FFCP PHASE1:Hg19::chr14:94856989..94857000,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5265|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8941|TSSclassifier=S|UniProt=P01009|association_with_transcript=0bp_to_ENST00000404814_5end|coexpression_cluster_id=C26|description=CAGE_peak_4_at_SERPINA1_5end|id=chr14:94856989..94857000,-|ontology_enrichment_celltype=CL:0000766!2.53e-32!76;CL:0002194!6.04e-31!63;CL:0000576!6.04e-31!63;CL:0000040!6.04e-31!63;CL:0000559!6.04e-31!63;CL:0002057!7.17e-31!42;CL:0002009!3.13e-30!65;CL:0000860!5.94e-27!45;CL:0000557!2.43e-25!71;CL:0000839!5.05e-25!70;CL:0000738!3.52e-21!140;CL:0000763!1.46e-19!112;CL:0000049!1.46e-19!112;CL:0002087!2.49e-19!119;CL:0002031!4.11e-15!124;CL:0000037!1.79e-14!172;CL:0000566!1.79e-14!172;CL:0002032!4.78e-14!165;CL:0000837!4.78e-14!165;CL:0000988!9.60e-13!182;CL:0002393!7.06e-08!9;CL:0002397!7.06e-08!9;CL:0000094!3.99e-07!8|ontology_enrichment_celltype_v019=CL:0000860;5.49e-29;33!CL:0002057;5.49e-29;33!CL:0000473;2.87e-28;39!CL:0000234;2.87e-28;39!CL:0000576;6.98e-25;48!CL:0000766;2.22e-19;69!CL:0000763;1.28e-09;100!CL:0000094;6.18e-09;8!CL:0002087;9.90e-09;104!CL:0000738;2.00e-07;136!CL:0002393;6.00e-07;6!CL:0002397;6.00e-07;6|ontology_enrichment_celltype_v019_2=CL:0000766,1.14e-45,72;CL:0000473,2.63e-45,48;CL:0000234,2.63e-45,48;CL:0002194,2.21e-43,59;CL:0000576,2.21e-43,59;CL:0000040,2.21e-43,59;CL:0000559,2.21e-43,59;CL:0002009,1.24e-42,61;CL:0000860,1.96e-40,42;CL:0002057,1.96e-40,42;CL:0000557,1.46e-36,67;CL:0000839,3.81e-36,66;CL:0000763,2.70e-30,108;CL:0000049,2.70e-30,108;CL:0000738,3.85e-30,136;CL:0002087,1.60e-27,115;CL:0000037,1.60e-23,168;CL:0002031,8.02e-23,120;CL:0002032,1.78e-22,161;CL:0000837,1.78e-22,161;CL:0000988,1.20e-20,177;CL:0002393,6.26e-10,9;CL:0002397,6.26e-10,9;CL:0000094,6.17e-09,8|ontology_enrichment_development_v019=CL:0002057;4.40e-29;42!CL:0000049;2.42e-09;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.52e-28!115;UBERON:0002390!2.02e-25!102;UBERON:0003061!2.02e-25!102;UBERON:0002193!2.78e-22!112;UBERON:0002371!2.80e-20!80;UBERON:0002405!1.10e-18!115;UBERON:0001474!4.90e-18!86;UBERON:0004765!5.31e-14!101;UBERON:0001434!5.31e-14!101;UBERON:0000062!7.32e-10!511|ontology_enrichment_uberon_v019=UBERON:0000178;9.82e-08;15!UBERON:0000179;9.82e-08;15!UBERON:0000463;9.82e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.61e-37,98;UBERON:0003061,2.61e-37,98;UBERON:0002193,1.77e-33,108;UBERON:0002371,2.34e-30,76;UBERON:0002405,1.18e-26,93;UBERON:0001474,2.25e-26,82;UBERON:0007023,1.57e-22,114;UBERON:0004765,5.84e-22,90;UBERON:0001434,3.51e-18,100;UBERON:0003081,6.42e-10,203;UBERON:0000178,9.94e-08,15;UBERON:0000179,9.94e-08,15;UBERON:0000463,9.94e-08,15|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.436882744260345,0.263766978228454,0.495065411840187,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0.246301768349837,0.157421562627358,119.582740162067,53.7361157336098,88.2451902901633,0,0,1.10926203050036,0,0.142169232487422,0,62.6014811641022,79.4156011981761,64.452228602608,22.3915474239924,22.3486629553096,27.560585736858,59.1770831832828,91.0681024290031,95.5781201079996,98.782340684