FFCP PHASE1:Hg19::chr14:92979953..92979978,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79890|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18751|TSSclassifier=S|UniProt=Q8TB24|association_with_transcript=-139bp_to_ENST00000216487_5end|description=CAGE_peak_6_at_RIN3_5end|id=chr14:92979953..92979978,+|ontology_enrichment_celltype=CL:0000839!1.49e-08!70;CL:0000766!1.51e-08!76;CL:0000557!3.27e-08!71;CL:0002057!4.92e-08!42;CL:0002194!6.02e-07!63;CL:0000576!6.02e-07!63;CL:0000040!6.02e-07!63;CL:0000559!6.02e-07!63;CL:0002009!9.51e-07!65|ontology_enrichment_celltype_v019=CL:0000473;5.54e-07;39!CL:0000234;5.54e-07;39|ontology_enrichment_celltype_v019_2=CL:0000766,2.64e-11,72;CL:0000557,1.12e-10,67;CL:0000839,2.47e-10,66;CL:0000473,4.10e-10,48;CL:0000234,4.10e-10,48;CL:0002194,1.95e-08,59;CL:0000576,1.95e-08,59;CL:0000040,1.95e-08,59;CL:0000559,1.95e-08,59;CL:0002009,2.01e-08,61;CL:0000860,8.41e-08,42;CL:0002057,8.41e-08,42|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.20e-09!102;UBERON:0003061!9.20e-09!102;UBERON:0002193!3.05e-08!112;UBERON:0002405!8.43e-08!115;UBERON:0001474!1.46e-07!86;UBERON:0002371!1.60e-07!80|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-11,98;UBERON:0003061,1.04e-11,98;UBERON:0002371,1.87e-10,76;UBERON:0001474,1.96e-10,82;UBERON:0002193,3.91e-10,108;UBERON:0002405,1.40e-09,93;UBERON:0004765,3.95e-08,90;UBERON:0001434,8.67e-08,100;UBERON:0003081,6.15e-07,203|phase1_expression=0.54503513781167,0.214100523890983,0.986680828671798,0,0.446961094427288,0,0,1.26343974685366,0.522371256399677,0.737201809504527,0.697801167972428,0.218441372130172,1.58260186937072,0.123766352960047,0.331397375727916,1.34465029290355,1.20538905604795,1.46062018077475,0.975865597581014,0.246242116153576,0.612002073732759,1.56727360739044,0.286235987131057,0.684372125364421,0.125542639594803,1.37544130346312,0.656804715599566,1.02324015707783,1.18009283054671,1.91914699048606,3.8704030829019,0,1.204823675113,0.739508020333575,0,0,0.293600439334847,1.66198622559563,2.4065333696417,3.68918480216948,2.23915474239924,0.971680998056939,2.06060454107349,3.05336301437086,1.51150377475524,1.94067248950253,1.16214518452842,2.05583944010913,0.929119112685311,2.58923153089935,1.0246428261164,1.6553756092201,2.41321976515633,1.29096936716765,0,1.50593871634084,2.45615535052061,0.898893937780338,1.53041946185451,1.60464513538047,0.639337125799041,1.31940520074686,0.797854630486527,2.13112375266347,2.32167390902867,1.13477044938228,0.622822248995575,1.00499466102697,1.0429658368404,1.3031330682307,0.605399502633369,0.368277635987565,0,1.26753171787165,1.4882300997553,0.838634582033504,2.58355851636939,1.65194582125657,1.44653028027372,0.855038231223746,1.9891667719909,1.0959849225878,0,1.63841583378639,0,0,0.400395987036012,0,1.98313461835459,0.954053754535364,2.27685187643779,1.17447437874188,0.382273228125229,0,0.560508562981536,0.526768169550154,0.590129310341499,0,0.616804496998528,1.00311897234407,0.651844533267181,0,0,0.222820913770347,0.589211814949674,0,0,1.92136979588513,0.650296737799391,1.80881695064044,1.10540007114339,2.02862160014537,1.33457906845854,0.802622484269139,1.04535523804977,0.226618685395132,0.766440987203842,1.03088233644789,0,0.637130828648193,0.651083453856419,1.90090408889675,0.752875595388864,0.895906278080929,0,0.947109008176067,0.821127996921047,3.02410114837099,3.7441627409691,2.02754165435919,0,0,1.02290049474824,0.361439152384566,2.50668955317945,1.88300474649071,0,3.40644409211845,0.189069634328136,0.443458794925128,0.263504357079378,1.0478326039817,1.45718115317017,2.22470665670658,0.324547393654683,1.0447784237956,1.72845348674525,0,0,0,0.39752481473341,0,0,0.56530794192401,0.419499436209906,0.275118041940067,0.626984899610432,0.516833518338658,0.71153252537342,0.33472061