FFCP PHASE1:Hg19::chr15:51520746..51520771,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr15:51520746..51520771,-|id=chr15:51520746..51520771,-|ontology_enrichment_celltype=CL:0000048!3.71e-21!430;CL:0000723!3.19e-20!436;CL:0000034!3.40e-20!444;CL:0002320!9.63e-18!365;CL:0002057!5.20e-17!42;CL:0000134!6.17e-17!358;CL:0000860!4.46e-16!45;CL:0000219!2.31e-15!390;CL:0002194!8.73e-14!63;CL:0000576!8.73e-14!63;CL:0000040!8.73e-14!63;CL:0000559!8.73e-14!63;CL:0002371!1.97e-13!591;CL:0002009!5.44e-13!65;CL:0000144!6.31e-12!625;CL:0000766!8.89e-12!76;CL:0000839!3.16e-11!70;CL:0000557!6.59e-11!71;CL:0000012!1.09e-08!682;CL:0002087!1.12e-08!119;CL:0000763!1.16e-08!112;CL:0000049!1.16e-08!112;CL:0000548!1.95e-08!679;CL:0000004!1.95e-08!679;CL:0000255!1.95e-08!679;CL:0000055!2.73e-08!180;CL:0002551!9.81e-08!6;CL:0000738!1.40e-07!140;CL:0000003!4.28e-07!722;CL:0002031!8.16e-07!124|ontology_enrichment_celltype_v019=CL:0000860;2.62e-28;33!CL:0002057;2.62e-28;33!CL:0002551;9.43e-20;6!CL:0000473;2.87e-19;39!CL:0000234;2.87e-19;39!CL:0000576;4.92e-17;48!CL:0000766;7.04e-10;69!CL:0002561;1.92e-08;2!CL:0000680;2.73e-08;7!CL:0002087;2.36e-07;104|ontology_enrichment_celltype_v019_2=CL:0000860,9.93e-33,42;CL:0002057,9.93e-33,42;CL:0000473,6.20e-28,48;CL:0000234,6.20e-28,48;CL:0002194,3.10e-21,59;CL:0000576,3.10e-21,59;CL:0000040,3.10e-21,59;CL:0000559,3.10e-21,59;CL:0002009,2.26e-20,61;CL:0002551,3.78e-20,6;CL:0000839,1.92e-18,66;CL:0000557,4.31e-18,67;CL:0000766,1.75e-16,72;CL:0002087,6.05e-13,115;CL:0002031,3.74e-12,120;CL:0002320,1.93e-11,361;CL:0000034,8.21e-11,441;CL:0000048,8.45e-11,427;CL:0000723,1.72e-10,433;CL:0000763,1.98e-10,108;CL:0000049,1.98e-10,108;CL:0000134,2.37e-10,354;CL:0000738,5.03e-10,136;CL:0000219,1.54e-08,386;CL:0002561,1.85e-08,2;CL:0002032,2.09e-08,161;CL:0000837,2.09e-08,161;CL:0000037,8.24e-08,168;CL:0000988,4.06e-07,177|ontology_enrichment_development_v019=CL:0002057;9.55e-23;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.78e-17!375;UBERON:0002204!9.62e-16!167;UBERON:0004765!4.86e-13!101;UBERON:0001434!4.86e-13!101;UBERON:0001474!3.38e-12!86;UBERON:0002390!6.67e-12!102;UBERON:0003061!6.67e-12!102;UBERON:0002371!1.06e-11!80;UBERON:0002193!1.49e-09!112;UBERON:0002405!1.27e-07!115|ontology_enrichment_uberon_v019=UBERON:0002067;5.82e-13;9!UBERON:0005933;1.92e-08;2!UBERON:0005942;1.92e-08;2!UBERON:0005932;1.92e-08;2!UBERON:0001134;3.86e-07;16!UBERON:0002036;3.86e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.47e-19,76;UBERON:0004765,3.47e-18,90;UBERON:0001434,3.32e-17,100;UBERON:0001474,4.06e-17,82;UBERON:0002204,1.02e-15,167;UBERON:0002405,1.99e-14,93;UBERON:0002390,2.09e-13,98;UBERON:0003061,2.09e-13,98;UBERON:0002067,3.22e-13,9;UBERON:0004016,3.22e-13,9;UBERON:0010083,3.22e-13,9;UBERON:0002193,1.19e-11,108;UBERON:0002384,7.68e-11,371;UBERON:0005933,1.85e-08,2;UBERON:0005942,1.85e-08,2;UBERON:0005932,1.85e-08,2;UBERON:0000926,2.86e-08,315;UBERON:0004120,2.86e-08,315;UBERON:0006603,2.86e-08,315|phase1_expression=1.45342703416445,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,2.52687949370732,0,0,0,0,0,0.37129905888014,1.65698687863958,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0,4.43196326825502,3.81034450193269,2.17010870715852,0,0,0,0,0,0,0.697287110717054,0.822335776043