FFCP PHASE1:Hg19::chr17:67057114..67057126,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10350|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=39|TSSclassifier=S|UniProt=Q8IUA7,F8W6V5|association_with_transcript=9bp_to_ENST00000340001,ENST00000370732,ENST00000453749,NM_080283,uc002jhu.2,uc002jhv.2_5end|description=CAGE_peak_2_at_ABCA9_5end|id=chr17:67057114..67057126,-|ontology_enrichment_celltype=CL:0002494!1.31e-08!16;CL:0000187!2.49e-07!54;CL:0000359!2.67e-07!32;CL:0000680!4.36e-07!57;CL:0000056!4.36e-07!57;CL:0000355!4.36e-07!57;CL:0000136!5.00e-07!15|ontology_enrichment_celltype_v019=CL:0002494;9.27e-15;16!CL:1000306;2.00e-08;4!CL:0002547;2.00e-08;4!CL:0000569;3.63e-08;4|ontology_enrichment_celltype_v019_2=CL:0002494,6.19e-15,16;CL:1000306,2.26e-08,4;CL:0002547,2.26e-08,4;CL:0000569,2.93e-08,4;CL:0000011,2.93e-08,4|ontology_enrichment_development_v019=CL:0000011;3.63e-08;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!4.12e-39!115;UBERON:0007100!8.22e-19!27;UBERON:0000948!4.28e-16!24;UBERON:0005498!4.28e-16!24;UBERON:0004140!4.28e-16!24;UBERON:0009881!4.28e-16!24;UBERON:0004141!4.28e-16!24;UBERON:0003084!4.28e-16!24;UBERON:0007005!4.28e-16!24;UBERON:0004139!4.28e-16!24;UBERON:0004291!4.28e-16!24;UBERON:0000477!9.76e-16!286;UBERON:0000025!8.71e-15!194;UBERON:0004872!1.18e-14!84;UBERON:0004111!1.35e-14!241;UBERON:0002616!1.30e-11!59;UBERON:0001049!2.31e-11!57;UBERON:0005068!2.31e-11!57;UBERON:0006241!2.31e-11!57;UBERON:0007135!2.31e-11!57;UBERON:0000119!3.77e-11!312;UBERON:0000483!8.23e-11!309;UBERON:0003103!1.53e-10!69;UBERON:0001009!1.81e-10!113;UBERON:0000481!3.72e-10!347;UBERON:0003075!3.91e-10!86;UBERON:0007284!3.91e-10!86;UBERON:0002385!3.18e-09!63;UBERON:0001015!3.18e-09!63;UBERON:0000383!3.18e-09!63;UBERON:0002346!4.06e-09!90;UBERON:0004535!5.11e-09!110;UBERON:0000468!5.15e-09!659;UBERON:0001637!8.97e-09!42;UBERON:0003509!8.97e-09!42;UBERON:0004572!8.97e-09!42;UBERON:0000955!1.01e-08!69;UBERON:0006238!1.01e-08!69;UBERON:0001017!1.21e-08!82;UBERON:0000475!2.36e-08!365;UBERON:0001134!2.68e-08!61;UBERON:0002036!2.68e-08!61;UBERON:0003082!2.68e-08!61;UBERON:0005743!2.73e-08!86;UBERON:0000479!4.71e-08!787;UBERON:0003080!4.97e-08!42;UBERON:0003914!7.60e-08!118;UBERON:0000467!9.85e-08!625;UBERON:0000480!1.21e-07!626;UBERON:0002780!2.17e-07!41;UBERON:0001890!2.17e-07!41;UBERON:0006240!2.17e-07!41;UBERON:0004573!2.33e-07!33;UBERON:0004571!2.33e-07!33;UBERON:0001981!2.85e-07!60;UBERON:0007500!2.85e-07!60;UBERON:0004537!2.85e-07!60;UBERON:0006965!2.85e-07!60;UBERON:0000153!3.27e-07!129;UBERON:0007811!3.27e-07!129|ontology_enrichment_uberon_v019=UBERON:0007100;2.27e-29;25!UBERON:0000948;7.95e-25;22!UBERON:0004797;2.00e-08;4!UBERON:0000415;2.00e-08;4!UBERON:0007240;2.00e-08;4!UBERON:0005742;2.00e-08;4!UBERON:0005734;2.00e-08;4!UBERON:0004664;2.00e-08;4!UBERON:0004663;2.00e-08;4!UBERON:0004151;2.88e-07;3!UBERON:0005904;4.93e-07;4!UBERON:0003978;7.48e-07;3!UBERON:0000946;7.48e-07;3!UBERON:0004573;8.82e-07;33!UBERON:0004571;8.82e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.04e-32,27;UBERON:0000948,5.40e-28,24;UBERON:0005498,5.40e-28,24;UBERON:0004140,5.40e-28,24;UBERON:0009881,5.40e-28,24;UBERON:0004141