FFCP PHASE1:Hg19::chr19:1065951..1065970,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23526|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17102|TSSclassifier=S|UniProt=F6QP70|association_with_transcript=21bp_to_ENST00000539243,uc010xgd.1_5end|description=CAGE_peak_12_at_HMHA1_5end|id=chr19:1065951..1065970,+|ontology_enrichment_celltype=CL:0000066!1.31e-28!254;CL:0002076!6.23e-10!43;CL:0000077!2.06e-09!19;CL:0000223!4.70e-09!59;CL:0002541!3.18e-08!3;CL:0000076!1.23e-07!62;CL:0000039!2.07e-07!7;CL:0000586!2.07e-07!7|ontology_enrichment_celltype_v019=CL:0002541;9.36e-23;3!CL:0002563;5.23e-08;4|ontology_enrichment_celltype_v019_2=CL:0002541,1.26e-22,3;CL:0002563,3.18e-08,4|ontology_enrichment_development_v019=UBERON:0001041;3.97e-08;30|ontology_enrichment_disease=DOID:305!5.35e-35!106;DOID:0050687!2.02e-27!143;DOID:162!3.00e-18!235;DOID:14566!1.54e-17!239;DOID:1749!4.93e-11!14;DOID:299!2.24e-08!25|ontology_enrichment_disease_v019=DOID:3111;2.05e-08;1!DOID:3603;2.05e-08;1!DOID:1749;2.84e-08;14|ontology_enrichment_disease_v019_2=DOID:1749,2.63e-08,14;DOID:3111,4.07e-08,1;DOID:3603,4.07e-08,1;DOID:305,1.67e-07,106|ontology_enrichment_uberon=UBERON:0004119!3.23e-12!169;UBERON:0000925!3.23e-12!169;UBERON:0006595!3.23e-12!169;UBERON:0005911!3.94e-12!82;UBERON:0005631!9.33e-12!14;UBERON:0000158!9.33e-12!14;UBERON:0000065!1.29e-10!53;UBERON:0000077!1.31e-10!130;UBERON:0008947!1.96e-10!38;UBERON:0003258!1.96e-10!38;UBERON:0005153!8.99e-10!37;UBERON:0001007!8.45e-09!155;UBERON:0001555!8.45e-09!155;UBERON:0007026!8.45e-09!155;UBERON:0002048!1.80e-08!22;UBERON:0000117!1.80e-08!22;UBERON:0000171!1.80e-08!22;UBERON:0000170!1.80e-08!22;UBERON:0005597!1.80e-08!22;UBERON:0000118!1.80e-08!22;UBERON:0003124!2.74e-08!7;UBERON:0001004!2.76e-08!72;UBERON:0005157!2.83e-08!51;UBERON:0004921!2.98e-08!129;UBERON:0004185!2.98e-08!129;UBERON:0000476!3.18e-08!3;UBERON:0000920!3.18e-08!3;UBERON:0000344!3.71e-08!12;UBERON:0004923!4.34e-08!57|ontology_enrichment_uberon_v019=UBERON:0003124;9.36e-23;3!UBERON:0000920;9.36e-23;3!UBERON:0005631;6.77e-12;10!UBERON:0000158;6.77e-12;10!UBERON:0002048;2.30e-11;22!UBERON:0000117;2.30e-11;22!UBERON:0000171;2.30e-11;22!UBERON:0000170;2.30e-11;22!UBERON:0002171;8.76e-09;1!UBERON:0006518;8.76e-09;1!UBERON:0008949;8.76e-09;1!UBERON:0000101;8.76e-09;1!UBERON:0002167;8.76e-09;1!UBERON:0001052;3.17e-08;4!UBERON:0001242;5.23e-08;4!UBERON:0001262;5.23e-08;4!UBERON:0004786;5.23e-08;4!UBERON:0004808;5.23e-08;4!UBERON:0001277;5.23e-08;4!UBERON:0004907;9.69e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.26e-22,3;UBERON:0002048,1.76e-11,22;UBERON:0000117,1.76e-11,22;UBERON:0000171,1.76e-11,22;UBERON:0000170,1.76e-11,22;UBERON:0005597,1.76e-11,22;UBERON:0000118,1.76e-11,22;UBERON:0005153,1.83e-11,37;UBERON:0003124,5.21e-10,7;UBERON:0005157,8.69e-09,47;UBERON:0002171,8.78e-09,1;UBERON:0006518,8.78e-09,1;UBERON:0008949,8.78e-09,1;UBERON:0000101,8.78e-09,1;UBERON:0002167,8.78e-09,1;UBERON:0005911,1.00e-08,82;UBERON:0005631,1.46e-08,14;UBERON:0000158,1.46e-08,14;UBERON:0001052,2.38e-08,4;UBERON:0001242,3.18e-08,4;UBERON:0001262,3.18e-08,4;UBERON:0004786,3.18e-08,4;UBERON:0004808,3.18e-08,4;UBERON:0001277,3.18e-08,4;UBERON:0004921,7.52e-08,118;UBERON:0005178,3.07e-07,34;UBERON:0002224,3.07e-07,34;UBERON:0005181,5.12e-07,35;UBERON:0004907,7.71e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,10.4670175195864,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.22386941009813,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,1.525879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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23526 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17102 | |||