652,0.929119112685311,2.3015391385772,2.0492856522328,2.60130452877444,60.6752398096449,18.719055823931,20.3139729891513,0.188242339542605,0,0,34.587479837912,25.6743221660875,28.1308335351578,0.329851300186716,0.398927315243264,0.426224750532694,5.22376629531451,1.70215567407342,2.4912889959823,1.50749199154046,4.17186334736161,2.38907729175628,6.65939452896706,4.78760926783834,6.32924774881769,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0.795285947051099,0,0.0945348171640679,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,2.49728061464256,2.85235910772225,1.94283284717341,2.70099346880659,1.94247533241758,2.24721290723598,1.02077085627447,0.122834317311768,3.30642499762449,2.37600571456411,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0,0.427114777637135,0.847727604638247,0,0.206105058476878,0.257640540045629,0,0,0.292311015483596,0,0.368199594569197,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,4.64367928031979,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr15:51520746..51520771,- | |||
|id=chr15:51520746..51520771,- | |||
|ontology_enrichment_celltype=CL:0000048!3.71e-21!430;CL:0000723!3.19e-20!436;CL:0000034!3.40e-20!444;CL:0002320!9.63e-18!365;CL:0002057!5.20e-17!42;CL:0000134!6.17e-17!358;CL:0000860!4.46e-16!45;CL:0000219!2.31e-15!390;CL:0002194!8.73e-14!63;CL:0000576!8.73e-14!63;CL:0000040!8.73e-14!63;CL:0000559!8.73e-14!63;CL:0002371!1.97e-13!591;CL:0002009!5.44e-13!65;CL:0000144!6.31e-12!625;CL:0000766!8.89e-12!76;CL:0000839!3.16e-11!70;CL:0000557!6.59e-11!71;CL:0000012!1.09e-08!682;CL:0002087!1.12e-08!119;CL:0000763!1.16e-08!112;CL:0000049!1.16e-08!112;CL:0000548!1.95e-08!679;CL:0000004!1.95e-08!679;CL:0000255!1.95e-08!679;CL:0000055!2.73e-08!180;CL:0002551!9.81e-08!6;CL:0000738!1.40e-07!140;CL:0000003!4.28e-07!722;CL:0002031!8.16e-07!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.62e-28;33!CL:0002057;2.62e-28;33!CL:0002551;9.43e-20;6!CL:0000473;2.87e-19;39!CL:0000234;2.87e-19;39!CL:0000576;4.92e-17;48!CL:0000766;7.04e-10;69!CL:0002561;1.92e-08;2!CL:0000680;2.73e-08;7!CL:0002087;2.36e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.93e-33,42;CL:0002057,9.93e-33,42;CL:0000473,6.20e-28,48;CL:0000234,6.20e-28,48;CL:0002194,3.10e-21,59;CL:0000576,3.10e-21,59;CL:0000040,3.10e-21,59;CL:0000559,3.10e-21,59;CL:0002009,2.26e-20,61;CL:0002551,3.78e-20,6;CL:0000839,1.92e-18,66;CL:0000557,4.31e-18,67;CL:0000766,1.75e-16,72;CL:0002087,6.05e-13,115;CL:0002031,3.74e-12,120;CL:0002320,1.93e-11,361;CL:0000034,8.21e-11,441;CL:0000048,8.45e-11,427;CL:0000723,1.72e-10,433;CL:0000763,1.98e-10,108;CL:0000049,1.98e-10,108;CL:0000134,2.37e-10,354;CL:0000738,5.03e-10,136;CL:0000219,1.54e-08,386;CL:0002561,1.85e-08,2;CL:0002032,2.09e-08,161;CL:0000837,2.09e-08,161;CL:0000037,8.24e-08,168;CL:0000988,4.06e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;9.55e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.78e-17!375;UBERON:0002204!9.62e-16!167;UBERON:0004765!4.86e-13!101;UBERON:0001434!4.86e-13!101;UBERON:0001474!3.38e-12!86;UBERON:0002390!6.67e-12!102;UBERON:0003061!6.67e-12!102;UBERON:0002371!1.06e-11!80;UBERON:0002193!1.49e-09!112;UBERON:0002405!1.27e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002067;5.82e-13;9!UBERON:0005933;1.92e-08;2!UBERON:0005942;1.92e-