,5.40e-28,24;UBERON:0003084,5.40e-28,24;UBERON:0007005,5.40e-28,24;UBERON:0004139,5.40e-28,24;UBERON:0004291,5.40e-28,24;UBERON:0003103,1.73e-19,68;UBERON:0007023,2.48e-18,114;UBERON:0004872,5.96e-18,83;UBERON:0001009,1.66e-14,112;UBERON:0004797,1.20e-13,7;UBERON:0004535,3.41e-12,109;UBERON:0003914,1.28e-10,117;UBERON:0004111,9.59e-09,240;UBERON:0000415,2.26e-08,4;UBERON:0007240,2.26e-08,4;UBERON:0005742,2.26e-08,4;UBERON:0005734,2.26e-08,4;UBERON:0004664,2.26e-08,4;UBERON:0004663,2.26e-08,4;UBERON:0000025,9.61e-08,192;UBERON:0010314,1.36e-07,132;UBERON:0004573,2.29e-07,33;UBERON:0004571,2.29e-07,33;UBERON:0004151,2.78e-07,3;UBERON:0007500,3.71e-07,59;UBERON:0001981,3.71e-07,59;UBERON:0004537,3.71e-07,59;UBERON:0006965,3.71e-07,59;UBERON:0001637,5.73e-07,42;UBERON:0003509,5.73e-07,42;UBERON:0004572,5.73e-07,42;UBERON:0003978,6.20e-07,3;UBERON:0009751,6.20e-07,3;UBERON:0000946,6.20e-07,3;UBERON:0002523,6.20e-07,3;UBERON:0005983,6.20e-07,3;UBERON:0002165,6.20e-07,3;UBERON:0002062,6.20e-07,3;UBERON:0007280,6.20e-07,3;UBERON:0005904,7.27e-07,4|phase1_expression=3.27021082687002,0.642301571672949,7.61153782118244,0,0,1.74467704820074,0,3.15859936713415,0.261185628199839,0,0,0,0,0,0,0.672325146451775,3.01347264011988,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,3.35350429851818,1.79007586580942,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,2.15271869829786,16.0215108783995,8.03142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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10350 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=39 | |||
|TSSclassifier=S | |||
|UniProt=Q8IUA7,F8W6V5 | |||
|association_with_transcript=9bp_to_ENST00000340001,ENST00000370732,ENST00000453749,NM_080283,uc002jhu.2,uc002jhv.2_5end | |||
|description=CAGE_peak_2_at_ABCA9_5end | |||
|id=chr17:67057114..67057126,- | |||
|ontology_enrichment_celltype=CL:0002494!1.31e-08!16;CL:0000187!2.49e-07!54;CL:0000359!2.67e-07!32;CL:0000680!4.36e-07!57;CL:0000056!4.36e-07!57;CL:0000355!4.36e-07!57;CL:0000136!5.00e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002494;9.27e-15;16!CL:1000306;2.00e-08;4!CL:0002547;2.00e-08;4!CL:0000569;3.63e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,6.19e-15,16;CL:1000306,2.26e-08,4;CL:0002547,2.26e-08,4;CL:0000569,2.93e-08,4;CL:0000011,2.93e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000011;3.63e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.12e-39!115;UBERON:0007100!8.22e-19!27;UBERON:0000948!4.28e-16!24;UBERON:0005498!4.28e-16!24;UBERON:0004140!4.28e-16!24;UBERON:0009881!4.28e-16!24;UBERON:0004141!4.28e-16!24;UBERON:0003084!4.28e-16!24;UBERON:0007005!4.28e-16!24;UBERON:0004139!4.28e-16!24;UBERON:0004291!4.28e-16!24;UBERON:0000477!9.76e-16!286;UBERON:0000025!8.71e-15!194;UBERON:0004872!1.18e-14!84;UBERON:0004111!1.35e-14!241;UBERON:0002616!1.30e-11!59;UBERON:0001049!2.31e-11!57;UBERON:0005068!2.31e-11!57;UBERON:0006241!2.31e-11!57;UBERON:0007135!2.31e-11!57;UBERON:0000119!3.77e-11!312;UBERON:0000483!8.23e-11!309;UBERON:0003103!1.53e-10!69;UBERON:0001009!1.81e-10!113;UBERON:0000481!3.72e-10!347;UBERON:0003075!3.91e-10!86;UBERON:0007284!3.91e-10!86;UBERON:0002385!3.18e-09!63