FFCP PHASE1:Hg19::chr2:62257232..62257274,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:62257232..62257274,+|id=chr2:62257232..62257274,+|ontology_enrichment_celltype=CL:0000349!8.05e-17!3;CL:0002577!8.05e-17!3;CL:0000244!2.46e-12!4;CL:0000731!2.46e-12!4;CL:0002536!5.75e-12!2;CL:0000317!6.76e-12!2;CL:1000448!6.76e-12!2;CL:0002308!6.76e-12!2;CL:0002140!6.76e-12!2;CL:0002537!1.25e-10!5;CL:0000622!3.64e-10!5;CL:0000154!1.52e-08!6;CL:0002541!8.19e-08!3;CL:0002166!1.56e-07!3;CL:0000039!2.64e-07!7;CL:0000586!2.64e-07!7|ontology_enrichment_celltype_v019=CL:0000349;5.81e-46;19!CL:0002536;1.55e-36;2!CL:0000317;2.45e-36;2!CL:1000448;2.45e-36;2!CL:0002308;2.45e-36;2!CL:0002140;2.45e-36;2!CL:0002537;2.11e-33;5!CL:0002577;8.42e-25;3!CL:0000622;3.35e-15;5!CL:0000154;7.78e-13;6!CL:0000150;7.16e-09;9!CL:0000362;7.16e-09;9|ontology_enrichment_celltype_v019_2=CL:0000349,6.01e-46,19;CL:0002536,1.42e-36,2;CL:0000317,2.45e-36,2;CL:1000448,2.45e-36,2;CL:0002308,2.45e-36,2;CL:0002140,2.45e-36,2;CL:0002537,2.23e-33,5;CL:0002577,8.95e-25,3;CL:0000622,3.35e-15,5;CL:0000154,7.78e-13,6;CL:0000150,7.16e-09,9;CL:0000362,7.16e-09,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1799!5.58e-07!1;DOID:10165!5.58e-07!1;DOID:1798!5.58e-07!1|ontology_enrichment_disease_v019=DOID:1799;8.95e-20;1!DOID:10165;8.95e-20;1!DOID:1798;8.95e-20;1|ontology_enrichment_disease_v019_2=DOID:1799,8.95e-20,1;DOID:10165,8.95e-20,1;DOID:1798,8.95e-20,1|ontology_enrichment_uberon=UBERON:0005631!1.74e-44!14;UBERON:0000158!1.74e-44!14;UBERON:0003124!9.25e-27!7;UBERON:0000478!4.93e-25!24;UBERON:0001987!8.88e-22!4;UBERON:0004340!8.88e-22!4;UBERON:0000305!1.20e-19!7;UBERON:0004871!3.68e-17!8;UBERON:0004923!4.63e-13!57;UBERON:0002419!6.76e-12!2;UBERON:0007771!6.76e-12!2;UBERON:0003297!6.76e-12!2;UBERON:0001821!6.76e-12!2;UBERON:0003487!6.76e-12!2;UBERON:0001820!6.76e-12!2;UBERON:0005089!6.76e-12!2;UBERON:0005088!6.76e-12!2;UBERON:0000365!5.79e-10!5;UBERON:0005910!2.23e-08!6;UBERON:0000476!8.19e-08!3;UBERON:0000920!8.19e-08!3|ontology_enrichment_uberon_v019=UBERON:0000305;3.01e-64;7!UBERON:0005631;4.28e-45;10!UBERON:0000158;4.28e-45;10!UBERON:0000478;2.24e-36;24!UBERON:0002419;2.45e-36;2!UBERON:0007771;2.45e-36;2!UBERON:0003297;2.45e-36;2!UBERON:0001821;2.45e-36;2!UBERON:0003487;2.45e-36;2!UBERON:0001820;2.45e-36;2!UBERON:0001987;7.08e-19;4|ontology_enrichment_uberon_v019_2=UBERON:0000305,3.01e-64,7;UBERON:0005631,2.34e-62,14;UBERON:0000158,2.34e-62,14;UBERON:0004871,2.85e-56,8;UBERON:0000478,2.30e-36,24;UBERON:0002419,2.45e-36,2;UBERON:0007771,2.45e-36,2;UBERON:0003297,2.45e-36,2;UBERON:0001821,2.45e-36,2;UBERON:0003487,2.45e-36,2;UBERON:0001820,2.45e-36,2;UBERON:0005089,2.45e-36,2;UBERON:0005088,2.45e-36,2;UBERON:0001987,7.41e-19,4;UBERON:0004340,7.41e-19,4;UBERON:0004923,4.33e-13,66;UBERON:0003124,3.30e-11,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,4.99306318531491,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01363417949149,8.90894042497916,12.2864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0.922255617552241,5.38545866458633,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3810953916253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:62257232..62257274,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:62257232..62257274,+ | |||
|id=chr2:62257232..62257274,+ | |||
|ontology_enrichment_celltype=CL:0000349!8.05e-17!3;CL:0002577!8.05e-17!3;CL:0000244!2.46e-12!4;CL:0000731!2.46e-12!4;CL:0002536!5.75e-12!2;CL:0000317!6.76e-12!2;CL:1000448!6.76e-12!2;CL:0002308!6.76e-12!2;CL:0002140!6.76e-12!2;CL:0002537!1.25e-10!5;CL:0000622!3.64e-10!5;CL:0000154!1.52e-08!6;CL:0002541!8.19e-08!3;CL:0002166!1.56e-07!3;CL:0000039!2.64e-07!7;CL:0000586!2.64e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000349;5.81e-46;19!CL:0002536;1.55e-36;2!CL:0000317;2.45e-36;2!CL:1000448;2.45e-36;2!CL:0002308;2.45e-36;2!CL:0002140;2.45e-36;2!CL:0002537;2.11e-33;5!CL:0002577;8.42e-25;3!CL:0000622;3.35e-15;5!CL:0000154;7.78e-13;6!CL:0000150;7.16e-09;9!CL:0000362;7.16e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,6.01e-46,19;CL:0002536,1.42e-36,2;CL:0000317,2.45e-36,2;CL:1000448,2.45e-36,2;CL:0002308,2.45e-36,2;CL:0002140,2.45e-36,2;CL:0002537,2.23e-33,5;CL:0002577,8.95e-25,3;CL:0000622,3.35e-15,5;CL:0000154,7.78e-13,6;CL:0000150,7.16e-09,9;CL:0000362,7.16e-09,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!5.58e-07!1;DOID:10165!5.58e-07!1;DOID:1798!5.58e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1799;8.95e-20;1!DOID:10165;8.95e-20;1!DOID:1798;8.95e-20;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,8.95e-20,1;DOID:10165,8.95e-20,1;DOID:1798,8.95e-20,1 