FFCP PHASE1:Hg19::chr2:220408260..220408340,-: Difference between revisions
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{{FFCP | 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757741,13.5805433935647,1.58013611732727,8.25314120113689,2.43401581223611,6.41369091784202,10.982456700641,7.8530499463217,6.22133695632683,6.88363774112444,1.65664801022791,1.53384128566484,4.23387050190929,10.9971296901144,6.82454048461504,2.8666168169323,10.4025551571947,10.894675931292,17.8000170474113,0,0.615976841137482,4.6392577253528,2.4285549652957,10.995154782719,4.97376937903421,5.47032417576815,1.92008339466232,1.20934568419972,11.4731761110672,2.70109553377806,6.55678681511872,15.5204707799303,1.96118657403124,27.102802916687,4.12247780941385,5.64388160621463,8.453114551668,25.8289214325482,1.50374268767766,0.902410431630081,3.0981758336728,8.39203511446591,4.58763333230399,3.69110286770174,7.30336388246517,3.66983426723633,3.87016874508919,5.52200467676146,5.91525964660958,5.23620828408453,4.7612415646386,22.6916961081718,18.4870251452567,22.9292077925608,3.15416062087697,7.97638675334977,4.43444753540029,4.38551967890521,1.06886962106224,4.77853477581194,1.50424523575425,15.6861905311756,9.11078042531007,2.48750831837634,2.0686599172379,3.41174371041569,6.90386851244847,2.51896748360424,2.54506328613017,5.60659312903067,7.38307036026713,13.5418516602007,2.8303177226605,2.73786640868225,4.57993960499195,6.88533171769693,6.98586748746628,5.61682553415724,5.33636729388577,23.1686738744328,30.8998695246659,2.34640942403454,4.15620910221746,16.6827433109453,1.33151354837103,2.81783311027437,3.52625341533556|short_description=p2@CHPF}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=79586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24291 | |||
|TSSclassifier=S | |||
|UniProt=F8W6H2 | |||
|association_with_transcript=0bp_to_ENST00000373891_5end | |||
|coexpression_cluster_id=C4191 | |||
|description=CAGE_peak_2_at_CHPF_5end | |||
|id=chr2:220408260..220408340,- | |||
|ontology_enrichment_celltype=CL:0000055!1.44e-23!180;CL:0000220!9.24e-13!246;CL:0000183!1.34e-12!59;CL:0002321!1.61e-12!248;CL:0000680!1.62e-12!57;CL:0000056!1.62e-12!57;CL:0000355!1.62e-12!57;CL:0000192!2.63e-12!42;CL:0000514!2.63e-12!42;CL:0000187!1.06e-11!54;CL:0000393!1.99e-10!60;CL:0000211!1.99e-10!60;CL:0000359!4.76e-10!32;CL:0000057!2.25e-08!75;CL:0000066!4.69e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.20e-09;32!CL:0000192;5.02e-09;43!CL:0000349;5.12e-08;19!CL:0000134;5.41e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.04e-13,250;CL:0000680,1.71e-12,58;CL:0000056,1.71e-12,58;CL:0000355,1.71e-12,58;CL:0000192,3.12e-12,43;CL:0000514,3.12e-12,43;CL:0000187,1.13e-11,55;CL:0000393,2.01e-10,61;CL:0000211,2.01e-10,61;CL:0000359,4.25e-10,32;CL:0000057,7.99e-09,76;CL:0000349,5.50e-08,19;CL:0000066,2.03e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000514;5.02e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.72e-18!365;UBERON:0002100!1.69e-16!216;UBERON:0000481!6.26e-14!347;UBERON:0003104!1.47e-12!238;UBERON:0009142!1.47e-12!238;UBERON:0000486!1.49e-12!82;UBERON:0005256!3.38e-12!143;UBERON:0001134!1.15e-10!61;UBERON:0002036!1.15e-10!61;UBERON:0003082!1.15e-10!61;UBERON:0000914!1.26e-10!83;UBERON:0002329!1.26e-10!83;UBERON:0003077!1.26e-10!83;UBERON:0003059!1.26e-10!83;UBERON:0007282!1.26e-10!83;UBERON:0009