FFCP PHASE1:Hg19::chr22:18593474..18593485,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51807|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12410|TSSclassifier=S|UniProt=B3KPW9,Q9NY65|association_with_transcript=21bp_to_ENST00000316027,NM_001193414,NM_018943_5end|description=CAGE_peak_8_at_TUBA8_5end|id=chr22:18593474..18593485,+|ontology_enrichment_celltype=CL:0002274!1.76e-08!5;CL:0000457!1.76e-08!5;CL:0002191!1.76e-08!5;CL:0000097!1.76e-08!5;CL:0000831!1.76e-08!5;CL:0002028!1.76e-08!5|ontology_enrichment_celltype_v019=CL:0000097;1.38e-23;5!CL:0000163;3.25e-13;9|ontology_enrichment_celltype_v019_2=CL:0000097,1.97e-23,5;CL:0002028,1.97e-23,5;CL:0000163,3.95e-13,9|ontology_enrichment_development_v019=UBERON:0006215;2.88e-11;3!UBERON:0010227;5.92e-09;1!UBERON:0010226;5.92e-09;1!UBERON:0006222;1.47e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:630;3.31e-09;1!DOID:0050177;3.31e-09;1!DOID:0050427;3.31e-09;1!DOID:178;1.47e-08;1!DOID:326;1.47e-08;1!DOID:3978;1.47e-08;1!DOID:3394;1.47e-08;1!DOID:5844;1.47e-08;1|ontology_enrichment_disease_v019_2=DOID:630,3.06e-09,1;DOID:0050177,3.06e-09,1;DOID:0050427,3.06e-09,1;DOID:178,1.22e-08,1;DOID:326,1.22e-08,1;DOID:3978,1.22e-08,1;DOID:3394,1.22e-08,1;DOID:5844,1.22e-08,1|ontology_enrichment_uberon=UBERON:0007023!3.52e-44!115;UBERON:0000178!1.65e-15!15;UBERON:0000179!1.65e-15!15;UBERON:0000463!1.65e-15!15;UBERON:0001049!2.47e-13!57;UBERON:0005068!2.47e-13!57;UBERON:0006241!2.47e-13!57;UBERON:0007135!2.47e-13!57;UBERON:0002616!1.35e-12!59;UBERON:0000955!4.75e-12!69;UBERON:0006238!4.75e-12!69;UBERON:0003075!1.92e-10!86;UBERON:0007284!1.92e-10!86;UBERON:0002346!1.47e-09!90;UBERON:0001017!1.71e-09!82;UBERON:0005743!2.78e-09!86;UBERON:0002020!4.63e-09!34;UBERON:0003528!4.63e-09!34;UBERON:0001869!9.36e-09!32;UBERON:0003080!1.19e-08!42;UBERON:0004733!2.09e-08!12;UBERON:0002028!2.09e-08!12;UBERON:0007277!2.09e-08!12;UBERON:0001893!5.48e-08!34;UBERON:0002780!6.80e-08!41;UBERON:0001890!6.80e-08!41;UBERON:0006240!6.80e-08!41;UBERON:0002298!7.48e-08!8;UBERON:0004732!1.34e-07!13;UBERON:0000073!1.35e-07!94;UBERON:0001016!1.35e-07!94;UBERON:0002619!2.47e-07!22;UBERON:0002791!3.38e-07!33;UBERON:0001950!5.45e-07!20|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-23;15!UBERON:0000179;1.29e-23;15!UBERON:0000463;1.29e-23;15!UBERON:0005090;2.07e-15;2!UBERON:0001630;2.07e-15;2!UBERON:0004151;4.21e-11;3!UBERON:0002390;1.52e-10;32!UBERON:0002084;5.92e-09;1!UBERON:0002079;5.92e-09;1!UBERON:0002082;5.92e-09;1!UBERON:0001389;1.47e-08;1!UBERON:0000026;1.47e-08;1!UBERON:0008784;1.47e-08;1!UBERON:0006058;1.47e-08;1!UBERON:0002426;1.47e-08;1!UBERON:0003831;1.47e-08;1!UBERON:0003898;1.47e-08;1!UBERON:0004830;1.47e-08;1!UBERON:0003663;1.47e-08;1!UBERON:0004256;1.47e-08;1!UBERON:0004708;1.47e-08;1!UBERON:0002101;1.47e-08;1!UBERON:0004709;1.47e-08;1!UBERON:0003830;1.47e-08;1!UBERON:0005175;1.47e-08;1!UBERON:0002529;1.47e-08;1!UBERON:0010538;1.47e-08;1!UBERON:0003661;1.47e-08;1!UBERON:0010890;1.47e-08;1!UBERON:0002471;1.47e-08;1!UBERON:0001774;1.47e-08;1!UBERON:0001383;1.47e-08