FFCP PHASE1:Hg19::chr14:93117860..93117876,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79890|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=18751|TSSclassifier=S|UniProt=Q8TB24|association_with_transcript=-50bp_to_uc001yar.1,uc001yas.1_5end|coexpression_cluster_id=C57|description=CAGE_peak_9_at_RIN3_5end|id=chr14:93117860..93117876,+|ontology_enrichment_celltype=CL:0000037!8.99e-77!172;CL:0000566!8.99e-77!172;CL:0000988!1.37e-73!182;CL:0002032!2.95e-72!165;CL:0000837!2.95e-72!165;CL:0000738!5.38e-67!140;CL:0002087!1.05e-54!119;CL:0002031!1.40e-54!124;CL:0000763!9.01e-38!112;CL:0000049!9.01e-38!112;CL:0000542!4.85e-31!53;CL:0000051!4.85e-31!53;CL:0000838!2.87e-30!52;CL:0000766!1.80e-28!76;CL:0000557!3.31e-24!71;CL:0000839!1.06e-23!70;CL:0002057!8.07e-23!42;CL:0000860!2.16e-20!45;CL:0002194!2.83e-20!63;CL:0000576!2.83e-20!63;CL:0000040!2.83e-20!63;CL:0000559!2.83e-20!63;CL:0002009!4.25e-20!65;CL:0000945!1.13e-15!24;CL:0000826!1.13e-15!24;CL:0000134!1.72e-15!358;CL:0000791!1.77e-15!18;CL:0000789!1.77e-15!18;CL:0002420!1.77e-15!18;CL:0002419!1.77e-15!18;CL:0000790!1.77e-15!18;CL:0002320!1.87e-14!365;CL:0000084!3.86e-13!25;CL:0000827!3.86e-13!25;CL:0000219!2.73e-11!390;CL:0000236!3.91e-11!14;CL:0000625!9.67e-11!11;CL:0000624!1.10e-07!6;CL:0000034!1.30e-07!444;CL:0000048!1.39e-07!430;CL:0000723!4.80e-07!436|ontology_enrichment_celltype_v019=CL:0000791;1.07e-18;18!CL:0000789;1.07e-18;18!CL:0002419;1.07e-18;18!CL:0000542;3.42e-18;53!CL:0000860;4.08e-16;33!CL:0002057;4.08e-16;33!CL:0000945;1.54e-15;24!CL:0002087;1.88e-15;104!CL:0000084;4.92e-14;25!CL:0000236;1.45e-13;13!CL:0000738;1.99e-12;136!CL:0000473;8.94e-12;39!CL:0000234;8.94e-12;39!CL:0000625;3.54e-11;11!CL:0000988;4.92e-11;177!CL:0000624;6.78e-11;6!CL:0000576;7.19e-10;48!CL:0000766;1.18e-09;69!CL:0000763;2.83e-09;100!CL:0000097;1.84e-07;5!CL:0000094;7.76e-07;8|ontology_enrichment_celltype_v019_2=CL:0000037,1.67e-59,168;CL:0002032,1.37e-57,161;CL:0000837,1.37e-57,161;CL:0000988,4.03e-55,177;CL:0000738,5.57e-54,136;CL:0002087,6.46e-44,115;CL:0002031,3.01e-42,120;CL:0000542,2.73e-33,53;CL:0000051,2.73e-33,53;CL:0000838,3.47e-32,52;CL:0000763,1.87e-24,108;CL:0000049,1.87e-24,108;CL:0000766,9.35e-19,72;CL:0000791,1.18e-18,18;CL:0000789,1.18e-18,18;CL:0002420,1.18e-18,18;CL:0002419,1.18e-18,18;CL:0000790,1.18e-18,18;CL:0000945,1.40e-15,24;CL:0000826,1.40e-15,24;CL:0000134,2.50e-15,354;CL:0000860,2.81e-15,42;CL:0002057,2.81e-15,42;CL:0000236,1.02e-14,14;CL:0002320,1.46e-14,361;CL:0000557,3.47e-14,67;CL:0000084,5.14e-14,25;CL:0000827,5.14e-14,25;CL:0000839,1.59e-13,66;CL:0000473,1.70e-12,48;CL:0000234,1.70e-12,48;CL:0000219,6.72e-12,386;CL:0000625,4.27e-11,11;CL:0000624,6.00e-11,6;CL:0002194,2.09e-10,59;CL:0000576,2.09e-10,59;CL:0000040,2.09e-10,59;CL:0000559,2.09e-10,59;CL:0002009,7.59e-10,61;CL:0000048,9.66e-09,427;CL:0000034,1.27e-08,441;CL:0000723,2.56e-08,433;CL:0000097,1.38e-07,5;CL:0002028,1.38e-07,5;CL:0000094,7.40e-07,8|ontology_enrichment_development_v019=CL:0000790;1.07e-18;18!CL:0000051;3.42e-18;53!CL:0002057;2.30e-12;42!CL:0000049;8.57e-08;108|ontology_enrichment_disease=DOID:2531!4.12e-08!51;DOID:0060083!4.12e-08!51;DOID:1240!4.16e-08!39;DOID:8692!8.06e-08!31|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!3.62e-35!102;UBERON:0003061!3.62e-35!102;UBERON:0002193!4.78e-32!112;UBERON:0002371!2.13