;UBERON:0001015!3.18e-09!63;UBERON:0000383!3.18e-09!63;UBERON:0002346!4.06e-09!90;UBERON:0004535!5.11e-09!110;UBERON:0000468!5.15e-09!659;UBERON:0001637!8.97e-09!42;UBERON:0003509!8.97e-09!42;UBERON:0004572!8.97e-09!42;UBERON:0000955!1.01e-08!69;UBERON:0006238!1.01e-08!69;UBERON:0001017!1.21e-08!82;UBERON:0000475!2.36e-08!365;UBERON:0001134!2.68e-08!61;UBERON:0002036!2.68e-08!61;UBERON:0003082!2.68e-08!61;UBERON:0005743!2.73e-08!86;UBERON:0000479!4.71e-08!787;UBERON:0003080!4.97e-08!42;UBERON:0003914!7.60e-08!118;UBERON:0000467!9.85e-08!625;UBERON:0000480!1.21e-07!626;UBERON:0002780!2.17e-07!41;UBERON:0001890!2.17e-07!41;UBERON:0006240!2.17e-07!41;UBERON:0004573!2.33e-07!33;UBERON:0004571!2.33e-07!33;UBERON:0001981!2.85e-07!60;UBERON:0007500!2.85e-07!60;UBERON:0004537!2.85e-07!60;UBERON:0006965!2.85e-07!60;UBERON:0000153!3.27e-07!129;UBERON:0007811!3.27e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;2.27e-29;25!UBERON:0000948;7.95e-25;22!UBERON:0004797;2.00e-08;4!UBERON:0000415;2.00e-08;4!UBERON:0007240;2.00e-08;4!UBERON:0005742;2.00e-08;4!UBERON:0005734;2.00e-08;4!UBERON:0004664;2.00e-08;4!UBERON:0004663;2.00e-08;4!UBERON:0004151;2.88e-07;3!UBERON:0005904;4.93e-07;4!UBERON:0003978;7.48e-07;3!UBERON:0000946;7.48e-07;3!UBERON:0004573;8.82e-07;33!UBERON:0004571;8.82e-07;33 | |||
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|phase1_expression=3.27021082687002,0.642301571672949,7.61153782118244,0,0,1.74467704820074,0,3.15859936713415,0.261185628199839,0,0,0,0,0,0,0.672325146451775,3.01347264011988,0,0.975865597581014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447830948479849,0,0.515151135268373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,3.35350429851818,1.79007586580942,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.993943903390637,2.15271869829786,16.0215108783995,8.03142538096678,3.54668382198357,2.80338800071154,0,0,25.2080938673811,3.63718814588158,4.7403951902903,1.81628913173918,7.49028701823999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,2.7223723958405,0,0.213557388818567,0,0,0,0,0,0,0,0,0.552299391853796,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.1466765716419,0,0,0,1.06375246633948,0,0,0,0,0.428933980974443,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,2.72918588600655,0,1.12264037773229,13.71088897036,0.511707249066704,2.73451665944133,1.48418066444991,0,0.532685175939381,0.9033987161519,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95777922130672,0,0,0,0,3.21367859688319,1.06337790121334,0,0,0,0.644521469209642,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0,0,0,0,1.5740617341532,0,4.00443654228915,1.59691809095107,0,0.18532421910392,0.858749320451947,0.744316738719335,0.316379424718726,0,0,0.42793898803392,5.40945521474092,0,0.179872457583315,0,0,2.02182481573316,0,0,0,4.14312932373184,0,0,0,2.26016233240486,1.65409603063837,1.32687795048244,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0,0.35667105148125,0.709522128141196,0.211107635297664,3.29294892959902,0,0,0,0,0,1.97701981631236,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.453195238111,0,0,0,0,0,0,0,0,5.89936136621401,0,0,1.79323189425963,1.65770349318689,0,0,0,