08;2!UBERON:0005932;1.92e-08;2!UBERON:0001134;3.86e-07;16!UBERON:0002036;3.86e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.47e-19,76;UBERON:0004765,3.47e-18,90;UBERON:0001434,3.32e-17,100;UBERON:0001474,4.06e-17,82;UBERON:0002204,1.02e-15,167;UBERON:0002405,1.99e-14,93;UBERON:0002390,2.09e-13,98;UBERON:0003061,2.09e-13,98;UBERON:0002067,3.22e-13,9;UBERON:0004016,3.22e-13,9;UBERON:0010083,3.22e-13,9;UBERON:0002193,1.19e-11,108;UBERON:0002384,7.68e-11,371;UBERON:0005933,1.85e-08,2;UBERON:0005942,1.85e-08,2;UBERON:0005932,1.85e-08,2;UBERON:0000926,2.86e-08,315;UBERON:0004120,2.86e-08,315;UBERON:0006603,2.86e-08,315 | |||
|phase1_expression=1.45342703416445,0.642301571672949,0.563817616383885,0,0.446961094427288,0,0,2.52687949370732,0,0,0,0,0,0.37129905888014,1.65698687863958,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.136874425072884,0,0.229240217243854,0.164201178899891,0.0787107813136792,0,0.383829398097213,0.464448369948228,0,0,0,0,0,0,4.43196326825502,3.81034450193269,2.17010870715852,0,0,0,0,0,0,0.697287110717054,0.822335776043652,0.929119112685311,2.3015391385772,2.0492856522328,2.60130452877444,60.6752398096449,18.719055823931,20.3139729891513,0.188242339542605,0,0,34.587479837912,25.6743221660875,28.1308335351578,0.329851300186716,0.398927315243264,0.426224750532694,5.22376629531451,1.70215567407342,2.4912889959823,1.50749199154046,4.17186334736161,2.38907729175628,6.65939452896706,4.78760926783834,6.32924774881769,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.434539556882471,0.795285947051099,0,0.0945348171640679,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,2.49728061464256,2.85235910772225,1.94283284717341,2.70099346880659,1.94247533241758,2.24721290723598,1.02077085627447,0.122834317311768,3.30642499762449,2.37600571456411,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0.150238058906597,0,0,0.427114777637135,0.847727604638247,0,0.206105058476878,0.257640540045629,0,0,0.292311015483596,0,0.368199594569197,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,4.64367928031979,4.33127689001751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0.234004265139238,0.891786973732369,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0.845302752556,0,0,0,0,0,0,0,0,3.58309802723109,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,2.05476322550383,1.25342674267927,0,0.394061520403854,0,0.256686072559497,0.508189248444927,0,0,0,0,0,0,0.414415513436035,1.8403723757871,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0,0.0868836144680828,0,0,0,0.215714200818617,0.533637789017222,0,0,0,0,0.306923946576125,0,0,0,0.321707842287215,0,0,0.177561725313127,0.657017248110473,0,0.464841513839837,0,0,0,0.459257792658427,0.364182336013434,0.786746489756545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.660075999364704,0,0.650060246036521,0,0.096670718292122,0.616194468458578,1.5350367472613,1.10269257987624,10.6346042419591,4.0604674295984,0.340906509664404,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0.202910376962704,0,0,0.286822704408103,0,0,0,0,1.64647446479951,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,2.50634477090067,0,0,0,0,0.687010689511529,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0,0,1.11443384277478,0,0,0,0,0,0,0,3.13127361030843