FFCP PHASE1:Hg19::chr15:93447640..93447656,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100422995 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=38299 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=11bp_to_NR_036136_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_MIR3175_5end | |||
|id=chr15:93447640..93447656,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.89e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0002591;5.16e-21;1!CL:0000094;6.28e-11;8!CL:0000081;3.37e-08;11!CL:0000775;5.18e-08;3!CL:0000767;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.43e-21,1;CL:0000094,5.98e-11,8;CL:0000081,3.25e-08,11;CL:0000775,5.18e-08,3;CL:0000767,6.34e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.75e-09;10!UBERON:0005564;4.75e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001897;3.34e-11;2!UBERON:0000078;3.34e-11;2!UBERON:0002012;3.34e-11;2!UBERON:0010225;3.34e-11;2!UBERON:0008886;3.34e-11;2!UBERON:0000473;4.43e-11;8!UBERON:0003135;2.62e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001897,2.73e-11,2;UBERON:0010225,2.73e-11,2;UBERON:0000473,4.43e-11,8;UBERON:0000078,4.52e-11,2;UBERON:0007497,4.52e-11,2;UBERON:0003643,4.52e-11,2;UBERON:0003504,4.52e-11,2;UBERON:0003469,4.52e-11,2;UBERON:0003496,4.52e-11,2;UBERON:0002012,4.52e-11,2;UBERON:0008886,4.52e-11,2;UBERON:0007303,4.52e-11,2;UBERON:0002061,4.52e-11,2;UBERON:0005432,4.52e-11,2;UBERON:0004363,4.52e-11,2;UBERON:0003135,2.62e-08,11;UBERON:0004145,8.29e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,1.57345710739562,0.383829398097213,0.309632246632152,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0,0.645484683583826,1.35426486594342,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0.546138611262131,0.889509253863555,0,0,0.574752439954483,0,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0.167186495390678,0,0,1.94826728407911,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0.296573126324121,0,0,0.226618685395132,0,0.68725489096526,0.506039384039006,0,0,0,0,0,0,0.236777252044017,0,0,0,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0,0,0,0,1.30979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.864719720501769,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,2.99161459204025,0.828831026872071,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0.213425530045242,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0.179515288819544,0.108647371922008,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0.182454789215666,0.19566461893209,0,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0.106787412567695,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0.0642292250964595,0,0,0,0,0,0.322951291263702,0,0.196295437002051,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.270150338473579,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156986185701028,0,0.280272163313789,0,0,0,0.0714765441766563,0.316027223465453,0,0,0,0,0,0,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0.240724100067505,0.730336388246517,0,0.143339583151451,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0,0,3.56159881625725,5.62724673327975,1.65833887891756,0,0,0,0.0645889098360061,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0.320568492303233 | |||
|short_description=p1@MIR3175 | |||
}} |
Revision as of 01:23, 12 January 2014
Short description: | p1@MIR3175 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR3175_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 11bp_to_NR_036136_5end |
EntrezGene: | MIR3175 |
HGNC: | 38299 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.43e-21 | 1 |
granulocyte | 5.98e-11 | 8 |
blood cell | 3.25e-08 | 11 |
neutrophil | 5.18e-08 | 3 |
basophil | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dorsal plus ventral thalamus | 2.73e-11 | 2 |
thalamic complex | 2.73e-11 | 2 |
testis | 4.43e-11 | 8 |
mixed ectoderm/mesoderm/endoderm-derived structure | 4.52e-11 | 2 |
developing epithelial placode | 4.52e-11 | 2 |
respiratory system arterial blood vessel | 4.52e-11 | 2 |
respiratory system blood vessel | 4.52e-11 | 2 |
respiratory system artery | 4.52e-11 | 2 |
head blood vessel | 4.52e-11 | 2 |
pulmonary artery | 4.52e-11 | 2 |
pulmonary vascular system | 4.52e-11 | 2 |
pharyngeal vasculature | 4.52e-11 | 2 |
truncus arteriosus | 4.52e-11 | 2 |
aortic sac | 4.52e-11 | 2 |
pharyngeal arch artery | 4.52e-11 | 2 |
male reproductive organ | 2.62e-08 | 11 |
outflow tract | 8.29e-08 | 3 |