618!1.26e-10!83;UBERON:0007285!1.26e-10!83;UBERON:0001048!1.59e-10!168;UBERON:0004290!2.73e-10!70;UBERON:0002385!7.61e-10!63;UBERON:0001015!7.61e-10!63;UBERON:0000383!7.61e-10!63;UBERON:0004923!5.42e-08!57;UBERON:0000119!6.74e-08!312;UBERON:0000483!7.92e-08!309;UBERON:0000466!9.44e-08!126;UBERON:0000478!1.20e-07!24;UBERON:0009569!2.10e-07!113;UBERON:0005631!3.26e-07!14;UBERON:0000158!3.26e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;9.05e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.24e-15,199;UBERON:0000486,1.54e-12,83;UBERON:0003104,2.89e-12,160;UBERON:0009142,2.89e-12,160;UBERON:0005256,4.46e-11,122;UBERON:0001134,1.26e-10,62;UBERON:0002036,1.26e-10,62;UBERON:0003082,1.26e-10,62;UBERON:0007524,1.82e-10,73;UBERON:0002329,2.88e-10,71;UBERON:0003059,2.88e-10,71;UBERON:0007282,2.88e-10,71;UBERON:0004290,2.88e-10,71;UBERON:0009618,2.88e-10,71;UBERON:0003077,4.81e-10,72;UBERON:0007285,4.81e-10,72;UBERON:0002385,8.20e-10,64;UBERON:0001015,8.20e-10,64;UBERON:0000383,8.20e-10,64;UBERON:0007503,1.20e-09,78;UBERON:0001048,4.43e-09,160;UBERON:0004923,1.28e-08,66;UBERON:0000119,5.03e-08,309;UBERON:0000483,5.91e-08,306;UBERON:0000478,1.10e-07,24;UBERON:0005631,3.02e-07,14;UBERON:0000158,3.02e-07,14;UBERON:0009569,3.83e-07,112 | |||
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| |||
|short_description=p2@CHPF | |||
}} |
Revision as of 17:01, 12 September 2013
Short description: | p2@CHPF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CHPF_5end |
Coexpression cluster: | C4191_Smooth_Mesenchymal_leiomyoma_Fibroblast_Preadipocyte_Adipocyte_Placental |
Association with transcript: | 0bp_to_ENST00000373891_5end |
EntrezGene: | CHPF |
HGNC: | 24291 |
UniProt: | F8W6H2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.04e-13 | 250 |
muscle precursor cell | 1.71e-12 | 58 |
myoblast | 1.71e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.71e-12 | 58 |
smooth muscle cell | 3.12e-12 | 43 |
smooth muscle myoblast | 3.12e-12 | 43 |
muscle cell | 1.13e-11 | 55 |
electrically responsive cell | 2.01e-10 | 61 |
electrically active cell | 2.01e-10 | 61 |
vascular associated smooth muscle cell | 4.25e-10 | 32 |
fibroblast | 7.99e-09 | 76 |
extraembryonic cell | 5.50e-08 | 19 |
epithelial cell | 2.03e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
trunk | 1.24e-15 | 199 |
multilaminar epithelium | 1.54e-12 | 83 |
mesenchyme | 2.89e-12 | 160 |
entire embryonic mesenchyme | 2.89e-12 | 160 |
trunk mesenchyme | 4.46e-11 | 122 |
skeletal muscle tissue | 1.26e-10 | 62 |
striated muscle tissue | 1.26e-10 | 62 |
myotome | 1.26e-10 | 62 |
dense mesenchyme tissue | 1.82e-10 | 73 |
somite | 2.88e-10 | 71 |
presomitic mesoderm | 2.88e-10 | 71 |
presumptive segmental plate | 2.88e-10 | 71 |
dermomyotome | 2.88e-10 | 71 |
trunk paraxial mesoderm | 2.88e-10 | 71 |
paraxial mesoderm | 4.81e-10 | 72 |
presumptive paraxial mesoderm | 4.81e-10 | 72 |
muscle tissue | 8.20e-10 | 64 |
musculature | 8.20e-10 | 64 |
musculature of body | 8.20e-10 | 64 |
epithelial vesicle | 1.20e-09 | 78 |
primordium | 4.43e-09 | 160 |
organ component layer | 1.28e-08 | 66 |
cell layer | 5.03e-08 | 309 |
epithelium | 5.91e-08 | 306 |
extraembryonic structure | 1.10e-07 | 24 |
extraembryonic membrane | 3.02e-07 | 14 |
membranous layer | 3.02e-07 | 14 |
subdivision of trunk | 3.83e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.