FFCP PHASE1:Hg19::chr14:23857002..23857008,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_at_chr14:23857002..23857008,- | |||
|id=chr14:23857002..23857008,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;9.91e-41;1!UBERON:0005062;4.05e-40;4!UBERON:0007284;4.05e-40;4 | |||
|ontology_enrichment_disease=DOID:114!1.56e-34!2;DOID:178!4.44e-18!1;DOID:326!4.44e-18!1;DOID:3978!4.44e-18!1;DOID:3394!4.44e-18!1;DOID:5844!4.44e-18!1;DOID:1287!8.04e-18!4 | |||
|ontology_enrichment_disease_v019=DOID:114;2.34e-79;2!DOID:178;2.21e-40;1!DOID:326;2.21e-40;1!DOID:3978;2.21e-40;1!DOID:3394;2.21e-40;1!DOID:5844;2.21e-40;1!DOID:1287;2.22e-40;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.34e-79,2;DOID:178,2.21e-40,1;DOID:326,2.21e-40,1;DOID:3978,2.21e-40,1;DOID:3394,2.21e-40,1;DOID:5844,2.21e-40,1;DOID:1287,2.22e-40,4 | |||
|ontology_enrichment_uberon=UBERON:0003978!2.23e-50!3;UBERON:0009751!2.23e-50!3;UBERON:0000946!2.23e-50!3;UBERON:0002523!2.23e-50!3;UBERON:0005983!2.23e-50!3;UBERON:0002165!2.23e-50!3;UBERON:0002062!2.23e-50!3;UBERON:0007280!2.23e-50!3;UBERON:0007100!8.40e-39!27;UBERON:0002081!2.59e-34!2;UBERON:0002133!3.06e-34!2;UBERON:0004151!2.94e-23!3;UBERON:0002079!3.16e-18!1;UBERON:0002135!3.75e-18!1;UBERON:0002146!5.26e-18!1;UBERON:0005623!5.26e-18!1;UBERON:0002134!6.23e-18!1;UBERON:0005208!6.23e-18!1;UBERON:0005946!6.23e-18!1;UBERON:0005965!6.23e-18!1;UBERON:0002078!6.23e-18!1;UBERON:0005418!7.37e-18!1;UBERON:0001389!7.37e-18!1;UBERON:0000026!7.37e-18!1;UBERON:0008784!7.37e-18!1;UBERON:0006058!7.37e-18!1;UBERON:0003663!7.37e-18!1;UBERON:0001383!7.37e-18!1;UBERON:0004256!7.37e-18!1;UBERON:0002529!7.37e-18!1;UBERON:0004708!7.37e-18!1;UBERON:0002101!7.37e-18!1;UBERON:0004709!7.37e-18!1;UBERON:0003661!7.37e-18!1;UBERON:0002471!7.37e-18!1;UBERON:0004357!7.37e-18!1;UBERON:0009872!7.37e-18!1;UBERON:0004347!7.37e-18!1;UBERON:0005420!7.37e-18!1;UBERON:0005732!7.37e-18!1;UBERON:0006057!7.37e-18!1;UBERON:0000978!7.37e-18!1;UBERON:0002103!7.37e-18!1;UBERON:0001665!7.37e-18!1;UBERON:0003823!7.37e-18!1;UBERON:0000154!7.37e-18!1;UBERON:0005733!7.37e-18!1;UBERON:0005730!7.37e-18!1;UBERON:0000948!2.07e-17!24;UBERON:0005498!2.07e-17!24;UBERON:0004140!2.07e-17!24;UBERON:0009881!2.07e-17!24;UBERON:0004141!2.07e-17!24;UBERON:0003084!2.07e-17!24;UBERON:0007005!2.07e-17!24;UBERON:0004139!2.07e-17!24;UBERON:0004291!2.07e-17!24;UBERON:0003103!6.45e-15!69;UBERON:0002342!2.28e-11!14;UBERON:0005062!2.28e-11!14;UBERON:0001009!3.12e-11!113;UBERON:0007023!4.91e-11!115;UBERON:0001630!1.33e-09!2;UBERON:0005090!1.33e-09!2;UBERON:0004872!6.49e-07!84;UBERON:0004145!7.70e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;4.89e-53;3!UBERON:0000946;4.89e-53;3!UBERON:0002079;9.91e-41;1!UBERON:0002135;1.48e-40;1!UBERON:0002146;3.30e-40;1!UBERON:0005623;3.30e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0002081;3.81e-21;2!UBERON:0002133;4.66e-21;2!UBERON:0000948;5.72e-17;22!UBERON:0010313;8.