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.74e-44!14;UBERON:0000158!1.74e-44!14;UBERON:0003124!9.25e-27!7;UBERON:0000478!4.93e-25!24;UBERON:0001987!8.88e-22!4;UBERON:0004340!8.88e-22!4;UBERON:0000305!1.20e-19!7;UBERON:0004871!3.68e-17!8;UBERON:0004923!4.63e-13!57;UBERON:0002419!6.76e-12!2;UBERON:0007771!6.76e-12!2;UBERON:0003297!6.76e-12!2;UBERON:0001821!6.76e-12!2;UBERON:0003487!6.76e-12!2;UBERON:0001820!6.76e-12!2;UBERON:0005089!6.76e-12!2;UBERON:0005088!6.76e-12!2;UBERON:0000365!5.79e-10!5;UBERON:0005910!2.23e-08!6;UBERON:0000476!8.19e-08!3;UBERON:0000920!8.19e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.01e-64;7!UBERON:0005631;4.28e-45;10!UBERON:0000158;4.28e-45;10!UBERON:0000478;2.24e-36;24!UBERON:0002419;2.45e-36;2!UBERON:0007771;2.45e-36;2!UBERON:0003297;2.45e-36;2!UBERON:0001821;2.45e-36;2!UBERON:0003487;2.45e-36;2!UBERON:0001820;2.45e-36;2!UBERON:0001987;7.08e-19;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,3.01e-64,7;UBERON:0005631,2.34e-62,14;UBERON:0000158,2.34e-62,14;UBERON:0004871,2.85e-56,8;UBERON:0000478,2.30e-36,24;UBERON:0002419,2.45e-36,2;UBERON:0007771,2.45e-36,2;UBERON:0003297,2.45e-36,2;UBERON:0001821,2.45e-36,2;UBERON:0003487,2.45e-36,2;UBERON:0001820,2.45e-36,2;UBERON:0005089,2.45e-36,2;UBERON:0005088,2.45e-36,2;UBERON:0001987,7.41e-19,4;UBERON:0004340,7.41e-19,4;UBERON:0004923,4.33e-13,66;UBERON:0003124,3.30e-11,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,2.90143676051299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,4.99306318531491,1.20956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,1.14853107599234,1.95018073810956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01363417949149,8.90894042497916,12.2864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0.922255617552241,5.38545866458633,0,0.638002319463839,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3810953916253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709618961301111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:62257232..62257274,+ | |||
}} |
Revision as of 19:13, 12 September 2013
Short description: | p@chr2:62257232..62257274, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:62257232..62257274, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 6.01e-46 | 19 |
amniotic epithelial cell | 1.42e-36 | 2 |
sebum secreting cell | 2.45e-36 | 2 |
epithelial cell of sweat gland | 2.45e-36 | 2 |
epithelial cell of skin gland | 2.45e-36 | 2 |
acinar cell of sebaceous gland | 2.45e-36 | 2 |
amnion mesenchymal stem cell | 2.23e-33 | 5 |
placental epithelial cell | 8.95e-25 | 3 |
acinar cell | 3.35e-15 | 5 |
protein secreting cell | 7.78e-13 | 6 |
glandular epithelial cell | 7.16e-09 | 9 |
epidermal cell | 7.16e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
amnion | 3.01e-64 | 7 |
extraembryonic membrane | 2.34e-62 | 14 |
membranous layer | 2.34e-62 | 14 |
somatic layer of lateral plate mesoderm | 2.85e-56 | 8 |
extraembryonic structure | 2.30e-36 | 24 |
skin gland | 2.45e-36 | 2 |
epidermis gland | 2.45e-36 | 2 |
gland of integumental system | 2.45e-36 | 2 |
sebaceous gland | 2.45e-36 | 2 |
skin sebaceous gland | 2.45e-36 | 2 |
sweat gland | 2.45e-36 | 2 |
sweat gland placode | 2.45e-36 | 2 |
sebaceous gland placode | 2.45e-36 | 2 |
placenta | 7.41e-19 | 4 |
allantois | 7.41e-19 | 4 |
organ component layer | 4.33e-13 | 66 |
chorion | 3.30e-11 | 7 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 8.95e-20 | 1 |
endocrine pancreas cancer | 8.95e-20 | 1 |
pancreatic endocrine carcinoma | 8.95e-20 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.