FFCP PHASE1:Hg19::chr11:69061636..69061648,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7563 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000540760_5end | |||
|coexpression_cluster_id=C2158 | |||
|description=CAGE_peak_3_at_MYEOV_5end | |||
|id=chr11:69061636..69061648,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.36e-16!254 | |||
|ontology_enrichment_celltype_v019=CL:1000497;6.11e-09;17!CL:0002518;6.11e-09;17!CL:1000507;1.02e-08;10!CL:1000494;1.02e-08;10!CL:0000239;3.47e-08;3!CL:1000615;3.47e-08;3!CL:0002306;3.47e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.07e-15,253;CL:1000497,5.19e-09,17;CL:0002518,5.19e-09,17;CL:1000507,8.14e-09,10;CL:1000494,8.14e-09,10;CL:0000239,3.09e-08,3;CL:1000615,3.09e-08,3;CL:0002306,3.09e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0001041;1.04e-07;30 | |||
|ontology_enrichment_disease=DOID:0050687!1.66e-21!143;DOID:305!2.00e-21!106;DOID:1749!7.26e-14!14;DOID:162!5.24e-13!235;DOID:14566!2.82e-12!239;DOID:299!2.90e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:299;5.79e-16;25!DOID:1749;5.63e-15;14!DOID:3908;1.62e-09;5!DOID:1324;1.61e-08;15!DOID:0050615;6.42e-08;16!DOID:4929;2.14e-07;2!DOID:0050687;2.25e-07;143!DOID:3910;7.72e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.35e-28,106;DOID:0050687,5.10e-27,143;DOID:162,2.01e-18,235;DOID:14566,8.90e-18,239;DOID:299,4.98e-16,25;DOID:1749,5.99e-15,14;DOID:3908,1.62e-09,5;DOID:1324,1.72e-08,15;DOID:0050615,6.84e-08,16;DOID:4929,2.21e-07,2;DOID:3910,7.41e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.27e-10!169;UBERON:0000925!5.27e-10!169;UBERON:0006595!5.27e-10!169;UBERON:0001007!2.12e-09!155;UBERON:0001555!2.12e-09!155;UBERON:0007026!2.12e-09!155;UBERON:0000077!2.17e-07!130;UBERON:0005177!3.45e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002294;2.87e-10;7!UBERON:0001173;2.87e-10;7!UBERON:0001264;4.36e-10;10!UBERON:0002075;7.10e-09;18!UBERON:0004211;1.02e-08;10!UBERON:0009773;1.02e-08;10!UBERON:0001231;1.02e-08;10!UBERON:0004810;1.02e-08;10!UBERON:0006853;3.47e-08;3!UBERON:0007685;3.47e-08;3!UBERON:0004134;3.47e-08;3!UBERON:0002394;1.25e-07;4!UBERON:0003928;1.25e-07;4!UBERON:0000058;2.20e-07;10!UBERON:0002346;2.89e-07;4!UBERON:0000923;2.89e-07;4!UBERON:0010316;2.89e-07;4!UBERON:0005291;2.89e-07;4!UBERON:0004903;7.72e-07;2!UBERON:0002173;7.72e-07;2!UBERON:0002186;7.72e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002294,8.55e-11,9;UBERON:0001173,8.55e-11,9;UBERON:0004912,8.55e-11,9;UBERON:0005177,1.02e-10,101;UBERON:0001264,3.26e-10,10;UBERON:0002075,6.35e-09,18;UBERON:0004810,8.14e-09,10;UBERON:0006853,3.09e-08,3;UBERON:0007685,3.09e-08,3;UBERON:0004134,3.09e-08,3;UBERON:0002394,4.17e-08,6;UBERON:0003928,4.17e-08,6;UBERON:0005911,1.73e-07,82;UBERON:0004903,7.41e-07,2;UBERON:0002173,7.41e-07,2;UBERON:0002186,7.41e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0.694281003215189,0,0,0,0,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0.277064115484183,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0.16798212819886,1.13420077793909,0.0895585227028483,0,0.766765358330422,0,0,0.207328115540772,0.144119953416961,0.12624243342638,0,0,0,3.4214489204541,0.308482478109971,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0.736647911487171,0,0.364182336013434,0,3.60959690325929,1.92538342761037,0,1.46139224653261,0.73886140225013,0,0,0,0,0,0,1.27438136522519,1.66215201785745,1.56712328305525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.2023155617111,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0.213648142254946,0,1.47024129588619,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,1.12284324244932,4.68826173670061,0,0,5.96685908293468,1.43246690842614,0,0,0,0,0.111308705022906,0,0.422250816255987,0,0,0,0,0,0.311039587661807,11.6828856491525,10.2042069565097,0,0,0,0,0,0,0,0,0,2.17499872630438,1.593108275997,4.57656570526979,0,0,2.04123229368278,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