|TSSclassifier=S | |||
|UniProt=F6QP70 | |||
|association_with_transcript=21bp_to_ENST00000539243,uc010xgd.1_5end | |||
|description=CAGE_peak_12_at_HMHA1_5end | |||
|id=chr19:1065951..1065970,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.31e-28!254;CL:0002076!6.23e-10!43;CL:0000077!2.06e-09!19;CL:0000223!4.70e-09!59;CL:0002541!3.18e-08!3;CL:0000076!1.23e-07!62;CL:0000039!2.07e-07!7;CL:0000586!2.07e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002541;9.36e-23;3!CL:0002563;5.23e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.26e-22,3;CL:0002563,3.18e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.97e-08;30 | |||
|ontology_enrichment_disease=DOID:305!5.35e-35!106;DOID:0050687!2.02e-27!143;DOID:162!3.00e-18!235;DOID:14566!1.54e-17!239;DOID:1749!4.93e-11!14;DOID:299!2.24e-08!25 | |||
|ontology_enrichment_disease_v019=DOID:3111;2.05e-08;1!DOID:3603;2.05e-08;1!DOID:1749;2.84e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.63e-08,14;DOID:3111,4.07e-08,1;DOID:3603,4.07e-08,1;DOID:305,1.67e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.23e-12!169;UBERON:0000925!3.23e-12!169;UBERON:0006595!3.23e-12!169;UBERON:0005911!3.94e-12!82;UBERON:0005631!9.33e-12!14;UBERON:0000158!9.33e-12!14;UBERON:0000065!1.29e-10!53;UBERON:0000077!1.31e-10!130;UBERON:0008947!1.96e-10!38;UBERON:0003258!1.96e-10!38;UBERON:0005153!8.99e-10!37;UBERON:0001007!8.45e-09!155;UBERON:0001555!8.45e-09!155;UBERON:0007026!8.45e-09!155;UBERON:0002048!1.80e-08!22;UBERON:0000117!1.80e-08!22;UBERON:0000171!1.80e-08!22;UBERON:0000170!1.80e-08!22;UBERON:0005597!1.80e-08!22;UBERON:0000118!1.80e-08!22;UBERON:0003124!2.74e-08!7;UBERON:0001004!2.76e-08!72;UBERON:0005157!2.83e-08!51;UBERON:0004921!2.98e-08!129;UBERON:0004185!2.98e-08!129;UBERON:0000476!3.18e-08!3;UBERON:0000920!3.18e-08!3;UBERON:0000344!3.71e-08!12;UBERON:0004923!4.34e-08!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;9.36e-23;3!UBERON:0000920;9.36e-23;3!UBERON:0005631;6.77e-12;10!UBERON:0000158;6.77e-12;10!UBERON:0002048;2.30e-11;22!UBERON:0000117;2.30e-11;22!UBERON:0000171;2.30e-11;22!UBERON:0000170;2.30e-11;22!UBERON:0002171;8.76e-09;1!UBERON:0006518;8.76e-09;1!UBERON:0008949;8.76e-09;1!UBERON:0000101;8.76e-09;1!UBERON:0002167;8.76e-09;1!UBERON:0001052;3.17e-08;4!UBERON:0001242;5.23e-08;4!UBERON:0001262;5.23e-08;4!UBERON:0004786;5.23e-08;4!UBERON:0004808;5.23e-08;4!UBERON:0001277;5.23e-08;4!UBERON:0004907;9.69e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.26e-22,3;UBERON:0002048,1.76e-11,22;UBERON:0000117,1.76e-11,22;UBERON:0000171,1.76e-11,22;UBERON:0000170,1.76e-11,22;UBERON:0005597,1.76e-11,22;UBERON:0000118,1.76e-11,22;UBERON:0005153,1.83e-11,37;UBERON:0003124,5.21e-10,7;UBERON:0005157,8.69e-09,47;UBERON:0002171,8.78e-09,1;UBERON:0006518,8.78e-09,1;UBERON:0008949,8.78e-09,1;UBERON:0000101,8.78e-09,1;UBERON:0002167,8.78e-09,1;UBERON:0005911,1.00e-08,82;UBERON:0005631,1.46e-08,14;UBERON:0000158,1.46e-08,14;UBERON:0001052,2.38e-08,4;UBERON:0001242,3.18e-08,4;UBERON:0001262,3.18e-08,4;UBERON:0004786,3.18e-08,4;UBERON:0004808,3.18e-08,4;UBERON:0001277,3.18e-08,4;UBERON:0004921,7.52e-08,118;UBERON:0005178,3.07e-07,34;UBERON:0002224,3.07e-07,34;UBERON:0005181,5.12e-07,35;UBERON:0004907,7.71e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.45733936501509,10.4670175195864,0.436882744260345,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.220587945464788,0,0.237270619111097,0.134831308