;1!UBERON:0010758;1.47e-08;1!UBERON:0010707;1.47e-08;1!UBERON:0001103;1.47e-08;1!UBERON:0000978;1.47e-08;1!UBERON:0002103;1.47e-08;1!UBERON:0001665;1.47e-08;1!UBERON:0003823;1.47e-08;1!UBERON:0000154;1.47e-08;1!UBERON:0010709;1.47e-08;1!UBERON:0001134;1.20e-07;16!UBERON:0002036;1.20e-07;16|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.91e-23,15;UBERON:0000179,1.91e-23,15;UBERON:0000463,1.91e-23,15;UBERON:0005090,1.06e-15,2;UBERON:0001630,1.06e-15,2;UBERON:0004151,2.96e-11,3;UBERON:0007023,3.01e-10,114;UBERON:0002079,4.19e-09,1;UBERON:0002084,4.89e-09,1;UBERON:0002082,4.89e-09,1;UBERON:0010226,4.89e-09,1;UBERON:0001009,7.15e-09,112;UBERON:0005418,9.74e-09,1;UBERON:0001389,9.74e-09,1;UBERON:0000026,9.74e-09,1;UBERON:0008784,9.74e-09,1;UBERON:0006058,9.74e-09,1;UBERON:0003663,9.74e-09,1;UBERON:0004256,9.74e-09,1;UBERON:0004708,9.74e-09,1;UBERON:0002101,9.74e-09,1;UBERON:0004709,9.74e-09,1;UBERON:0002529,9.74e-09,1;UBERON:0010538,9.74e-09,1;UBERON:0003661,9.74e-09,1;UBERON:0010890,9.74e-09,1;UBERON:0002471,9.74e-09,1;UBERON:0001383,9.74e-09,1;UBERON:0004357,9.74e-09,1;UBERON:0004347,9.74e-09,1;UBERON:0005420,9.74e-09,1;UBERON:0005732,9.74e-09,1;UBERON:0010758,9.74e-09,1;UBERON:0010707,9.74e-09,1;UBERON:0000978,9.74e-09,1;UBERON:0002103,9.74e-09,1;UBERON:0001665,9.74e-09,1;UBERON:0003823,9.74e-09,1;UBERON:0000154,9.74e-09,1;UBERON:0010709,9.74e-09,1;UBERON:0005733,9.74e-09,1;UBERON:0005730,9.74e-09,1;UBERON:0002426,1.13e-08,1;UBERON:0003831,1.13e-08,1;UBERON:0003898,1.13e-08,1;UBERON:0004830,1.13e-08,1;UBERON:0003830,1.13e-08,1;UBERON:0005175,1.13e-08,1;UBERON:0001774,1.13e-08,1;UBERON:0001103,1.13e-08,1;UBERON:0010084,1.13e-08,1;UBERON:0002390,4.27e-07,98;UBERON:0003061,4.27e-07,98|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0.408001382488506,0,0,0,0,0.61130724598361,0.656804715599566,0.314843125254717,0.786728553697808,0.383829398097213,0,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51807 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12410 | |||
|TSSclassifier=S | |||
|UniProt=B3KPW9,Q9NY65 | |||
|association_with_transcript=21bp_to_ENST00000316027,NM_001193414,NM_018943_5end | |||
|description=CAGE_peak_8_at_TUBA8_5end | |||
|id=chr22:18593474..18593485,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.76e-08!5;CL:0000457!1.76e-08!5;CL:0002191!1.76e-08!5;CL:0000097!1.76e-08!5;CL:0000831!1.76e-08!5;CL:0002028!1.76e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.38e-23;5!CL:0000163;3.25e-13;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.97e-23,5;CL:0002028,1.97e-23,5;CL:0000163,3.95e-13,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.88e-11;3!UBERON:0010227;5.92e-09;1!UBERON:0010226;5.92e-09;1!UBERON:0006222;1.47e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;3.31e-09;1!DOID:0050177;3.31e-09;1!DOID:0050427;3.31e-09;1!DOID:178;1.47e-08;1!DOID:326;1.47e-08;1!DOID:3978;1.47e-08;1!DOID:3394;1.47e-08;1!DOID:5844;1.47e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.06e-09,1;DOID:0050177,3.06e-09,1;DOID:0050427,3.06e-09,1;DOID:178,1.22e-08,1;DOID:326