FFCP PHASE1:Hg19::chr15:74218799..74218816,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:74218799..74218816,-|id=chr15:74218799..74218816,-|ontology_enrichment_celltype=CL:0000055!4.75e-28!180;CL:0000057!6.93e-18!75;CL:0000680!3.25e-08!57;CL:0000056!3.25e-08!57;CL:0000355!3.25e-08!57;CL:0000095!6.04e-08!17;CL:0000123!6.04e-08!17;CL:0000183!1.15e-07!59;CL:0000243!9.78e-07!15;CL:0000125!9.78e-07!15;CL:0000030!9.78e-07!15;CL:0000339!9.78e-07!15|ontology_enrichment_celltype_v019=CL:0000197;8.52e-14;6!CL:0000098;8.52e-14;6!CL:0002167;8.52e-14;6!CL:0002598;1.52e-10;2!CL:0002559;1.98e-09;5!CL:0000153;7.78e-09;9!CL:0000447;7.78e-09;9!CL:0000138;6.68e-08;6!CL:0000346;1.34e-07;3!CL:1000428;1.34e-07;3!CL:0000499;1.52e-07;28!CL:0000135;2.64e-07;3!CL:0000515;2.64e-07;3!CL:0002590;2.64e-07;3!CL:0000388;2.64e-07;3|ontology_enrichment_celltype_v019_2=CL:0000197,8.49e-14,6;CL:0000098,8.49e-14,6;CL:0002167,8.49e-14,6;CL:0002598,4.17e-10,2;CL:0002559,2.24e-09,5;CL:0000153,5.80e-09,9;CL:0000447,5.80e-09,9;CL:0000058,6.19e-08,6;CL:0000138,6.19e-08,6;CL:0000499,1.04e-07,28;CL:0002590,1.39e-07,3;CL:0000135,1.59e-07,3;CL:0000346,1.59e-07,3;CL:1000428,1.59e-07,3;CL:0000388,1.59e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;2.64e-07;3!DOID:127;2.64e-07;3|ontology_enrichment_disease_v019_2=DOID:0060084,2.74e-07,3;DOID:127,2.74e-07,3|ontology_enrichment_uberon=UBERON:0000914!5.79e-13!83;UBERON:0002329!5.79e-13!83;UBERON:0003077!5.79e-13!83;UBERON:0003059!5.79e-13!83;UBERON:0007282!5.79e-13!83;UBERON:0009618!5.79e-13!83;UBERON:0007285!5.79e-13!83;UBERON:0004290!2.28e-09!70;UBERON:0000486!4.95e-08!82;UBERON:0002385!1.68e-07!63;UBERON:0001015!1.68e-07!63;UBERON:0000383!1.68e-07!63;UBERON:0003102!3.09e-07!95;UBERON:0001134!3.52e-07!61;UBERON:0002036!3.52e-07!61;UBERON:0003082!3.52e-07!61|ontology_enrichment_uberon_v019=UBERON:0002073;1.98e-09;5!UBERON:0005284;3.61e-09;5!UBERON:0000412;1.34e-07;3!UBERON:0001992;1.34e-07;3!UBERON:0007846;2.64e-07;3!UBERON:0000043;2.64e-07;3!UBERON:0007845;2.64e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005284,1.46e-09,5;UBERON:0002073,2.24e-09,5;UBERON:0005086,2.24e-09,5;UBERON:0007846,1.59e-07,3;UBERON:0000043,1.59e-07,3;UBERON:0007845,1.59e-07,3;UBERON:0000412,1.59e-07,3;UBERON:0001992,1.59e-07,3|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.866364470720326,0.662794751455832,0.672325146451775,0.602694528023977,0,0,0.123121058076788,0.612002073732759,0.313454721478088,0.286235987131057,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,1.0843174571537,2.00535164254356,1.88300474649071,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.132409180813219,0,0.354668382198357,1.68203280042692,0,0.49333509683432,0.933633106199299,0.269421344139376,0,0.756787138224657,1.72852777344,0,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0.140450806702248,0.816616685019573,0.491337269247072,0.516628905878827,0,0,0.910161361938026,0,0.168336113954066,0.250237039743928,1.10825646193673,0.438977620880838,0.30648779579902,0.300476117813194,0.226864366320042,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0,0.257640540045629,0.744467425326359,0.337552664482532,0.584622030967192,0,0.0920498986422993,0,0,0.604512589365842,0.847802961552438,0,0,0,0,0.132529768321485,0,0,0,0,3.12899064659632,1.28648187638577,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,0.231860809950154,0.234817388471643,0.144366447761074,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0.43596006883328,0,0,0,0,0,0,0.514414748524284,0,1.3321108950805,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,1.91699884393266,0,0,0.579125226670317,1.02738161275192,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.271265023699736,2.28767947683888,1.42743191037729,3.31175071571263,3.27995961979597,0.902838299183157,0,0,0.664225598535437,0.368738337083406,0.173767228936166,5.48243240895674,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0,1.53512174720011,0.321707842287215,1.48418066444991,0,0,0.328508624055237,0,0.232420756919918,0,0,0,0.574072240823034,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0,0,0,0.256450125116389,0.328014645699706,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0.307007349452259,0,0.107420244868274,0.580066775656914,0.170453254832202,0,0,0,0,0,1.39453664789186,0,0.6970372701606,0,1.06461206063404,0.869932992075073,0.55597265731176,0.143124886741991,1.488633477438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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:74218799..74218816,- | |||
