6.45e-16,6;UBERON:0002067,2.03e-15,9;UBERON:0004016,2.03e-15,9;UBERON:0010083,2.03e-15,9;UBERON:0002097,1.40e-13,41;UBERON:0004923,1.71e-11,66;UBERON:0004457,9.38e-10,12;UBERON:0000042,9.38e-10,12;UBERON:0007524,2.18e-09,73;UBERON:0002100,5.13e-09,199;UBERON:0002329,9.86e-09,71;UBERON:0003059,9.86e-09,71;UBERON:0007282,9.86e-09,71;UBERON:0004290,9.86e-09,71;UBERON:0009618,9.86e-09,71;UBERON:0003077,1.53e-08,72;UBERON:0007285,1.53e-08,72;UBERON:0002073,7.60e-08,5;UBERON:0005086,7.60e-08,5;UBERON:0000412,1.41e-07,3;UBERON:0001992,1.41e-07,3;UBERON:0000486,1.43e-07,83;UBERON:0007503,1.68e-07,78;UBERON:0002072,2.50e-07,5;UBERON:0005256,2.87e-07,122;UBERON:0002384,7.22e-07,371|phase1_expression=10.3556676184217,11.5614282901131,10.007762690814,23.01685862122,24.1358990990735,16.574431957907,15.1979926900986,0.631719873426831,1.04474251279935,0,0,0,0,0,0.662794751455832,1.34465029290355,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,1.50401373190767,0.434539556882471,0,0.973269740605272,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0.759783069987479,0,3.15520282823695,1.06400514659507,1.12135520028461,0,0,0,0.134710672069688,0.163461903113459,0.454072282934794,0,0.70296429550139,0.624320153660641,1.1409436430889,1.64393548606981,1.52664848236894,2.5899671098901,2.66856532734272,0.204154171254893,0.61417158655884,0.619954687054593,1.18800285728205,2.71993622206413,0,1.43723628363248,1.5150250255866,1.7516592782075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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C470 | |||
|description=CAGE_peak_at_chr14:92361339..92361353,- | |||
|id=chr14:92361339..92361353,- | |||
|ontology_enrichment_celltype=CL:0000057!1.06e-30!75;CL:0000055!2.18e-25!180;CL:0002620!1.48e-16!23;CL:0002334!1.50e-11!12;CL:0000048!2.62e-08!430;CL:0000680!8.11e-08!57;CL:0000056!8.11e-08!57;CL:0000355!8.11e-08!57;CL:0000723!1.04e-07!436;CL:0000136!4.37e-07!15;CL:0000034!5.85e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002334;9.34e-19;12!CL:0002620;1.68e-13;23!CL:0000057;1.04e-12;73!CL:0000136;8.07e-12;13!CL:0002551;1.77e-09;6!CL:0002615;6.01e-09;3!CL:0002579;1.14e-08;3!CL:0002580;3.57e-08;3!CL:0002504;8.36e-08;3!CL:1000279;8.36e-08;3!CL:1000280;8.36e-08;3!CL:0002559;1.69e-07;5!CL:0002622;1.81e-07;3!CL:0000346;3.83e-07;3!CL:1000428;3.83e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.12e-29,76;CL:0002334,1.27e-18,12;CL:0002620,6.30e-14,23;CL:0000136,4.12e-12,15;CL:0002551,1.24e-09,6;CL:0000048,1.28e-09,427;CL:0000723,2.95e-09,433;CL:0002615,6.18e-09,3;CL:0000034,8.57e-09,441;CL:0002579,1.13e-08,3;CL:0002580,2.08e-08,3;CL:0002504,5.18e-08,3;CL:1000279,5.18e-08,3;CL:1000280,5.18e-08,3;CL:0002559,7.60e-08,5;CL:0000346,1.41e-07,3;CL:1000428,1.41e-07,3;CL:0002622,1.69e-07,3;CL:0000134,2.34e-07,354;CL:0002320,5.78e-07,361 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.26e-08;3!DOID:127;2.26e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.19e-08,3;DOID:127,2.19e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!2.89e-17!95;UBERON:0002199!6.92e-16!45;UBERON:0002416!6.92e-16!45;UBERON:0000914!6.49e-14!83;UBERON:0002329!6.49e-14!83;UBERON:0003077!6.49e-14!83;UBERON:0003059!6.49e-14!83;UBERON:0007282!6.49e-14!83;UBERON:0009618!6.49e-14!83;UBERON:0007285!6.49e-14!83;UBERON:0002097!1.63e-12!40;UBERON:0004290!2.57e-12!70;UBERON:0000486!1.27e-10!82;UBERON:0000475!1.79e-10!365;UBERON:0002067!4.18e-09!9;UBERON:0004016!4.18e-09!9;UBERON:0010083!4.18e-09!9;UBERON:0002100!1.97e-08!216;UBERON:0004923!2.66e-08!57;UBERON:0005256!3.41e-08!143;UBERON:0002385!4.09e-08!63;UBERON:0001015!4.09e-08!63;UBERON:0000383!4.09e-08!63;UBERON:0003688!7.04e-08!6;UBERON:0002358!7.04e-08!6;UBERON:0003684!7.04e-08!6;UBERON:0001178!7.04e-08!6;UBERON:0004457!1.50e-07!12;UBERON:0000042!1.50e-07!12;UBERON:0001134!1.98e-07!61;UBERON:0002036!1.98e-07!61;UBERON:0003082!1.98e-07!61;UBERON:0000468!5.48e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.33e-16;6!UBERON:0002358;6.33e-16;6!UBERON:0003684;6.33e-16;6!UBERON:0001178;6.33e-16;6!UBERON:0002067;7.09e-15;9!UBERON:0004457;1.77e-13;9!UBERON:0000042;1.77e-13;9!UBERON:0002199;5.76e-12;46!UBERON:0002416;5.76e-12;46!UBERON:0003102;2.37e-11;50!UBERON:0002097;1.90e-10;41!UBERON:0004923;4.56e-08;55!UBERON:0002072;1.28e-07;5!UBERON:0002073;1.69e-07;5!UBERON:0000412;3.83e-07;3!UBERON:0001992;3.