FFCP PHASE1:Hg19::chr3:119379472..119379475,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=64091|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17648|TSSclassifier=S|UniProt=C9J3P7|association_with_transcript=15bp_to_ENST00000341124_5end|description=CAGE_peak_6_at_POPDC2_5end|id=chr3:119379472..119379475,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010227;1.71e-66;1!UBERON:0004140;1.71e-66;1!UBERON:0005754;4.66e-66;1!UBERON:0007297;7.04e-34;2!UBERON:0004872;8.57e-11;7!UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10|ontology_enrichment_disease=DOID:114!2.16e-14!2;DOID:178!3.32e-08!1;DOID:326!3.32e-08!1;DOID:3978!3.32e-08!1;DOID:3394!3.32e-08!1;DOID:5844!3.32e-08!1;DOID:1287!1.27e-07!4|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.12e-30!115;UBERON:0007100!8.87e-15!27;UBERON:0006947!4.80e-10!3;UBERON:0004054!4.80e-10!3;UBERON:0004151!5.02e-10!3;UBERON:0003978!9.30e-10!3;UBERON:0009751!9.30e-10!3;UBERON:0000946!9.30e-10!3;UBERON:0002523!9.30e-10!3;UBERON:0005983!9.30e-10!3;UBERON:0002165!9.30e-10!3;UBERON:0002062!9.30e-10!3;UBERON:0007280!9.30e-10!3;UBERON:0003103!1.08e-09!69;UBERON:0002079!2.89e-08!1;UBERON:0000998!3.10e-08!1;UBERON:0006868!3.10e-08!1;UBERON:0002135!4.07e-08!1;UBERON:0001000!4.35e-08!1;UBERON:0005352!4.35e-08!1;UBERON:0002084!4.99e-08!1;UBERON:0002082!4.99e-08!1;UBERON:0004706!4.99e-08!1;UBERON:0005418!5.33e-08!1;UBERON:0001389!5.33e-08!1;UBERON:0000026!5.33e-08!1;UBERON:0008784!5.33e-08!1;UBERON:0006058!5.33e-08!1;UBERON:0003663!5.33e-08!1;UBERON:0001383!5.33e-08!1;UBERON:0004256!5.33e-08!1;UBERON:0002529!5.33e-08!1;UBERON:0004708!5.33e-08!1;UBERON:0002101!5.33e-08!1;UBERON:0004709!5.33e-08!1;UBERON:0003661!5.33e-08!1;UBERON:0002471!5.33e-08!1;UBERON:0004357!5.33e-08!1;UBERON:0009872!5.33e-08!1;UBERON:0004347!5.33e-08!1;UBERON:0005420!5.33e-08!1;UBERON:0005732!5.33e-08!1;UBERON:0006057!5.33e-08!1;UBERON:0000978!5.33e-08!1;UBERON:0002103!5.33e-08!1;UBERON:0001665!5.33e-08!1;UBERON:0003823!5.33e-08!1;UBERON:0000154!5.33e-08!1;UBERON:0005733!5.33e-08!1;UBERON:0005730!5.33e-08!1;UBERON:0002146!9.10e-08!1;UBERON:0005623!9.10e-08!1;UBERON:0005904!9.74e-08!4;UBERON:0002902!1.64e-07!1;UBERON:0009899!1.64e-07!1;UBERON:0002372!1.75e-07!1;UBERON:0001961!1.75e-07!1;UBERON:0001744!1.75e-07!1;UBERON:0001735!1.75e-07!1;UBERON:0002022!1.99e-07!1;UBERON:0000948!8.13e-07!24;UBERON:0005498!8.13e-07!24;UBERON:0004140!8.13e-07!24;UBERON:0009881!8.13e-07!24;UBERON:0004141!8.13e-07!24;UBERON:0003084!8.13e-07!24;UBERON:0007005!8.13e-07!24;UBERON:0004139!8.13e-07!24;UBERON:0004291!8.13e-07!24|ontology_enrichment_uberon_v019=UBERON:0002079;1.71e-66;1!UBERON:0000998;4.66e-66;1!UBERON:0006868;4.66e-66;1!UBERON:0002081;4.27e-34;2!UBERON:0004151;2.93e-23;3!UBERON:0006947;4.09e-23;3!UBERON:0004054;4.09e-23;3!UBERON:0005904;1.03e-17;4!UBERON:0000948;3.77e-13;22!UBERON:0007100;1.03e-11;25!UBERON:0000473;1.47e-09;8!UBERON:0000058;6.56e-08;10!UBERON:0003135;2.63e-07;11!UBERON:0003937;8.38e-07;12!UBERON:0005399;8.38e-07;12|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.39e-66,1;UBERON:0000998,4.66e-66,1;UBERON:0006868,4.66e-66,1;UBERON:0002081,5.04e-34,2;UBERON:0010227,5.04e-34,2;UBERON:0004151,3.27e-23,3;UBERON:0006947,4.09e-23,3;UBERON:0004054,4.09e-23,3;UBERON:0005904,1.03e-17,4;UBERON:0000948,3.75e-12,24;UBERON:0005498,3.75e-12,24;UBERON:0004140,3.75e-12,24;UBERON:0009881,3.75e-12,24;UBERON:0004141,3.75e-12,24;UBERON:0003084,3.75e-12,24;UBERON:0007005,3.75e-12,24;UBERON:0004139,3.75e-12,24;UBERON:0004291,3.75e-12,24;UBERON:0007100,6.25e-11,27;UBERON:0003103,8.58e-10,68;UBERON:0000473,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0003135,2.63e-07,11;UBERON:0004876,2.63e-07,11;UBERON:0003937,8.38e-07,12;UBERON:0005399,8.38e-07,12;UBERON:0003887,8.38e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211931901159562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=64091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17648 | |||
|TSSclassifier=S | |||
|UniProt=C9J3P7 | |||
|association_with_transcript=15bp_to_ENST00000341124_5end | |||
|description=CAGE_peak_6_at_POPDC2_5end | |||
|id=chr3:119379472..119379475,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;1.71e-66;1!UBERON:0004140;1.71e-66;1!UBERON:0005754;4.66e-66;1!UBERON:0007297;7.04e-34;2!UBERON:0004872;8.57e-11;7!UBERON:0003918;6.56e-08;10!UBERON:0007687;6.56e-08;10 | |||
|ontology_enrichment_disease=DOID:114!2.16e-14!2;DOID:178!3.32e-08!1;DOID:326!3.32e-08!1;DOID:3978!3.32e-08!1;DOID:3394!3.32e-08!1;DOID:5844!3.32e-08!1;DOID:1287!1.27e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.12e-30!115;UBERON:0007100!8.87e-15!27;UBERON:0006947!4.80e-10!3;UBERON:0004054!4.80e-10!3;UBERON:0004151!5.02e-10!3;UBERON:0003978!9.30e-10!3;UBERON:0009751!9.30e-10!3;UBERON:0000946!9.30e-10!3;UBERON:0002523!9.30e-10!3;UBERON:0005983!9.30e-10!3;UBERON:0002165!9.30e-10!3;UBERON:0002062!9.30e-10!3;UBERON:0007280!9.30e-10!3;UBERON:0003103!1.08e-09!69;UBERON:0002079!2.89e-08!1;UBERON:0000998!3.10e-08!1;UBERON:0006868!3.10e-08!1;UBERON:0002135!4.07e-08!1;UBERON:0001000!4.35e-08!1;UBERON:0005352!4.35e-08!1;UBERON:0002084!4.99e-08!1;UBERON:0002082!4.99e-08!1;UBERON:0004706!4.99e-08!1;UBERON:0005418!5.33e-08!1;UBERON:0001389!5.33e-08!1;UBERON:0000026!5.33e-08!1;UBERON:0008784!5.33e-08!1;UBERON:0006058!5.33e-08!1;UBERON:0003663!5.33e-08!1;UBERON:0001383!5.33e-08!1;UBERON:0004256!5.33e-08!1;UBERON:0002529!5.33e-08!1;UBERON:0004708!5.33e-08!1;UBERON:0002101!5.33e-08!1;UBERON:0004709!5.33e-08!1;UBERON:0003661!5.33e-08!1;UBERON:0002471!5.33e-08!1;UBERON:0004357!5.33e-08!1;UBERON:0009872!5.33e-08!1;UBERON:0004347!5.33e-08!1;UBERON:0005420!5.33e-08!1;UBERON:0005732!5.33e-08!1;UBERON:0006057!5.33e-08!1;UBERON:0000978!5.33e-08!1;UBERON:0002103!5.33e-08!1;UBERON:0001665!5.33e-08!1;UBERON:0003823!5.33e-08!1;UBERON:0000154!5.33e-08!1;UBERON:0005733!5.33e-08!1;UBERON:0005730!5.33e-08!1;UBERON:0002146!9.10e-08!1;UBERON:0005623!9.10e-08!1;UBERON:0005904!9.74e-08!4;UBERON:0002902!1.64e-07!1;UBERON:0009899!1.64e-07!1;UBERON:0002372!1.75e-07!1;UBERON:0001961!1.75e-07!1;UBERON:0001744!1.75e-07!1;UBERON:0001735!1.75e-07!1;UBERON:0002022!1.99e-