|id=chr15:74218799..74218816,- | |||
|ontology_enrichment_celltype=CL:0000055!4.75e-28!180;CL:0000057!6.93e-18!75;CL:0000680!3.25e-08!57;CL:0000056!3.25e-08!57;CL:0000355!3.25e-08!57;CL:0000095!6.04e-08!17;CL:0000123!6.04e-08!17;CL:0000183!1.15e-07!59;CL:0000243!9.78e-07!15;CL:0000125!9.78e-07!15;CL:0000030!9.78e-07!15;CL:0000339!9.78e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000197;8.52e-14;6!CL:0000098;8.52e-14;6!CL:0002167;8.52e-14;6!CL:0002598;1.52e-10;2!CL:0002559;1.98e-09;5!CL:0000153;7.78e-09;9!CL:0000447;7.78e-09;9!CL:0000138;6.68e-08;6!CL:0000346;1.34e-07;3!CL:1000428;1.34e-07;3!CL:0000499;1.52e-07;28!CL:0000135;2.64e-07;3!CL:0000515;2.64e-07;3!CL:0002590;2.64e-07;3!CL:0000388;2.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,8.49e-14,6;CL:0000098,8.49e-14,6;CL:0002167,8.49e-14,6;CL:0002598,4.17e-10,2;CL:0002559,2.24e-09,5;CL:0000153,5.80e-09,9;CL:0000447,5.80e-09,9;CL:0000058,6.19e-08,6;CL:0000138,6.19e-08,6;CL:0000499,1.04e-07,28;CL:0002590,1.39e-07,3;CL:0000135,1.59e-07,3;CL:0000346,1.59e-07,3;CL:1000428,1.59e-07,3;CL:0000388,1.59e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.64e-07;3!DOID:127;2.64e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,2.74e-07,3;DOID:127,2.74e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000914!5.79e-13!83;UBERON:0002329!5.79e-13!83;UBERON:0003077!5.79e-13!83;UBERON:0003059!5.79e-13!83;UBERON:0007282!5.79e-13!83;UBERON:0009618!5.79e-13!83;UBERON:0007285!5.79e-13!83;UBERON:0004290!2.28e-09!70;UBERON:0000486!4.95e-08!82;UBERON:0002385!1.68e-07!63;UBERON:0001015!1.68e-07!63;UBERON:0000383!1.68e-07!63;UBERON:0003102!3.09e-07!95;UBERON:0001134!3.52e-07!61;UBERON:0002036!3.52e-07!61;UBERON:0003082!3.52e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.98e-09;5!UBERON:0005284;3.61e-09;5!UBERON:0000412;1.34e-07;3!UBERON:0001992;1.34e-07;3!UBERON:0007846;2.64e-07;3!UBERON:0000043;2.64e-07;3!UBERON:0007845;2.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,1.46e-09,5;UBERON:0002073,2.24e-09,5;UBERON:0005086,2.24e-09,5;UBERON:0007846,1.59e-07,3;UBERON:0000043,1.59e-07,3;UBERON:0007845,1.59e-07,3;UBERON:0000412,1.59e-07,3;UBERON:0001992,1.59e-07,3 | |||
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|short_description=p@chr15:74218799..74218816,- | |||
}} |
Revision as of 08:11, 11 September 2013
Short description: | p@chr15:74218799..74218816, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:74218799..74218816, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 8.49e-14 | 6 |
sensory epithelial cell | 8.49e-14 | 6 |
olfactory epithelial cell | 8.49e-14 | 6 |
bronchial smooth muscle cell | 4.17e-10 | 2 |
hair follicle cell | 2.24e-09 | 5 |
GAG secreting cell | 5.80e-09 | 9 |
carbohydrate secreting cell | 5.80e-09 | 9 |
chondroblast | 6.19e-08 | 6 |
chondrocyte | 6.19e-08 | 6 |
stromal cell | 1.04e-07 | 28 |
smooth muscle cell of the brain vasculature | 1.39e-07 | 3 |
fibrocyte | 1.59e-07 | 3 |
hair follicle dermal papilla cell | 1.59e-07 | 3 |
stem cell of epidermis | 1.59e-07 | 3 |
tendon cell | 1.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 1.46e-09 | 5 |
hair follicle | 2.24e-09 | 5 |
hair follicle placode | 2.24e-09 | 5 |
dense regular connective tissue | 1.59e-07 | 3 |
tendon | 1.59e-07 | 3 |
regular connective tissue | 1.59e-07 | 3 |
dermal papilla | 1.59e-07 | 3 |
papillary layer of dermis | 1.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 2.74e-07 | 3 |
leiomyoma | 2.74e-07 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.