FFCP PHASE1:Hg19::chr2:128321442..128321453,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2584|description=CAGE_peak_at_chr2:128321442..128321453,+|id=chr2:128321442..128321453,+|ontology_enrichment_celltype=CL:0002057!3.44e-61!42;CL:0000860!1.28e-56!45;CL:0002009!7.94e-49!65;CL:0000738!1.93e-46!140;CL:0000557!4.54e-44!71;CL:0002194!5.73e-44!63;CL:0000576!5.73e-44!63;CL:0000040!5.73e-44!63;CL:0000559!5.73e-44!63;CL:0000766!1.38e-43!76;CL:0000839!7.30e-39!70;CL:0002087!1.51e-38!119;CL:0000037!8.96e-38!172;CL:0000566!8.96e-38!172;CL:0000988!4.02e-35!182;CL:0002031!1.02e-34!124;CL:0000763!4.17e-33!112;CL:0000049!4.17e-33!112;CL:0002032!2.18e-30!165;CL:0000837!2.18e-30!165;CL:0002393!3.90e-26!9;CL:0002397!3.90e-26!9;CL:0000134!1.69e-13!358;CL:0002320!4.94e-13!365;CL:0000784!1.15e-12!3;CL:0000875!4.26e-12!3;CL:0002396!4.26e-12!3;CL:0000219!2.19e-11!390;CL:0000842!9.91e-11!3;CL:0000048!2.02e-09!430;CL:0000723!3.83e-09!436;CL:0000034!8.77e-09!444;CL:0000451!1.70e-08!10;CL:0001014!3.35e-08!2;CL:0001016!3.35e-08!2;CL:0000224!3.68e-08!4|ontology_enrichment_celltype_v019=CL:0000784;1.03e-46;3!CL:0000875;4.02e-21;3!CL:0002396;4.02e-21;3!CL:0000451;2.83e-13;10!CL:0002393;3.39e-11;6!CL:0002397;3.39e-11;6!CL:0000576;1.14e-09;48|ontology_enrichment_celltype_v019_2=CL:0000784,7.56e-47,3;CL:0002393,2.60e-27,9;CL:0002397,2.60e-27,9;CL:0000875,4.02e-21,3;CL:0002396,4.02e-21,3;CL:0000860,2.80e-17,42;CL:0002057,2.80e-17,42;CL:0002194,1.35e-15,59;CL:0000576,1.35e-15,59;CL:0000040,1.35e-15,59;CL:0000559,1.35e-15,59;CL:0002009,4.49e-15,61;CL:0000473,4.51e-15,48;CL:0000234,4.51e-15,48;CL:0000839,6.64e-14,66;CL:0000557,1.09e-13,67;CL:0000451,2.60e-13,10;CL:0000766,1.04e-12,72;CL:0000738,1.69e-12,136;CL:0000037,6.33e-10,168;CL:0002087,7.58e-10,115;CL:0002031,2.10e-09,120;CL:0000988,2.29e-09,177;CL:0000763,2.73e-08,108;CL:0000049,2.73e-08,108;CL:0002032,8.51e-07,161;CL:0000837,8.51e-07,161|ontology_enrichment_development_v019=CL:0002057;5.66e-11;42!UBERON:0004872;9.94e-10;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;7.00e-17;1!DOID:0050177;7.00e-17;1!DOID:0050427;7.00e-17;1|ontology_enrichment_disease_v019_2=DOID:630,7.57e-17,1;DOID:0050177,7.57e-17,1;DOID:0050427,7.57e-17,1|ontology_enrichment_uberon=UBERON:0002390!1.49e-39!102;UBERON:0003061!1.49e-39!102;UBERON:0002371!2.95e-38!80;UBERON:0002193!2.41e-37!112;UBERON:0001474!4.73e-35!86;UBERON:0002405!4.44e-32!115;UBERON:0004765!1.08e-28!101;UBERON:0001434!1.08e-28!101;UBERON:0003081!4.77e-15!216;UBERON:0002204!2.77e-14!167;UBERON:0002384!3.24e-13!375|ontology_enrichment_uberon_v019=UBERON:0002106;2.17e-21;3!UBERON:0004177;3.03e-13;5!UBERON:0005057;3.03e-13;5|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.96e-21,3;UBERON:0004854,2.96e-21,3;UBERON:0009034,2.96e-21,3;UBERON:0002095,2.96e-21,3;UBERON:0004782,2.96e-21,3;UBERON:0003281,2.96e-21,3;UBERON:0009664,2.96e-21,3;UBERON:0002296,2.96e-21,3;UBERON:0005602,2.96e-21,3;UBERON:0001179,2.96e-21,3;UBERON:0006293,2.96e-21,3;UBERON:0002405,2.88e-15,93;UBERON:0002390,1.89e-14,98;UBERON:0003061,1.89e-14,98;UBERON:0002193,4.86e-13,108;UBERON:0002371,5.12e-12,76;UBERON:0001474,4.22e-11,82;UBERON:0004765,4.56e-10,90;UBERON:0004177,1.13e-09,7;UBERON:0005057,1.13e-09,7;UBERON:0001434,5.30e-09,100;UBERON:0000945,1.42e-08,8;UBERON