160164,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0877350463246,0,0.184161977871793,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0.656029291399411,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,1.22386941009813,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,0.307160702099232,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.508507300585533,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0.23056390438806,1.52587995496613,0.217294743844016,8.29403015302991,1.19076871422421,3.19820865611181,0,0,0,0,0,0,0,0,0.210998064528027,1.30586246527318,1.69623685720729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,1.30588809870604,0,0,0.387025325156341,0.511625219603299,0.0821154570532092,0,0,0,0,0,0,0.977756913674015,0.480952921509202,0,1.39866726707491,0,0,0,0.576219191952599,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,1.16495949527454,0.236349546921671,0,0.202210631562555,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0.528001682597033,0,1.34340638123612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99004755189545,0.157204305099666,2.48543433208317,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34833881285112,0.857766365499703,0.260994291965212,0.226705925512272,0,1.22368352253234,0,0.617602894321944,0.219284049578707,0,1.73622634443823,0.168942440653073,0,0.345430341731199,0,0,0,0,0,0,0,1.05656061679314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0.366857197043358,0.346576998451015,0,0,0,0,0,0,0,0.49131575253029,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,4.60955979447476,0.111231401892069,0,0,3.08299379645168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0,0,0.559277158988962,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36410323371586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,0,0.36757959813938,0,0,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p12@HMHA1 | |||
}} |
Revision as of 18:34, 11 September 2013
Short description: | p12@HMHA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_HMHA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000539243, uc010xgd.1_5end |
EntrezGene: | HMHA1 |
HGNC: | 17102 |
UniProt: | F6QP70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.26e-22 | 3 |
intestinal epithelial cell | 3.18e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.26e-22 | 3 |
lung | 1.76e-11 | 22 |
respiratory tube | 1.76e-11 | 22 |
respiration organ | 1.76e-11 | 22 |
pair of lungs | 1.76e-11 | 22 |
lung primordium | 1.76e-11 | 22 |
lung bud | 1.76e-11 | 22 |
epithelial bud | 1.83e-11 | 37 |
chorion | 5.21e-10 | 7 |
epithelial fold | 8.69e-09 | 47 |
lower lobe of right lung | 8.78e-09 | 1 |
right lung lobe | 8.78e-09 | 1 |
lower lobe of lung | 8.78e-09 | 1 |
lobe of lung | 8.78e-09 | 1 |
right lung | 8.78e-09 | 1 |
endo-epithelium | 1.00e-08 | 82 |
extraembryonic membrane | 1.46e-08 | 14 |
membranous layer | 1.46e-08 | 14 |
rectum | 2.38e-08 | 4 |
intestinal mucosa | 3.18e-08 | 4 |
wall of intestine | 3.18e-08 | 4 |
gastrointestinal system mucosa | 3.18e-08 | 4 |
gastrointestinal system epithelium | 3.18e-08 | 4 |
intestinal epithelium | 3.18e-08 | 4 |
subdivision of digestive tract | 7.52e-08 | 118 |
thoracic cavity element | 3.07e-07 | 34 |
thoracic cavity | 3.07e-07 | 34 |
thoracic segment organ | 5.12e-07 | 35 |
lower digestive tract | 7.71e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.63e-08 | 14 |
cystadenocarcinoma | 4.07e-08 | 1 |
mucinous cystadenocarcinoma | 4.07e-08 | 1 |
carcinoma | 1.67e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.