81e-17;10!UBERON:0004151;1.40e-14;3!UBERON:0003103;1.00e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,4.89e-53,3;UBERON:0009751,4.89e-53,3;UBERON:0000946,4.89e-53,3;UBERON:0002523,4.89e-53,3;UBERON:0005983,4.89e-53,3;UBERON:0002165,4.89e-53,3;UBERON:0002062,4.89e-53,3;UBERON:0007280,4.89e-53,3;UBERON:0002079,9.91e-41,1;UBERON:0002135,1.48e-40,1;UBERON:0002146,3.30e-40,1;UBERON:0005623,3.30e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0004797,1.80e-23,7;UBERON:0002081,3.81e-21,2;UBERON:0010227,3.81e-21,2;UBERON:0002133,4.66e-21,2;UBERON:0010313,8.81e-17,10;UBERON:0002342,8.81e-17,10;UBERON:0005062,8.81e-17,10;UBERON:0000948,1.25e-15,24;UBERON:0005498,1.25e-15,24;UBERON:0004140,1.25e-15,24;UBERON:0009881,1.25e-15,24;UBERON:0004141,1.25e-15,24;UBERON:0003084,1.25e-15,24;UBERON:0007005,1.25e-15,24;UBERON:0004139,1.25e-15,24;UBERON:0004291,1.25e-15,24;UBERON:0003103,3.48e-15,68;UBERON:0004151,1.40e-14,3;UBERON:0001009,1.80e-09,112;UBERON:0007023,2.58e-09,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.74780082162832,1.14580212005842,0.717873024576814,3.99358000997982,9.87219910714113,0.446342914883745,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.14695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr14:23857002..23857008,- | |||
}} |
Revision as of 19:17, 11 January 2014
Short description: | p@chr14:23857002..23857008, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:23857002..23857008, - |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 4.89e-53 | 3 |
cardiac mesenchyme | 4.89e-53 | 3 |
cardial valve | 4.89e-53 | 3 |
tunica intima | 4.89e-53 | 3 |
heart layer | 4.89e-53 | 3 |
endocardium | 4.89e-53 | 3 |
endocardial cushion | 4.89e-53 | 3 |
presumptive endocardium | 4.89e-53 | 3 |
left cardiac atrium | 9.91e-41 | 1 |
mitral valve | 1.48e-40 | 1 |
pulmonary valve | 3.30e-40 | 1 |
semi-lunar valve | 3.30e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
blood vessel layer | 1.80e-23 | 7 |
cardiac atrium | 3.81e-21 | 2 |
future cardiac atrium | 3.81e-21 | 2 |
atrioventricular valve | 4.66e-21 | 2 |
neural crest-derived structure | 8.81e-17 | 10 |
neural crest | 8.81e-17 | 10 |
neural fold | 8.81e-17 | 10 |
heart | 1.25e-15 | 24 |
primitive heart tube | 1.25e-15 | 24 |
primary heart field | 1.25e-15 | 24 |
anterior lateral plate mesoderm | 1.25e-15 | 24 |
heart tube | 1.25e-15 | 24 |
heart primordium | 1.25e-15 | 24 |
cardiac mesoderm | 1.25e-15 | 24 |
cardiogenic plate | 1.25e-15 | 24 |
heart rudiment | 1.25e-15 | 24 |
compound organ | 3.48e-15 | 68 |
cardiac chamber | 1.40e-14 | 3 |
circulatory system | 1.80e-09 | 112 |
adult organism | 2.58e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.34e-79 | 2 |
vascular disease | 2.21e-40 | 1 |
ischemia | 2.21e-40 | 1 |
extrinsic cardiomyopathy | 2.21e-40 | 1 |
myocardial ischemia | 2.21e-40 | 1 |
myocardial infarction | 2.21e-40 | 1 |
cardiovascular system disease | 2.22e-40 | 4 |