:0010039,1.42e-08,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,2.76997704265939,0.802177789880567,0.868043482863407,0,0,0,0.145398238779565,0.377875943688809,0.727752183563449,0.697287110717054,0,0,0.28769239232215,0,0.47296445977717,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0.612167784741805,1.28371610830437,1.27867425159808,0,0,0,0.290209238628584,0.56738522469114,0.622822248995575,0,0,0.65156653411535,0,0.736555271975129,0.316462387440884,0.633765858935825,1.27562579979026,0,0,0.150176892841506,0,0.570025487482497,1.19350006319454,1.64397738388171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,1.90792499444274,4.0039643754609,2.22874500797739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2584 | |||
|description=CAGE_peak_at_chr2:128321442..128321453,+ | |||
|id=chr2:128321442..128321453,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.44e-61!42;CL:0000860!1.28e-56!45;CL:0002009!7.94e-49!65;CL:0000738!1.93e-46!140;CL:0000557!4.54e-44!71;CL:0002194!5.73e-44!63;CL:0000576!5.73e-44!63;CL:0000040!5.73e-44!63;CL:0000559!5.73e-44!63;CL:0000766!1.38e-43!76;CL:0000839!7.30e-39!70;CL:0002087!1.51e-38!119;CL:0000037!8.96e-38!172;CL:0000566!8.96e-38!172;CL:0000988!4.02e-35!182;CL:0002031!1.02e-34!124;CL:0000763!4.17e-33!112;CL:0000049!4.17e-33!112;CL:0002032!2.18e-30!165;CL:0000837!2.18e-30!165;CL:0002393!3.90e-26!9;CL:0002397!3.90e-26!9;CL:0000134!1.69e-13!358;CL:0002320!4.94e-13!365;CL:0000784!1.15e-12!3;CL:0000875!4.26e-12!3;CL:0002396!4.26e-12!3;CL:0000219!2.19e-11!390;CL:0000842!9.91e-11!3;CL:0000048!2.02e-09!430;CL:0000723!3.83e-09!436;CL:0000034!8.77e-09!444;CL:0000451!1.70e-08!10;CL:0001014!3.35e-08!2;CL:0001016!3.35e-08!2;CL:0000224!3.68e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.03e-46;3!CL:0000875;4.02e-21;3!CL:0002396;4.02e-21;3!CL:0000451;2.83e-13;10!CL:0002393;3.39e-11;6!CL:0002397;3.39e-11;6!CL:0000576;1.14e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,7.56e-47,3;CL:0002393,2.60e-27,9;CL:0002397,2.60e-27,9;CL:0000875,4.02e-21,3;CL:0002396,4.02e-21,3;CL:0000860,2.80e-17,42;CL:0002057,2.80e-17,42;CL:0002194,1.35e-15,59;CL:0000576,1.35e-15,59;CL:0000040,1.35e-15,59;CL:0000559,1.35e-15,59;CL:0002009,4.49e-15,61;CL:0000473,4.51e-15,48;CL:0000234,4.51e-15,48;CL:0000839,6.64e-14,66;CL:0000557,1.09e-13,67;CL:0000451,2.60e-13,10;CL:0000766,1.04e-12,72;CL:0000738,1.69e-12,136;CL:0000037,6.33e-10,168;CL:0002087,7.58e-10,115;CL:0002031,2.10e-09,120;CL:0000988,2.29e-09,177;CL:0000763,2.73e-08,108;CL:0000049,2.73e-08,108;CL:0002032,8.51e-07,161;CL:0000837,8.51e-07,161 | |||
|ontology_enrichment_development_v019=CL:0002057;5.66e-11;42!UBERON:0004872;9.94e-10;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;7.00e-17;1!DOID:0050177;7.00e-17;1!DOID:0050427;7.00e-17;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,7.57e-17,1;DOID:0050177,7.57e-17,1;DOID:0050427,7.57e-17,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.49e-39!102;UBERON:0003061!1.49e-39!102;UBERON:0002371!2.95e-38!80;UBERON:0002193!2.41e-37!112;UBERON:0001474!4.73e-35!86;UBERON:0002405!4.44e-32!115;UBERON:0004765!1.08e-28!101;UBERON:0001434!1.08e-28!101;UBERON:0003081!4.77e-15!216;UBERON:0002204!2.77e-14!167;UBERON:0002384!3.24e-13!