0,0,0,0,6.41182136640068,0,0,0,0.463840490809256,0,0,0,5.79999660347835,0,0,0,0,0,0,0,0.964771509003264,0,1.43753037910592,0.295547618953547,1.31631238292384,0,0,3.61666214967846,0,0,0,0,0,0.824378340616761,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,6.45740220874376,3.05515072466813,0,0,0,0.876214728748802,7.2231988256891,0,1.64209310294099,0,0,1.18375320854817,1.20990716048664,1.22429104652196,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,2.62090002363045,0,0,0,0,7.37116525311988,0,4.97157629717171,0,0,0.696418755514666,0,0,2.13452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.821432273351958,0,0,0,11.7298608534347,2.7499250881402,15.7932065406899,1.99679000498991,5.57993862577542,4.68660060627932,16.5271342317347,0,0,0,0,0,0.0984274815147488,0,0,0.817220436669454,0,0,0,0,0,0.364497339948148,0,0.157611414598396,0.577000469484979,0,0,0,7.86164859010704,11.2555634962123,0,0,0.864221491201268,0,0,0,0,0,0.58620893471233,0,0.258565912723101,0.26446520348538,0,0,0.640724475406168,0.943225830597996,0,0.496166021811951,0,0,0,2.1760712134779,2.506898940227,2.14441903734423,0.983617892129413,0,0,0.122026264901963,0.3755727921195,0.573409195690071,2.44043913381075,1.1177352529449,0,0,0,0,0,0,0,1.49254802886874,0.934853239388898,1.10961172300523,0.189403005275089,1.25783950876288,2.66943366478961,7.09404212030463,8.77139357826787,1.70980920641059,4.73136479966829,0.318593534327405,0,0.931577741257556,4.97647449409027,0,0,0,0.761610424337591,0,0.181848659202559,0,0.464033759878494,1.19428766609585,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,1.10463570151104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,1.41696576325585,0.798169295285756,0,0.252071696221718,0.138314504928436,0.807378228159255,0,0,0,0,0,0,0,0,6.6937192230839,0,0.781514011233092,0,0,0,0.337687923091973,0,0.206686796501184,0.253663240775627,0,2.19303106742873,0.496211178389294,0,0,1.60710550763486,1.3451348888753,0,0.455324382702595,0.0887023701626388,0,0,0.747667062745149,0.460409414939944,0,0,4.55259938532981,0.157115589916002,0,1.82631744101899,0,0,0.78624198594322,0,0,0,0.801711364730253,0,0,0,0.860454717640555,0,0,1.27016115057279,0,0,0,0,0,0,0.647428837187895,3.90118666053739,0,1.45713297917742,0,0,0,0,0,0,0.463044948647668,0.437119121007915,0,4.6578181133242,0,0.196308467114945,1.48523200163543,1.6906229103336,0,0,0.0644578879735772,0,0,0,0,0,1.83491713361816,2.43677291357467,0,0.271965960763659,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| |||
|short_description=p2@ABCA9 | |||
}} |
Revision as of 15:16, 11 September 2013
Short description: | p2@ABCA9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ABCA9_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000340001, ENST00000370732, ENST00000453749, NM_080283, uc002jhu.2, uc002jhv.2_5end |
EntrezGene: | ABCA9 |
HGNC: | 39 |
UniProt: | Q8IUA7F8W6V5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 6.19e-15 | 16 |
fibroblast of tunica adventitia of artery | 2.26e-08 | 4 |
fibroblast of the aortic adventitia | 2.26e-08 | 4 |
cardiac mesenchymal cell | 2.93e-08 | 4 |
migratory trunk neural crest cell | 2.93e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.