FFCP PHASE1:Hg19::chr18:21485515..21485536,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21485515..21485536,- | |||
|id=chr18:21485515..21485536,- | |||
|ontology_enrichment_celltype=CL:0002076!5.44e-19!43;CL:0000066!7.01e-15!254;CL:0002368!3.24e-13!13;CL:0002621!7.75e-13!3;CL:0000223!8.37e-13!59;CL:0002327!8.10e-10!4;CL:0002536!1.18e-08!2;CL:0002159!1.32e-07!13;CL:0002537!2.66e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002327;1.22e-17;4!CL:0000312;3.04e-14;5!CL:0000240;4.94e-12;6!CL:0000311;4.94e-12;6!CL:0000079;4.94e-12;6!CL:0000237;4.94e-12;6!CL:0002159;2.45e-11;14!CL:0000362;2.51e-08;9!CL:0002541;6.69e-07;3!CL:0002166;6.69e-07;3!CL:0002577;9.11e-07;3!CL:0002231;9.11e-07;3!CL:0002621;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.33e-17,4;CL:0000312,2.76e-14,5;CL:0000240,4.55e-12,6;CL:0000311,4.55e-12,6;CL:0000079,4.55e-12,6;CL:0000237,4.55e-12,6;CL:0000036,4.55e-12,6;CL:0000357,4.55e-12,6;CL:0000114,4.55e-12,6;CL:0002159,2.20e-11,14;CL:0000362,2.37e-08,9;CL:0002166,6.14e-07,3;CL:0002541,6.50e-07,3;CL:0002621,7.70e-07,3;CL:0002577,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;4.94e-12;6!CL:0000114;4.94e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.92e-25!14;UBERON:0000158!2.92e-25!14;UBERON:0000478!6.79e-14!24;UBERON:0003124!1.50e-13!7;UBERON:0000305!2.28e-13!7;UBERON:0001949!7.75e-13!3;UBERON:0004871!1.16e-11!8;UBERON:0001911!8.10e-10!4;UBERON:0005333!8.10e-10!4;UBERON:0008425!8.10e-10!4;UBERON:0005311!8.10e-10!4;UBERON:0004119!1.82e-09!169;UBERON:0000925!1.82e-09!169;UBERON:0006595!1.82e-09!169;UBERON:0001987!4.37e-09!4;UBERON:0004340!4.37e-09!4;UBERON:0004923!2.76e-08!57;UBERON:0000365!2.00e-07!5;UBERON:0001004!4.78e-07!72 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;1.22e-17;4!UBERON:0003124;6.69e-07;3!UBERON:0000920;6.69e-07;3!UBERON:0001949;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,1.33e-17,4;UBERON:0005333,1.33e-17,4;UBERON:0008425,1.33e-17,4;UBERON:0005311,1.33e-17,4;UBERON:0003124,1.77e-10,7;UBERON:0000076,2.77e-09,8;UBERON:0000920,6.50e-07,3;UBERON:0001949,7.70e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,0.818238361772504,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.08525542276389,0,1.3068766413512,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51973192298289,0.992425680696705,3.85101647622248,1.16253575405585,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.368323955743585,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,1.15699440752685,0.768760269460425,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0.443430153536676,2.06751060186264,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0.183195186803725,2.13213910407454,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr18:21485515..21485536,- | |||
}} |
Revision as of 18:48, 20 January 2014
Short description: | p@chr18:21485515..21485536, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:21485515..21485536, - |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.33e-17 | 4 |
keratinocyte | 2.76e-14 | 5 |
stratified squamous epithelial cell | 4.55e-12 | 6 |
keratin accumulating cell | 4.55e-12 | 6 |
stratified epithelial cell | 4.55e-12 | 6 |
keratinizing barrier epithelial cell | 4.55e-12 | 6 |
epithelial fate stem cell | 4.55e-12 | 6 |
stratified epithelial stem cell | 4.55e-12 | 6 |
surface ectodermal cell | 4.55e-12 | 6 |
general ecto-epithelial cell | 2.20e-11 | 14 |
epidermal cell | 2.37e-08 | 9 |
epithelial cell of Malassez | 6.14e-07 | 3 |
chorionic membrane mesenchymal stem cell | 6.50e-07 | 3 |
gingival epithelial cell | 7.70e-07 | 3 |
placental epithelial cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 1.33e-17 | 4 |
mammary bud | 1.33e-17 | 4 |
mammary ridge | 1.33e-17 | 4 |
mammary placode | 1.33e-17 | 4 |
chorion | 1.77e-10 | 7 |
external ectoderm | 2.77e-09 | 8 |
egg chorion | 6.50e-07 | 3 |
gingival epithelium | 7.70e-07 | 3 |