FFCP PHASE1:Hg19::chr15:71146480..71146531,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55323 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24012 | |||
|TSSclassifier=S | |||
|UniProt=Q9BRS8,Q5XKE4 | |||
|association_with_transcript=0bp_to_ENST00000299213,ENST00000344870,NM_018357,NM_197958,uc002ass.2,uc002ast.2_5end | |||
|coexpression_cluster_id=C3509 | |||
|description=CAGE_peak_1_at_LARP6_5end | |||
|id=chr15:71146480..71146531,- | |||
|ontology_enrichment_celltype=CL:0000055!4.72e-29!180;CL:0000183!6.69e-18!59;CL:0000680!3.54e-17!57;CL:0000056!3.54e-17!57;CL:0000355!3.54e-17!57;CL:0000187!7.97e-17!54;CL:0000192!2.23e-16!42;CL:0000514!2.23e-16!42;CL:0000057!3.17e-14!75;CL:0000222!3.84e-14!119;CL:0000359!1.08e-13!32;CL:0000393!1.19e-13!60;CL:0000211!1.19e-13!60;CL:0000220!1.97e-11!246;CL:0002321!4.62e-11!248 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.89e-13;32!CL:0000192;3.05e-12;43!CL:0000187;2.50e-09;55!CL:0000393;2.37e-07;61!CL:0000211;2.37e-07;61!CL:0000057;8.74e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.84e-17,58;CL:0000056,1.84e-17,58;CL:0000355,1.84e-17,58;CL:0000187,4.17e-17,55;CL:0000192,1.22e-16,43;CL:0000514,1.22e-16,43;CL:0000057,1.19e-14,76;CL:0000222,1.88e-14,121;CL:0000393,6.38e-14,61;CL:0000211,6.38e-14,61;CL:0000359,9.69e-14,32;CL:0002321,2.26e-11,250 | |||
|ontology_enrichment_development_v019=CL:0000514;3.05e-12;43!CL:0000355;2.38e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p1@LARP6 | |||
}} |
Revision as of 08:05, 11 September 2013
Short description: | p1@LARP6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LARP6_5end |
Coexpression cluster: | C3509_Fibroblast_Keratocytes_Myoblast_tridermal_Smooth_optic_embryonic |
Association with transcript: | 0bp_to_ENST00000299213, ENST00000344870, NM_018357, NM_197958, uc002ass.2, uc002ast.2_5end |
EntrezGene: | LARP6 |
HGNC: | 24012 |
UniProt: | Q9BRS8Q5XKE4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.84e-17 | 58 |
myoblast | 1.84e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.84e-17 | 58 |
muscle cell | 4.17e-17 | 55 |
smooth muscle cell | 1.22e-16 | 43 |
smooth muscle myoblast | 1.22e-16 | 43 |
fibroblast | 1.19e-14 | 76 |
mesodermal cell | 1.88e-14 | 121 |
electrically responsive cell | 6.38e-14 | 61 |
electrically active cell | 6.38e-14 | 61 |
vascular associated smooth muscle cell | 9.69e-14 | 32 |
embryonic cell | 2.26e-11 | 250 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.