916,97.4467894611727,99.4157450573283,91.773873150766,119.114728536032,117.05870379485,95.4945535640433,80.0401007643944,88.0272162863221,82.4501447196609,95.2442463701882,93.9344164980454,87.2339093257072,142.813417048862,113.802008392229,94.3374718534008,113.095893871465,120.19537965022,150.618594848235,165.676485609813,199.303119678584,92.4595088144815,96.9958228261575,126.186718773673,127.133895553007,179.719486361932,152.534870746506,138.583467820634,132.239874578257,131.036653442735,99.9724817203806,91.0071970619528,149.956972388376,134.241002302128,182.207676314367,198.007942680863,0,0.546138611262131,0,4.26730222566507,0,1.14950487990897,1.98313461835459,0.954053754535364,1.1384259382189,2.34894875748376,1.52909291250092,1.32171328579026,12.3311883855938,0.263384084775077,0,0,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27426165729639,0,0,4.81840381048873,2.94369205655162,2.49861453104692,4.73554504088034,2.46338399076314,0,0,0,2.43806866313962,0,0,0,0,0,1.5905718941022,1.45990461090791,0.0945348171640679,0.221729397462564,0.087834785693126,6.48346423713678,0.364295288292542,0.370784442784429,3.24547393654683,4.35324343248168,8.50930947320737,3.57735936458013,2.28797964312051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,130.462613261703,155.11210565933,0,0,0.12663051166458,0,0.860509862246441,2.4826786753885,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.206651562351531,0,0,0.910161361938026,0,0,0,0,0,0,0.45071417671979,0,0,0,0.211931901159562,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.36373060295417,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,1.6462960453256,0,62.1099670626971,39.313088667105,44.3092430011053,0,0.245976877086227,0.514703430895577,0.219500570817251,1.1240175325762,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5265 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8941 | |||
|TSSclassifier=S | |||
|UniProt=P01009 | |||
|association_with_transcript=0bp_to_ENST00000404814_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_4_at_SERPINA1_5end | |||
|id=chr14:94856989..94857000,- | |||
|ontology_enrichment_celltype=CL:0000766!2.53e-32!76;CL:0002194!6.04e-31!63;CL:0000576!6.04e-31!63;CL:0000040!6.04e-31!63;CL:0000559!6.04e-31!63;CL:0002057!7.17e-31!42;CL:0002009!3.13e-30!65;CL:0000860!5.94e-27!45;CL:0000557!2.43e-25!71;CL:0000839!5.05e-25!70;CL:0000738!3.52e-21!140;CL:0000763!1.46e-19!112;CL:0000049!1.46e-19!112;CL:0002087!2.49e-19!119;CL:0002031!4.11e-15!124;CL:0000037!1.79e-14!172;CL:0000566!1.79e-14!172;CL:0002032!4.78e-14!165;CL:0000837!4.78e-14!165;CL:0000988!9.60e-13!182;CL:0002393!7.06e-08!9;CL:0002397!7.06e-08!9;CL:0000094!3.99e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.49e-29;33!CL:0002057;5.49e-29;33!CL:0000473;2.87e-28;39!CL:0000234;2.87e-28;39!CL:0000576;6.98e-25;48!CL:0000766;2.22e-19;69!CL:0000763;1.28e-09;100!CL:0000094;6.18e-09;8!CL:0002087;9.90e-09;104!CL:0000738;2.00e-07;136!CL:0002393;6.00e-07;6!CL:0002397;6.00e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.14e-45,72;CL:0000473,2.63e-45,48;CL:0000234,2.63e-45,48;CL:0002194,2.21e-43,59;CL:0000576,2.21e-43,59;CL:0000040,2.21e-43,59;CL:0000559