FFCP PHASE1:Hg19::chr11:63993601..63993689,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83707 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20316 | |||
|TSSclassifier=strong | |||
|UniProt=Q86TN4,F5H8A0 | |||
|association_with_transcript=0bp_to_ENST00000317459,ENST00000394547,ENST00000537907,ENST00000539595,ENST00000542040,ENST00000545812_5end | |||
|description=CAGE_peak_1_at_TRPT1_5end | |||
|id=chr11:63993601..63993689,- | |||
|ontology_enrichment_celltype=CL:0000055!1.05e-10!180;CL:0000192!8.95e-10!42;CL:0000514!8.95e-10!42;CL:0000359!9.15e-10!32;CL:0000183!5.25e-09!59;CL:0000220!2.75e-08!246;CL:0002321!5.53e-08!248;CL:0000393!1.91e-07!60;CL:0000211!1.91e-07!60;CL:0000187!2.08e-07!54;CL:0000680!8.07e-07!57;CL:0000056!8.07e-07!57;CL:0000355!8.07e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.20e-09;32!CL:1000497;5.46e-07;17!CL:0002518;5.46e-07;17!CL:0000192;7.72e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.15e-10,32;CL:0000192,5.52e-09,43;CL:0000514,5.52e-09,43;CL:0002321,1.16e-07,250;CL:1000497,5.29e-07,17;CL:0002518,5.29e-07,17;CL:0000393,6.51e-07,61;CL:0000211,6.51e-07,61;CL:0000187,7.57e-07,55;CL:1000507,9.85e-07,10;CL:1000494,9.85e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;7.72e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.95e-14!216;UBERON:0009569!3.07e-11!113;UBERON:0003104!6.19e-11!238;UBERON:0009142!6.19e-11!238;UBERON:0005256!1.24e-10!143;UBERON:0003103!1.58e-10!69;UBERON:0000475!3.88e-10!365;UBERON:0003914!1.32e-09!118;UBERON:0000481!1.89e-09!347;UBERON:0001134!1.61e-08!61;UBERON:0002036!1.61e-08!61;UBERON:0003082!1.61e-08!61;UBERON:0000464!4.54e-08!104;UBERON:0002385!4.65e-08!63;UBERON:0001015!4.65e-08!63;UBERON:0000383!4.65e-08!63;UBERON:0000486!7.70e-08!82;UBERON:0004290!9.79e-08!70;UBERON:0000466!9.94e-08!126;UBERON:0000490!2.14e-07!138;UBERON:0006554!2.85e-07!44;UBERON:0004876!5.75e-07!20;UBERON:0001048!5.96e-07!168;UBERON:0000483!6.01e-07!309;UBERON:0003886!9.63e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.85e-07;30!UBERON:0001008;4.85e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,6.40e-16,199;UBERON:0003104,2.67e-13,160;UBERON:0009142,2.67e-13,160;UBERON:0009569,1.05e-11,112;UBERON:0003103,3.44e-11,68;UBERON:0003914,4.58e-10,117;UBERON:0005256,3.78e-09,122;UBERON:0007503,1.60e-08,78;UBERON:0006554,5.35e-08,47;UBERON:0001134,6.12e-08,62;UBERON:0002036,6.12e-08,62;UBERON:0003082,6.12e-08,62;UBERON:0002385,1.64e-07,64;UBERON:0001015,1.64e-07,64;UBERON:0000383,1.64e-07,64;UBERON:0002113,2.03e-07,26;UBERON:0003918,2.03e-07,26;UBERON:0011143,2.03e-07,26;UBERON:0005095,2.03e-07,26;UBERON:0007687,2.03e-07,26;UBERON:0000486,2.26e-07,83;UBERON:0000483,2.30e-07,306;UBERON:0001008,2.51e-07,48;UBERON:0002329,3.12e-07,71;UBERON:0003059,3.12e-07,71;UBERON:0007282,3.12e-07,71;UBERON:0004290,3.12e-07,71;UBERON:0009618,3.12e-07,71;UBERON:0007524,3.36e-07,73;UBERON:0000119,3.95e-07,309;UBERON:0003077,5.62e-07,72;UBERON:0007285,5.62e-07,72;UBERON:0001048,6.08e-07,160;UBERON:0005177,7.39e-07,101;UBERON:0006555,8.01e-07,16;UBERON:0004819,8.01e-07,16;UBERON:0000490,8.35e-07,148;UBERON:0004810,9.85e-07,10 | |||
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| |||
|short_description=p1@TRPT1 | |||
}} |
Revision as of 08:21, 11 January 2014
Short description: | p1@TRPT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRPT1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000317459, ENST00000394547, ENST00000537907, ENST00000539595, ENST00000542040, ENST00000545812_5end |
EntrezGene: | TRPT1 |
HGNC: | 20316 |
UniProt: | Q86TN4F5H8A0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.15e-10 | 32 |
smooth muscle cell | 5.52e-09 | 43 |
smooth muscle myoblast | 5.52e-09 | 43 |
embryonic cell | 1.16e-07 | 250 |
kidney cell | 5.29e-07 | 17 |
kidney epithelial cell | 5.29e-07 | 17 |
electrically responsive cell | 6.51e-07 | 61 |
electrically active cell | 6.51e-07 | 61 |
muscle cell | 7.57e-07 | 55 |
kidney tubule cell | 9.85e-07 | 10 |
nephron tubule epithelial cell | 9.85e-07 | 10 |