07!1;UBERON:0000948!8.13e-07!24;UBERON:0005498!8.13e-07!24;UBERON:0004140!8.13e-07!24;UBERON:0009881!8.13e-07!24;UBERON:0004141!8.13e-07!24;UBERON:0003084!8.13e-07!24;UBERON:0007005!8.13e-07!24;UBERON:0004139!8.13e-07!24;UBERON:0004291!8.13e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;1.71e-66;1!UBERON:0000998;4.66e-66;1!UBERON:0006868;4.66e-66;1!UBERON:0002081;4.27e-34;2!UBERON:0004151;2.93e-23;3!UBERON:0006947;4.09e-23;3!UBERON:0004054;4.09e-23;3!UBERON:0005904;1.03e-17;4!UBERON:0000948;3.77e-13;22!UBERON:0007100;1.03e-11;25!UBERON:0000473;1.47e-09;8!UBERON:0000058;6.56e-08;10!UBERON:0003135;2.63e-07;11!UBERON:0003937;8.38e-07;12!UBERON:0005399;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,2.39e-66,1;UBERON:0000998,4.66e-66,1;UBERON:0006868,4.66e-66,1;UBERON:0002081,5.04e-34,2;UBERON:0010227,5.04e-34,2;UBERON:0004151,3.27e-23,3;UBERON:0006947,4.09e-23,3;UBERON:0004054,4.09e-23,3;UBERON:0005904,1.03e-17,4;UBERON:0000948,3.75e-12,24;UBERON:0005498,3.75e-12,24;UBERON:0004140,3.75e-12,24;UBERON:0009881,3.75e-12,24;UBERON:0004141,3.75e-12,24;UBERON:0003084,3.75e-12,24;UBERON:0007005,3.75e-12,24;UBERON:0004139,3.75e-12,24;UBERON:0004291,3.75e-12,24;UBERON:0007100,6.25e-11,27;UBERON:0003103,8.58e-10,68;UBERON:0000473,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0003135,2.63e-07,11;UBERON:0004876,2.63e-07,11;UBERON:0003937,8.38e-07,12;UBERON:0005399,8.38e-07,12;UBERON:0003887,8.38e-07,12 | |||
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|short_description=p6@POPDC2 | |||
}} |
Revision as of 21:03, 12 September 2013
Short description: | p6@POPDC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_POPDC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 15bp_to_ENST00000341124_5end |
EntrezGene: | POPDC2 |
HGNC: | 17648 |
UniProt: | C9J3P7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.39e-66 | 1 |
seminal vesicle | 4.66e-66 | 1 |
seminal fluid secreting gland | 4.66e-66 | 1 |
cardiac atrium | 5.04e-34 | 2 |
future cardiac atrium | 5.04e-34 | 2 |
cardiac chamber | 3.27e-23 | 3 |
male genital duct | 4.09e-23 | 3 |
internal male genitalia | 4.09e-23 | 3 |
duct of male reproductive system | 1.03e-17 | 4 |
heart | 3.75e-12 | 24 |
primitive heart tube | 3.75e-12 | 24 |
primary heart field | 3.75e-12 | 24 |
anterior lateral plate mesoderm | 3.75e-12 | 24 |
heart tube | 3.75e-12 | 24 |
heart primordium | 3.75e-12 | 24 |
cardiac mesoderm | 3.75e-12 | 24 |
cardiogenic plate | 3.75e-12 | 24 |
heart rudiment | 3.75e-12 | 24 |
primary circulatory organ | 6.25e-11 | 27 |
compound organ | 8.58e-10 | 68 |
testis | 1.47e-09 | 8 |
mesonephros | 1.21e-08 | 9 |
pronephros | 1.21e-08 | 9 |
nephrogenic cord | 1.21e-08 | 9 |
pronephric mesoderm | 1.21e-08 | 9 |
rostral part of nephrogenic cord | 1.21e-08 | 9 |
presumptive pronephric mesoderm | 1.21e-08 | 9 |
male reproductive organ | 2.63e-07 | 11 |
urogenital ridge | 2.63e-07 | 11 |
sex gland | 8.38e-07 | 12 |
male reproductive gland | 8.38e-07 | 12 |
intraembryonic coelom | 8.38e-07 | 12 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.