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,3.54e-18,46;UBERON:0002416,3.54e-18,46;UBERON:0003102,3.47e-17,99;UBERON:0003688,6.45e-16,6;UBERON:0002358,6.45e-16,6;UBERON:0003684,6.45e-16,6;UBERON:0001178,6.45e-16,6;UBERON:0002067,2.03e-15,9;UBERON:0004016,2.03e-15,9;UBERON:0010083,2.03e-15,9;UBERON:0002097,1.40e-13,41;UBERON:0004923,1.71e-11,66;UBERON:0004457,9.38e-10,12;UBERON:0000042,9.38e-10,12;UBERON:0007524,2.18e-09,73;UBERON:0002100,5.13e-09,199;UBERON:0002329,9.86e-09,71;UBERON:0003059,9.86e-09,71;UBERON:0007282,9.86e-09,71;UBERON:0004290,9.86e-09,71;UBERON:0009618,9.86e-09,71;UBERON:0003077,1.53e-08,72;UBERON:0007285,1.53e-08,72;UBERON:0002073,7.60e-08,5;UBERON:0005086,7.60e-08,5;UBERON:0000412,1.41e-07,3;UBERON:0001992,1.41e-07,3;UBERON:0000486,1.43e-07,83;UBERON:0007503,1.68e-07,78;UBERON:0002072,2.50e-07,5;UBERON:0005256,2.87e-07,122;UBERON:0002384,7.22e-07,371 | |||
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| |||
|short_description=p@chr14:92361339..92361353,- | |||
}} |
Revision as of 05:59, 11 September 2013
Short description: | p@chr14:92361339..92361353, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:92361339..92361353, - |
Coexpression cluster: | C470_Adipocyte_Preadipocyte_Smooth_Fibroblast_aorta_normal_Mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.12e-29 | 76 |
preadipocyte | 1.27e-18 | 12 |
skin fibroblast | 6.30e-14 | 23 |
fat cell | 4.12e-12 | 15 |
fibroblast of dermis | 1.24e-09 | 6 |
multi fate stem cell | 1.28e-09 | 427 |
somatic stem cell | 2.95e-09 | 433 |
adipocyte of omentum tissue | 6.18e-09 | 3 |
stem cell | 8.57e-09 | 441 |
omentum preadipocyte | 1.13e-08 | 3 |
preadipocyte of the breast | 2.08e-08 | 3 |
enteric smooth muscle cell | 5.18e-08 | 3 |
smooth muscle cell of large intestine | 5.18e-08 | 3 |
smooth muscle cell of colon | 5.18e-08 | 3 |
hair follicle cell | 7.60e-08 | 5 |
hair follicle dermal papilla cell | 1.41e-07 | 3 |
stem cell of epidermis | 1.41e-07 | 3 |
prostate stromal cell | 1.69e-07 | 3 |
mesenchymal cell | 2.34e-07 | 354 |
connective tissue cell | 5.78e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
integument | 3.54e-18 | 46 |
integumental system | 3.54e-18 | 46 |
surface structure | 3.47e-17 | 99 |
omentum | 6.45e-16 | 6 |
peritoneum | 6.45e-16 | 6 |
abdominal cavity | 6.45e-16 | 6 |
visceral peritoneum | 6.45e-16 | 6 |
dermis | 2.03e-15 | 9 |
dermatome | 2.03e-15 | 9 |
future dermis | 2.03e-15 | 9 |
skin of body | 1.40e-13 | 41 |
organ component layer | 1.71e-11 | 66 |
cavity lining | 9.38e-10 | 12 |
serous membrane | 9.38e-10 | 12 |
dense mesenchyme tissue | 2.18e-09 | 73 |
trunk | 5.13e-09 | 199 |
somite | 9.86e-09 | 71 |
presomitic mesoderm | 9.86e-09 | 71 |
presumptive segmental plate | 9.86e-09 | 71 |
dermomyotome | 9.86e-09 | 71 |
trunk paraxial mesoderm | 9.86e-09 | 71 |
paraxial mesoderm | 1.53e-08 | 72 |
presumptive paraxial mesoderm | 1.53e-08 | 72 |
hair follicle | 7.60e-08 | 5 |
hair follicle placode | 7.60e-08 | 5 |
dermal papilla | 1.41e-07 | 3 |
papillary layer of dermis | 1.41e-07 | 3 |
multilaminar epithelium | 1.43e-07 | 83 |
epithelial vesicle | 1.68e-07 | 78 |
hypodermis | 2.50e-07 | 5 |
trunk mesenchyme | 2.87e-07 | 122 |
connective tissue | 7.22e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.19e-08 | 3 |
leiomyoma | 2.19e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.