,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0.797594390929008,0,0,0,0,0,0,0,0,0,0,0.392125068635479,0.167821586975843,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0.713987523454252,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0.196854963029498,0.254019996197353,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.947015026375446,2.26411111577318,7.11848977277229,1.83072054717539,0.453692771289717,0.15543720058278,0.591420599958536,0,3.59842489730884,0,0,0,0,0,0,0,0.363697318405119,0,0.464033759878494,0,0,0.686791410365586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,1.72041036127604,0,3.79976052124367,0,0.344429959321631,0,1.65695355226657,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.80272158934072,0.171488009437418,0.0679697329768317,0,0.236387681767936,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,1.45051314914126,0.17071847709395,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0,0,0,0.169927114687817,0.187967835959707,0.128915775947154,0.0999411559249289,0,0,0.1604827333783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| |||
|short_description=p@chr15:51520746..51520771,- | |||
}} |
Revision as of 07:21, 11 September 2013
Short description: | p@chr15:51520746..51520771, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:51520746..51520771, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.93e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.93e-33 | 42 |
defensive cell | 6.20e-28 | 48 |
phagocyte | 6.20e-28 | 48 |
monopoietic cell | 3.10e-21 | 59 |
monocyte | 3.10e-21 | 59 |
monoblast | 3.10e-21 | 59 |
promonocyte | 3.10e-21 | 59 |
macrophage dendritic cell progenitor | 2.26e-20 | 61 |
fibroblast of dermis | 3.78e-20 | 6 |
myeloid lineage restricted progenitor cell | 1.92e-18 | 66 |
granulocyte monocyte progenitor cell | 4.31e-18 | 67 |
myeloid leukocyte | 1.75e-16 | 72 |
nongranular leukocyte | 6.05e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 3.74e-12 | 120 |
connective tissue cell | 1.93e-11 | 361 |
stem cell | 8.21e-11 | 441 |
multi fate stem cell | 8.45e-11 | 427 |
somatic stem cell | 1.72e-10 | 433 |
myeloid cell | 1.98e-10 | 108 |
common myeloid progenitor | 1.98e-10 | 108 |
mesenchymal cell | 2.37e-10 | 354 |
leukocyte | 5.03e-10 | 136 |
motile cell | 1.54e-08 | 386 |
outer root sheath cell | 1.85e-08 | 2 |
hematopoietic oligopotent progenitor cell | 2.09e-08 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-08 | 161 |
hematopoietic stem cell | 8.24e-08 | 168 |
hematopoietic cell | 4.06e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.47e-19 | 76 |
skeletal element | 3.47e-18 | 90 |
skeletal system | 3.32e-17 | 100 |
bone element | 4.06e-17 | 82 |
musculoskeletal system | 1.02e-15 | 167 |
immune system | 1.99e-14 | 93 |
hematopoietic system | 2.09e-13 | 98 |
blood island | 2.09e-13 | 98 |
dermis | 3.22e-13 | 9 |
dermatome | 3.22e-13 | 9 |
future dermis | 3.22e-13 | 9 |
hemolymphoid system | 1.19e-11 | 108 |
connective tissue | 7.68e-11 | 371 |
hair root sheath | 1.85e-08 | 2 |
hair outer root sheath | 1.85e-08 | 2 |
bulb of hair follicle | 1.85e-08 | 2 |
mesoderm | 2.86e-08 | 315 |
mesoderm-derived structure | 2.86e-08 | 315 |
presumptive mesoderm | 2.86e-08 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.