FFCP PHASE1:Hg19::chr8:134276816..134276849,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10397|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7679|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000517745_5end|coexpression_cluster_id=C862|description=CAGE_peak_2_at_NDRG1_5end|id=chr8:134276816..134276849,-|ontology_enrichment_celltype=CL:0002057!3.07e-11!42;CL:0000860!4.38e-10!45;CL:0002194!8.67e-08!63;CL:0000576!8.67e-08!63;CL:0000040!8.67e-08!63;CL:0000559!8.67e-08!63;CL:0000557!1.19e-07!71;CL:0000839!1.55e-07!70;CL:0002009!1.63e-07!65;CL:0000766!2.78e-07!76|ontology_enrichment_celltype_v019=CL:0000860;1.07e-22;33!CL:0002057;1.07e-22;33!CL:0000473;3.11e-15;39!CL:0000234;3.11e-15;39!CL:0002368;9.59e-10;13!CL:0000576;1.78e-09;48!CL:0000244;2.02e-07;4!CL:0000731;2.02e-07;4|ontology_enrichment_celltype_v019_2=CL:0000860,1.37e-17,42;CL:0002057,1.37e-17,42;CL:0000473,1.20e-15,48;CL:0000234,1.20e-15,48;CL:0002194,5.71e-11,59;CL:0000576,5.71e-11,59;CL:0000040,5.71e-11,59;CL:0000559,5.71e-11,59;CL:0002009,2.23e-10,61;CL:0002368,9.26e-10,13;CL:0000839,4.57e-09,66;CL:0000557,7.88e-09,67;CL:0000766,1.28e-08,72;CL:0000244,3.41e-07,4;CL:0000731,3.41e-07,4|ontology_enrichment_development_v019=CL:0002057;9.49e-14;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.27e-07!115|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.25e-07,76|phase1_expression=0.54503513781167,1.92690471501885,1.55049844505568,0,2.23480547213644,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,1.46062018077475,0.975865597581014,0,0.408001382488506,0,0,0,0,0.0764134057479513,0,0,0,0,0.619264493264304,1.83884244895785,3.0120591877825,7.02532619316897,0,0,0,0.553995408531877,0,0,0.223915474239924,0.32389366601898,0.515151135268373,2.18097358169347,1.13362783106643,2.42584061187816,3.0215774797739,3.70051099219643,0.309706370895104,2.58923153089935,4.35473201099471,3.07426898855161,1.37898272294647,1.93645405075148,0,2.44715041405386,2.18324920046277,2.02251136000576,2.44867113896722,1.60464513538047,1.27867425159808,0.659702600373432,3.19141852194611,0.852449501065388,1.45104619314292,1.70215567407342,1.24564449799115,2.00998932205395,1.5644487552606,1.95469960234605,1.21079900526674,1.84138817993782,1.89877432464531,0.211255286311942,0.425208599930087,0.209658645508376,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0,0.547992461293902,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,1.17903228824749,0.616804496998528,0.668745981562712,0,0,0,0.557052284425868,0.294605907474837,0.443067789167242,0.541607727530031,0.768547918354051,0.390178042679635,0.328875809207352,0.276350017785848,0,0.296573126324121,0.802622484269139,0,0.226618685395132,0.383220493601921,0,0,0,0.651083453856419,0,0.301150238155546,0,0,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0.670700859703636,0,0.722878304769133,1.00267582127178,0.724232594804119,0.795285947051099,1.45990461090791,0,0,0,0.654895377488563,1.82147644146271,0.370784442784429,0.324547393654683,0.174129737299267,0.26591592103773,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0.402829317109147,1.52054421143703,1.22031028774085,0.367663080345869,0,0,0,0,0,0,0.366403487860815,2.63560834872127,0,3.05265836499774,0,0.379891534993739,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0.163461903113459,0,0,0,0,0,0.597794722207204,0,0,0.140450806702248,0,0.122834317311768,0.206651562351531,0,0.741800787835671,0,0.718618141816238,0,0.250237039743928,0,0,0.30648779579902,0.600952235626387,0,0.358779271377724,0,0.423863802319124,0,0.412210116953756,0.515281080091258,0.37223371266318,0,0.389748020644795,0.504867548488229