,2.21e-43,59;CL:0002009,1.24e-42,61;CL:0000860,1.96e-40,42;CL:0002057,1.96e-40,42;CL:0000557,1.46e-36,67;CL:0000839,3.81e-36,66;CL:0000763,2.70e-30,108;CL:0000049,2.70e-30,108;CL:0000738,3.85e-30,136;CL:0002087,1.60e-27,115;CL:0000037,1.60e-23,168;CL:0002031,8.02e-23,120;CL:0002032,1.78e-22,161;CL:0000837,1.78e-22,161;CL:0000988,1.20e-20,177;CL:0002393,6.26e-10,9;CL:0002397,6.26e-10,9;CL:0000094,6.17e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;4.40e-29;42!CL:0000049;2.42e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.52e-28!115;UBERON:0002390!2.02e-25!102;UBERON:0003061!2.02e-25!102;UBERON:0002193!2.78e-22!112;UBERON:0002371!2.80e-20!80;UBERON:0002405!1.10e-18!115;UBERON:0001474!4.90e-18!86;UBERON:0004765!5.31e-14!101;UBERON:0001434!5.31e-14!101;UBERON:0000062!7.32e-10!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.82e-08;15!UBERON:0000179;9.82e-08;15!UBERON:0000463;9.82e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.61e-37,98;UBERON:0003061,2.61e-37,98;UBERON:0002193,1.77e-33,108;UBERON:0002371,2.34e-30,76;UBERON:0002405,1.18e-26,93;UBERON:0001474,2.25e-26,82;UBERON:0007023,1.57e-22,114;UBERON:0004765,5.84e-22,90;UBERON:0001434,3.51e-18,100;UBERON:0003081,6.42e-10,203;UBERON:0000178,9.94e-08,15;UBERON:0000179,9.94e-08,15;UBERON:0000463,9.94e-08,15 | |||
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| |||
|short_description=p4@SERPINA1 | |||
}} |
Revision as of 06:09, 11 September 2013
Short description: | p4@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SERPINA1_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000404814_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.14e-45 | 72 |
defensive cell | 2.63e-45 | 48 |
phagocyte | 2.63e-45 | 48 |
monopoietic cell | 2.21e-43 | 59 |
monocyte | 2.21e-43 | 59 |
monoblast | 2.21e-43 | 59 |
promonocyte | 2.21e-43 | 59 |
macrophage dendritic cell progenitor | 1.24e-42 | 61 |
classical monocyte | 1.96e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-40 | 42 |
granulocyte monocyte progenitor cell | 1.46e-36 | 67 |
myeloid lineage restricted progenitor cell | 3.81e-36 | 66 |
myeloid cell | 2.70e-30 | 108 |
common myeloid progenitor | 2.70e-30 | 108 |
leukocyte | 3.85e-30 | 136 |
nongranular leukocyte | 1.60e-27 | 115 |
hematopoietic stem cell | 1.60e-23 | 168 |
hematopoietic lineage restricted progenitor cell | 8.02e-23 | 120 |
hematopoietic oligopotent progenitor cell | 1.78e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.78e-22 | 161 |
hematopoietic cell | 1.20e-20 | 177 |
intermediate monocyte | 6.26e-10 | 9 |
CD14-positive, CD16-positive monocyte | 6.26e-10 | 9 |
granulocyte | 6.17e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.61e-37 | 98 |
blood island | 2.61e-37 | 98 |
hemolymphoid system | 1.77e-33 | 108 |
bone marrow | 2.34e-30 | 76 |
immune system | 1.18e-26 | 93 |
bone element | 2.25e-26 | 82 |
adult organism | 1.57e-22 | 114 |
skeletal element | 5.84e-22 | 90 |
skeletal system | 3.51e-18 | 100 |
lateral plate mesoderm | 6.42e-10 | 203 |
blood | 9.94e-08 | 15 |
haemolymphatic fluid | 9.94e-08 | 15 |
organism substance | 9.94e-08 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.