e-20!80;UBERON:0001474!9.92e-18!86;UBERON:0002405!3.94e-16!115;UBERON:0000178!2.60e-14!15;UBERON:0000179!2.60e-14!15;UBERON:0000463!2.60e-14!15;UBERON:0002384!1.78e-13!375;UBERON:0004765!1.34e-12!101;UBERON:0001434!1.34e-12!101;UBERON:0003081!9.53e-08!216|ontology_enrichment_uberon_v019=UBERON:0000178;5.38e-15;15!UBERON:0000179;5.38e-15;15!UBERON:0000463;5.38e-15;15!UBERON:0002390;5.25e-10;32!UBERON:0002193;7.09e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.14e-24,98;UBERON:0003061,1.14e-24,98;UBERON:0002193,2.47e-23,108;UBERON:0000178,4.68e-15,15;UBERON:0000179,4.68e-15,15;UBERON:0000463,4.68e-15,15;UBERON:0002405,1.48e-13,93;UBERON:0002384,1.59e-13,371;UBERON:0002371,1.72e-11,76;UBERON:0001474,4.78e-10,82;UBERON:0004765,1.90e-08,90;UBERON:0001434,7.54e-07,100|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11969818511273,5.00813595644669,4.5652253161934,3.14691421479123,1.15148819429164,0.928896739896456,0,0,0,0.0774672005803016,0.568676929949686,0.587200878669695,0.553995408531877,3.60980005446255,1.73608696572681,0.671746422719773,1.6194683300949,1.03030227053675,1.59938062657521,2.26725566213286,3.63876091781724,1.85943229524548,1.23350366406548,1.54853185447552,0.863077176966451,2.0492856522328,1.41889337933151,1.37898272294647,3.22742341791913,0,2.63539275359647,1.63743690034707,1.79778787556068,0.918251677112708,0.641858054152187,1.27867425159808,3.29851300186716,3.39088217956774,3.83602275479425,2.03146467040009,0.56738522469114,3.11411124497787,0.75374599577023,1.5644487552606,0.434377689410233,0,1.10483290796269,0.316462387440884,0.422510572623884,0.425208599930087,0.419317291016752,1.909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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79890 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=18751 | |||
|TSSclassifier=S | |||
|UniProt=Q8TB24 | |||
|association_with_transcript=-50bp_to_uc001yar.1,uc001yas.1_5end | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_9_at_RIN3_5end | |||
|id=chr14:93117860..93117876,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.99e-77!172;CL:0000566!8.99e-77!172;CL:0000988!1.37e-73!182;CL:0002032!2.95e-72!165;CL:0000837!2.95e-72!165;CL:0000738!5.38e-67!140;CL:0002087!1.05e-54!119;CL:0002031!1.40e-54!124;CL:0000763!9.01e-38!112;CL:0000049!9.01e-38!112;CL:0000542!4.85e-31!53;CL:0000051!4.85e-31!53;CL:0000838!2.87e-30!52;CL:0000766!1.80e-28!76;CL:0000557!3.31e-24!71;CL:0000839!1.06e-23!70;CL:0002057!8.07e-23!42;CL:0000860!2.16e-20!45;CL:0002194!2.83e-20!63;CL:0000576!2.83e-20!63;CL:0000040!2.83e-20!63;CL:0000559!2.83e-20!63;CL:0002009!4.25e-20!65;CL:0000945!1.13e-15!24;CL:0000826!1.13e-15!24;CL:0000134!1.72e-15!358;CL:0000791!1.77e-15!18;CL:0000789!1.77e-15!18;CL:0002420!1.77e-15!18;CL:0002419!1.77e-15!18;CL:0000790!1.77e-15!18;CL:0002320!1.87e-14!365;CL:0000084!3.86e-13!25;CL:0000827!3.86e-13!25;CL:0000219!2.73e-11!390;CL:0000236!3.91e-11!14;CL:0000625!9.67e-11!11;CL:0000624!1.10e-07!6;CL:0000034!1.30e-07!444;CL:0000048!1.39e-07!430;CL:0000723!4.80e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.07e-18;18!CL:0000789;1.07e-18;18!CL:0002419;1.07e-18;18!CL:0000542;3.42e-18;53!CL:0000860;4.08e-16;33!CL:0002057;4.08e-16;33!CL:0000945;1.54e-15;24!CL:0002087;1.88e-15;104!CL:0000084;4.92e-14;25!CL:0000236;1.45e-13;13!CL:0000738;1.99e-12;136!CL:0000473;