,0.552299391853796,0.323292113637624,0,0.10075209822764,0,0.773043412653187,1.09098448236334,0,0,0,0,0.414644220061482,0,0,1.56449532329816,2.57296375277154,0,0.464367928031979,0,0.828147600278907,0.842923450390509,0.482022059766964,1.32352767278873,0.653638332277218,0.474541238222193,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0,0,2.74375713521564,0,1.70899253099772,0.555530670951178,0,0,0,0,0,0.721832238805369,0,0.570762456703795,0.790204397959275,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0.16798212819886,0.141775097242386,2.23896306757121,1.45316969256981,3.4504441124869,0.492663237895943,0.088048434013226,0.414656231081544,0.720599767084807,0.6312121671319,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0.871533458600294,0.099972991182057,1.2162378064119,0,0,0,0,0,0.144781306667579,1.02738161275192,0.179060963239896,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0.749007023947182,0,0,0.613457458595699,0,0,0.831883446123229,0.535286966391485,0,0.117141414992713,0.601892199455438,2.27407504055985,2.0694614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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10397 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7679 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000517745_5end | |||
|coexpression_cluster_id=C862 | |||
|description=CAGE_peak_2_at_NDRG1_5end | |||
|id=chr8:134276816..134276849,- | |||
|ontology_enrichment_celltype=CL:0002057!3.07e-11!42;CL:0000860!4.38e-10!45;CL:0002194!8.67e-08!63;CL:0000576!8.67e-08!63;CL:0000040!8.67e-08!63;CL:0000559!8.67e-08!63;CL:0000557!1.19e-07!71;CL:0000839!1.55e-07!70;CL:0002009!1.63e-07!65;CL:0000766!2.78e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.07e-22;33!CL:0002057;1.07e-22;33!CL:0000473;3.11e-15;39!CL:0000234;3.11e-15;39!CL:0002368;9.59e-10;13!CL:0000576;1.78e-09;48!CL:0000244;2.02e-07;4!CL:0000731;2.02e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.37e-17,42;CL:0002057,1.37e-17,42;CL:0000473,1.20e-15,48;CL:0000234,1.20e-15,48;CL:0002194,5.71e-11,59;CL:0000576,5.71e-11,59;CL:0000040,5.71e-11,59;CL:0000559,5.71e-11,59;CL:0002009,2.23e-10,61;CL:0002368,9.26e-10,13;CL:0000839,4.57e-09,66;CL:0000557,7.88e-09,67;CL:0000766,1.28e-08,72;CL:0000244,3.41e-07,4;CL:0000731,3.41e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002057;9.49e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.27e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.25e-07,76 | |||
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| |||
|short_description=p2@NDRG1 | |||
}} |
Revision as of 03:52, 14 September 2013
Short description: | p2@NDRG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_NDRG1_5end |
Coexpression cluster: | C862_renal_Urothelial_Small_Esophageal_colon_Prostate_amniotic |
Association with transcript: | 0bp_to_ENST00000517745_5end |
EntrezGene: | NDRG1 |
HGNC: | 7679 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.37e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.37e-17 | 42 |
defensive cell | 1.20e-15 | 48 |
phagocyte | 1.20e-15 | 48 |
monopoietic cell | 5.71e-11 | 59 |
monocyte | 5.71e-11 | 59 |
monoblast | 5.71e-11 | 59 |
promonocyte | 5.71e-11 | 59 |
macrophage dendritic cell progenitor | 2.23e-10 | 61 |
respiratory epithelial cell | 9.26e-10 | 13 |
myeloid lineage restricted progenitor cell | 4.57e-09 | 66 |
granulocyte monocyte progenitor cell | 7.88e-09 | 67 |
myeloid leukocyte | 1.28e-08 | 72 |
transitional epithelial cell | 3.41e-07 | 4 |
urothelial cell | 3.41e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.25e-07 | 76 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.