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;2.17e-21;3!UBERON:0004177;3.03e-13;5!UBERON:0005057;3.03e-13;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,2.96e-21,3;UBERON:0004854,2.96e-21,3;UBERON:0009034,2.96e-21,3;UBERON:0002095,2.96e-21,3;UBERON:0004782,2.96e-21,3;UBERON:0003281,2.96e-21,3;UBERON:0009664,2.96e-21,3;UBERON:0002296,2.96e-21,3;UBERON:0005602,2.96e-21,3;UBERON:0001179,2.96e-21,3;UBERON:0006293,2.96e-21,3;UBERON:0002405,2.88e-15,93;UBERON:0002390,1.89e-14,98;UBERON:0003061,1.89e-14,98;UBERON:0002193,4.86e-13,108;UBERON:0002371,5.12e-12,76;UBERON:0001474,4.22e-11,82;UBERON:0004765,4.56e-10,90;UBERON:0004177,1.13e-09,7;UBERON:0005057,1.13e-09,7;UBERON:0001434,5.30e-09,100;UBERON:0000945,1.42e-08,8;UBERON:0010039,1.42e-08,8 | |||
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|short_description=p@chr2:128321442..128321453,+ | |||
}} |
Revision as of 13:24, 12 September 2013
Short description: | p@chr2:128321442..128321453, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:128321442..128321453, + |
Coexpression cluster: | C2584_Dendritic_CD14_Basophils_CD14CD16_Peripheral_CD34_granulocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 7.56e-47 | 3 |
intermediate monocyte | 2.60e-27 | 9 |
CD14-positive, CD16-positive monocyte | 2.60e-27 | 9 |
non-classical monocyte | 4.02e-21 | 3 |
CD14-low, CD16-positive monocyte | 4.02e-21 | 3 |
classical monocyte | 2.80e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.80e-17 | 42 |
monopoietic cell | 1.35e-15 | 59 |
monocyte | 1.35e-15 | 59 |
monoblast | 1.35e-15 | 59 |
promonocyte | 1.35e-15 | 59 |
macrophage dendritic cell progenitor | 4.49e-15 | 61 |
defensive cell | 4.51e-15 | 48 |
phagocyte | 4.51e-15 | 48 |
myeloid lineage restricted progenitor cell | 6.64e-14 | 66 |
granulocyte monocyte progenitor cell | 1.09e-13 | 67 |
dendritic cell | 2.60e-13 | 10 |
myeloid leukocyte | 1.04e-12 | 72 |
leukocyte | 1.69e-12 | 136 |
hematopoietic stem cell | 6.33e-10 | 168 |
nongranular leukocyte | 7.58e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.10e-09 | 120 |
hematopoietic cell | 2.29e-09 | 177 |
myeloid cell | 2.73e-08 | 108 |
common myeloid progenitor | 2.73e-08 | 108 |
hematopoietic oligopotent progenitor cell | 8.51e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.51e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
spleen | 2.96e-21 | 3 |
gastrointestinal system mesentery | 2.96e-21 | 3 |
stomach region | 2.96e-21 | 3 |
mesentery | 2.96e-21 | 3 |
gastrointestinal system serosa | 2.96e-21 | 3 |
mesentery of stomach | 2.96e-21 | 3 |
gut mesentery | 2.96e-21 | 3 |
dorsal mesentery | 2.96e-21 | 3 |
dorsal mesogastrium | 2.96e-21 | 3 |
peritoneal cavity | 2.96e-21 | 3 |
spleen primordium | 2.96e-21 | 3 |
immune system | 2.88e-15 | 93 |
hematopoietic system | 1.89e-14 | 98 |
blood island | 1.89e-14 | 98 |
hemolymphoid system | 4.86e-13 | 108 |
bone marrow | 5.12e-12 | 76 |
bone element | 4.22e-11 | 82 |
skeletal element | 4.56e-10 | 90 |
hemopoietic organ | 1.13e-09 | 7 |
immune organ | 1.13e-09 | 7 |
skeletal system | 5.30e-09 | 100 |
stomach | 1.42e-08 | 8 |
food storage organ | 1.42e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 7.57e-17 | 1 |
monogenic disease | 7.57e-17 | 1 |
xeroderma pigmentosum | 7.57e-17 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.