,1.22e-08,1;DOID:3978,1.22e-08,1;DOID:3394,1.22e-08,1;DOID:5844,1.22e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.52e-44!115;UBERON:0000178!1.65e-15!15;UBERON:0000179!1.65e-15!15;UBERON:0000463!1.65e-15!15;UBERON:0001049!2.47e-13!57;UBERON:0005068!2.47e-13!57;UBERON:0006241!2.47e-13!57;UBERON:0007135!2.47e-13!57;UBERON:0002616!1.35e-12!59;UBERON:0000955!4.75e-12!69;UBERON:0006238!4.75e-12!69;UBERON:0003075!1.92e-10!86;UBERON:0007284!1.92e-10!86;UBERON:0002346!1.47e-09!90;UBERON:0001017!1.71e-09!82;UBERON:0005743!2.78e-09!86;UBERON:0002020!4.63e-09!34;UBERON:0003528!4.63e-09!34;UBERON:0001869!9.36e-09!32;UBERON:0003080!1.19e-08!42;UBERON:0004733!2.09e-08!12;UBERON:0002028!2.09e-08!12;UBERON:0007277!2.09e-08!12;UBERON:0001893!5.48e-08!34;UBERON:0002780!6.80e-08!41;UBERON:0001890!6.80e-08!41;UBERON:0006240!6.80e-08!41;UBERON:0002298!7.48e-08!8;UBERON:0004732!1.34e-07!13;UBERON:0000073!1.35e-07!94;UBERON:0001016!1.35e-07!94;UBERON:0002619!2.47e-07!22;UBERON:0002791!3.38e-07!33;UBERON:0001950!5.45e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.29e-23;15!UBERON:0000179;1.29e-23;15!UBERON:0000463;1.29e-23;15!UBERON:0005090;2.07e-15;2!UBERON:0001630;2.07e-15;2!UBERON:0004151;4.21e-11;3!UBERON:0002390;1.52e-10;32!UBERON:0002084;5.92e-09;1!UBERON:0002079;5.92e-09;1!UBERON:0002082;5.92e-09;1!UBERON:0001389;1.47e-08;1!UBERON:0000026;1.47e-08;1!UBERON:0008784;1.47e-08;1!UBERON:0006058;1.47e-08;1!UBERON:0002426;1.47e-08;1!UBERON:0003831;1.47e-08;1!UBERON:0003898;1.47e-08;1!UBERON:0004830;1.47e-08;1!UBERON:0003663;1.47e-08;1!UBERON:0004256;1.47e-08;1!UBERON:0004708;1.47e-08;1!UBERON:0002101;1.47e-08;1!UBERON:0004709;1.47e-08;1!UBERON:0003830;1.47e-08;1!UBERON:0005175;1.47e-08;1!UBERON:0002529;1.47e-08;1!UBERON:0010538;1.47e-08;1!UBERON:0003661;1.47e-08;1!UBERON:0010890;1.47e-08;1!UBERON:0002471;1.47e-08;1!UBERON:0001774;1.47e-08;1!UBERON:0001383;1.47e-08;1!UBERON:0010758;1.47e-08;1!UBERON:0010707;1.47e-08;1!UBERON:0001103;1.47e-08;1!UBERON:0000978;1.47e-08;1!UBERON:0002103;1.47e-08;1!UBERON:0001665;1.47e-08;1!UBERON:0003823;1.47e-08;1!UBERON:0000154;1.47e-08;1!UBERON:0010709;1.47e-08;1!UBERON:0001134;1.20e-07;16!UBERON:0002036;1.20e-07;16 | |||
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|short_description=p8@TUBA8 | |||
}} |
Revision as of 10:57, 12 September 2013
Short description: | p8@TUBA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_TUBA8_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000316027, NM_001193414, NM_018943_5end |
EntrezGene: | TUBA8 |
HGNC: | 12410 |
UniProt: | B3KPW9Q9NY65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.97e-23 | 5 |
basophil mast progenitor cell | 1.97e-23 | 5 |
endocrine cell | 3.95e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.06e-09 | 1 |
monogenic disease | 3.06e-09 | 1 |
xeroderma pigmentosum | 3.06e-09 | 1 |
vascular disease | 1.22e-08 | 1 |
ischemia | 1.22e-08 | 1 |
extrinsic cardiomyopathy | 1.22e-08 | 1 |
myocardial ischemia | 1.22e-08 | 1 |
myocardial infarction | 1.22e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.