0.359030577639089,0,0,0,0,0,0,0,3.38393490925771,2.94093801476609,4.36336126137191,1.3282761290693,0,3.79796516150449,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9566461893209,0,0,0,0,0,0,0,16.6163468176796,4.96487933813248,9.41798755221676,4.77889719091835,7.6844577428044,0,1.04135843001079,12.445034471626,0,0.52418000472609,10.1471759158254,0,0,0,0.872901148395775,0,0,0,0,0,1.17330829640882,2.00397050628834,0,0.39961921916426,2.4495370916198,0,0,3.45731515171559,0.49701014226173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,3.93709926058995,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,2.00640639386872,0,8.0604382874167,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0,0.879313402068495,0,0,0,3.07956308191793,5.63852017853338,0,0,0,0,0.197611631897944,0,4.46838880439127,5.98419583706421,7.520696820681,9.19036730290385,3.27872630709804,0,0,0,0,0,0,0,0,0,0.758245587708239,0,5.41111385305795,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,4.40030541129469,0,0,0,0.770479321629213,0,0,0,0,3.67105056759701,0,0,0,0,0,0,0.256241518587947,0.345430341731199,0,0,0,0,0,0,1.96618327002975,7.39592431755195,0,0,0,0,1.47284760201473,0,0,0,0,31.4531883711793,0,0.169732529954025,1.06287460050841,16.6073924107063,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,1.06172751012966,0.550285795565037,0.115525666150338,0,0,0,0,0.40341013740704,0,0,1.80149109261106,16.1163133976579,0,0,0,0,0,0,0,64.8964891687,0.894336993477167,0,0,0,0,0,0,0.171488009437418,0,0,4.13678443093889,3.67063626243828,0,0,0.560544326627578,0,11.2282347433683,33.9203698399806,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0.860454717640555,0,0,0,0,1.86123831398592,0,0.447421727191169,11.9743285010596,0.365753774946808,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,17.3197320447488,7.76368717774522,5.69713703493095,0,0,0,0,0,0,0.5290268405154,0,0,0,0.252332849670158,0,0,0,0,0.0918948995348449,0,0,0,0,0,1.27940389140589,0,0,0,0.672791175483681,0,0,0,0.342233301085281,0.740872583160463,0.430333232356058,0,0,1.06727345877715,0,30.2710931099198,0,0.244482888365733,0,0.665756774185513,0,0.641136984606466 | |||
|short_description=p3@MYEOV | |||
}} |
Revision as of 09:06, 11 January 2014
Short description: | p3@MYEOV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYEOV_5end |
Coexpression cluster: | C2158_peripheral_renal_neuroblastoma_tubular_squamous_neuroectodermal_epidermoid |
Association with transcript: | 0bp_to_ENST00000540760_5end |
EntrezGene: | MYEOV |
HGNC: | 7563 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.07e-15 | 253 |
kidney cell | 5.19e-09 | 17 |
kidney epithelial cell | 5.19e-09 | 17 |
kidney tubule cell | 8.14e-09 | 10 |
nephron tubule epithelial cell | 8.14e-09 | 10 |
brush border epithelial cell | 3.09e-08 | 3 |
kidney cortex tubule cell | 3.09e-08 | 3 |
epithelial cell of proximal tubule | 3.09e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
biliary system | 8.55e-11 | 9 |
biliary tree | 8.55e-11 | 9 |
biliary bud | 8.55e-11 | 9 |
trunk region element | 1.02e-10 | 101 |
pancreas | 3.26e-10 | 10 |
viscus | 6.35e-09 | 18 |
nephron tubule epithelium | 8.14e-09 | 10 |
renal cortex tubule | 3.09e-08 | 3 |
region of nephron tubule | 3.09e-08 | 3 |
proximal tubule | 3.09e-08 | 3 |
bile duct | 4.17e-08 | 6 |
digestive system duct | 4.17e-08 | 6 |
endo-epithelium | 1.73e-07 | 82 |
bronchoalveolar duct junction | 7.41e-07 | 2 |
alveolar duct | 7.41e-07 | 2 |
bronchiole | 7.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.35e-28 | 106 |
cell type cancer | 5.10e-27 | 143 |
cancer | 2.01e-18 | 235 |
disease of cellular proliferation | 8.90e-18 | 239 |
adenocarcinoma | 4.98e-16 | 25 |
squamous cell carcinoma | 5.99e-15 | 14 |
non-small cell lung carcinoma | 1.62e-09 | 5 |
lung cancer | 1.72e-08 | 15 |
respiratory system cancer | 6.84e-08 | 16 |
tubular adenocarcinoma | 2.21e-07 | 2 |
lung adenocarcinoma | 7.41e-07 | 2 |