8.94e-12;39!CL:0000234;8.94e-12;39!CL:0000625;3.54e-11;11!CL:0000988;4.92e-11;177!CL:0000624;6.78e-11;6!CL:0000576;7.19e-10;48!CL:0000766;1.18e-09;69!CL:0000763;2.83e-09;100!CL:0000097;1.84e-07;5!CL:0000094;7.76e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.67e-59,168;CL:0002032,1.37e-57,161;CL:0000837,1.37e-57,161;CL:0000988,4.03e-55,177;CL:0000738,5.57e-54,136;CL:0002087,6.46e-44,115;CL:0002031,3.01e-42,120;CL:0000542,2.73e-33,53;CL:0000051,2.73e-33,53;CL:0000838,3.47e-32,52;CL:0000763,1.87e-24,108;CL:0000049,1.87e-24,108;CL:0000766,9.35e-19,72;CL:0000791,1.18e-18,18;CL:0000789,1.18e-18,18;CL:0002420,1.18e-18,18;CL:0002419,1.18e-18,18;CL:0000790,1.18e-18,18;CL:0000945,1.40e-15,24;CL:0000826,1.40e-15,24;CL:0000134,2.50e-15,354;CL:0000860,2.81e-15,42;CL:0002057,2.81e-15,42;CL:0000236,1.02e-14,14;CL:0002320,1.46e-14,361;CL:0000557,3.47e-14,67;CL:0000084,5.14e-14,25;CL:0000827,5.14e-14,25;CL:0000839,1.59e-13,66;CL:0000473,1.70e-12,48;CL:0000234,1.70e-12,48;CL:0000219,6.72e-12,386;CL:0000625,4.27e-11,11;CL:0000624,6.00e-11,6;CL:0002194,2.09e-10,59;CL:0000576,2.09e-10,59;CL:0000040,2.09e-10,59;CL:0000559,2.09e-10,59;CL:0002009,7.59e-10,61;CL:0000048,9.66e-09,427;CL:0000034,1.27e-08,441;CL:0000723,2.56e-08,433;CL:0000097,1.38e-07,5;CL:0002028,1.38e-07,5;CL:0000094,7.40e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.07e-18;18!CL:0000051;3.42e-18;53!CL:0002057;2.30e-12;42!CL:0000049;8.57e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!4.12e-08!51;DOID:0060083!4.12e-08!51;DOID:1240!4.16e-08!39;DOID:8692!8.06e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.62e-35!102;UBERON:0003061!3.62e-35!102;UBERON:0002193!4.78e-32!112;UBERON:0002371!2.13e-20!80;UBERON:0001474!9.92e-18!86;UBERON:0002405!3.94e-16!115;UBERON:0000178!2.60e-14!15;UBERON:0000179!2.60e-14!15;UBERON:0000463!2.60e-14!15;UBERON:0002384!1.78e-13!375;UBERON:0004765!1.34e-12!101;UBERON:0001434!1.34e-12!101;UBERON:0003081!9.53e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.38e-15;15!UBERON:0000179;5.38e-15;15!UBERON:0000463;5.38e-15;15!UBERON:0002390;5.25e-10;32!UBERON:0002193;7.09e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.14e-24,98;UBERON:0003061,1.14e-24,98;UBERON:0002193,2.47e-23,108;UBERON:0000178,4.68e-15,15;UBERON:0000179,4.68e-15,15;UBERON:0000463,4.68e-15,15;UBERON:0002405,1.48e-13,93;UBERON:0002384,1.59e-13,371;UBERON:0002371,1.72e-11,76;UBERON:0001474,4.78e-10,82;UBERON:0004765,1.90e-08,90;UBERON:0001434,7.54e-07,100 | |||
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| |||
|short_description=p9@RIN3 | |||
}} |
Revision as of 06:01, 11 September 2013
Short description: | p9@RIN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_RIN3_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -50bp_to_uc001yar.1, uc001yas.1_5end |
EntrezGene: | RIN3 |
HGNC: | 18751 |
UniProt: | Q8TB24 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.14e-24 | 98 |
blood island | 1.14e-24 | 98 |
hemolymphoid system | 2.47e-23 | 108 |
blood | 4.68e-15 | 15 |
haemolymphatic fluid | 4.68e-15 | 15 |
organism substance | 4.68e-15 | 15 |
immune system | 1.48e-13 | 93 |
connective tissue | 1.59e-13 | 371 |
bone marrow | 1.72e-11 | 76 |
bone element | 4.78e-10 | 82 |
skeletal element | 1.90e-08 | 90 |
skeletal system | 7.54e-07 | 100 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.