276467,0.402829317109147,0,1.22031028774085,0,0,0,0,0.450445921933289,1.53316637465883,0,0.732806975721629,2.63560834872127,0,1.3082821564276,1.49091585508596,0.759783069987479,0.529636723252875,0.286836620748814,0.709336764396714,1.12135520028461,0,1.48000529050296,0.622422070799533,0.67355336034844,0.326923806226917,0.605429710579726,0,1.87457145467037,0,2.2818872861778,2.09228152772521,1.52664848236894,0.647491777472526,1.54495887372473,1.83738754129404,0.61417158655884,2.58314452939414,0,1.7308685049499,2.73048408581408,1.43723628363248,0.505008341862199,1.00094815897571,1.10825646193673,0.877955241761676,1.22595118319608,1.20190447125277,0.226864366320042,0.179389635688862,1.70845911054854,1.48352330811693,0,1.03052529238439,0.515281080091258,0.558350568994769,0.337552664482532,1.16924406193438,1.00973509697646,0.920498986422993,1.2931684545505,0.355009592516614,0.806016785821122,0.847802961552438,2.31913023795956,1.09098448236334,0.860413786167011,0,0,0.116193942869518,0.207322110030741,0,0,3.12899064659632,1.28648187638577,6.90674606762403,0,0,0.118306800039844,0,0.48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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18751 | |||
|TSSclassifier=S | |||
|UniProt=Q8TB24 | |||
|association_with_transcript=-139bp_to_ENST00000216487_5end | |||
|description=CAGE_peak_6_at_RIN3_5end | |||
|id=chr14:92979953..92979978,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.49e-08!70;CL:0000766!1.51e-08!76;CL:0000557!3.27e-08!71;CL:0002057!4.92e-08!42;CL:0002194!6.02e-07!63;CL:0000576!6.02e-07!63;CL:0000040!6.02e-07!63;CL:0000559!6.02e-07!63;CL:0002009!9.51e-07!65 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.54e-07;39!CL:0000234;5.54e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.64e-11,72;CL:0000557,1.12e-10,67;CL:0000839,2.47e-10,66;CL:0000473,4.10e-10,48;CL:0000234,4.10e-10,48;CL:0002194,1.95e-08,59;CL:0000576,1.95e-08,59;CL:0000040,1.95e-08,59;CL:0000559,1.95e-08,59;CL:0002009,2.01e-08,61;CL:0000860,8.41e-08,42;CL:0002057,8.41e-08,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.20e-09!102;UBERON:0003061!9.20e-09!102;UBERON:0002193!3.05e-08!112;UBERON:0002405!8.43e-08!115;UBERON:0001474!1.46e-07!86;UBERON:0002371!1.60e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-11,98;UBERON:0003061,1.04e-11,98;UBERON:0002371,1.87e-10,76;UBERON:0001474,1.96e-10,82;UBERON:0002193,3.91e-10,108;UBERON:0002405,1.40e-09,93;UBERON:0004765,3.95e-08,90;UBERON:0001434,8.67e-08,100;UBERON:0003081,6.15e-07,203 | |||
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| |||
|short_description=p6@RIN3 | |||
}} |
Revision as of 06:00, 11 September 2013
Short description: | p6@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RIN3_5end |
Coexpression cluster: | NA |
Association with transcript: | -139bp_to_ENST00000216487_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | Q8TB24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.64e-11 | 72 |
granulocyte monocyte progenitor cell | 1.12e-10 | 67 |
myeloid lineage restricted progenitor cell | 2.47e-10 | 66 |
defensive cell | 4.10e-10 | 48 |
phagocyte | 4.10e-10 | 48 |
monopoietic cell | 1.95e-08 | 59 |
monocyte | 1.95e-08 | 59 |
monoblast | 1.95e-08 | 59 |
promonocyte | 1.95e-08 | 59 |
macrophage dendritic cell progenitor | 2.01e-08 | 61 |
classical monocyte | 8.41e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.41e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-11 | 98 |
blood island | 1.04e-11 | 98 |
bone marrow | 1.87e-10 | 76 |
bone element | 1.96e-10 | 82 |
hemolymphoid system | 3.91e-10 | 108 |
immune system | 1.40e-09 | 93 |
skeletal element | 3.95e-08 | 90 |
skeletal system | 8.67e-08 | 100 |
lateral plate mesoderm | 6.15e-07 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.