FFCP PHASE1:Hg19::chr1:179560955..179560974,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=163589 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20614 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NAT2 | |||
|association_with_transcript=-14bp_to_NM_001199089_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_TDRD5_5end | |||
|id=chr1:179560955..179560974,+ | |||
|ontology_enrichment_celltype=CL:1000415!5.18e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.21e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.55e-13,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;5.15e-11;10!UBERON:0005564;5.15e-11;10 | |||
|ontology_enrichment_disease=DOID:5093!8.29e-08!4;DOID:1612!8.29e-08!4 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.80e-07;4!DOID:1612;1.80e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.80e-07,4;DOID:1612,1.80e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.86e-22!115;UBERON:0002780!9.54e-18!41;UBERON:0001890!9.54e-18!41;UBERON:0006240!9.54e-18!41;UBERON:0003080!3.16e-17!42;UBERON:0003056!2.01e-13!61;UBERON:0001049!3.19e-13!57;UBERON:0005068!3.19e-13!57;UBERON:0006241!3.19e-13!57;UBERON:0007135!3.19e-13!57;UBERON:0001893!9.79e-13!34;UBERON:0002616!1.26e-12!59;UBERON:0001869!8.30e-12!32;UBERON:0002791!2.80e-11!33;UBERON:0003075!2.38e-10!86;UBERON:0007284!2.38e-10!86;UBERON:0006947!2.83e-10!3;UBERON:0004054!2.83e-10!3;UBERON:0003135!5.44e-10!11;UBERON:0000955!5.92e-10!69;UBERON:0006238!5.92e-10!69;UBERON:0002346!1.15e-09!90;UBERON:0001950!2.20e-09!20;UBERON:0002020!2.93e-09!34;UBERON:0003528!2.93e-09!34;UBERON:0002619!2.01e-08!22;UBERON:0000153!3.69e-08!129;UBERON:0007811!3.69e-08!129;UBERON:0005743!4.16e-08!86;UBERON:0005904!8.68e-08!4;UBERON:0001017!9.86e-08!82;UBERON:0003296!1.09e-07!4;UBERON:0010133!1.09e-07!4;UBERON:0000007!2.08e-07!2;UBERON:0000369!2.11e-07!4;UBERON:0002435!2.11e-07!4;UBERON:0000204!2.11e-07!4;UBERON:0010082!2.11e-07!4;UBERON:0000956!2.89e-07!25;UBERON:0000203!2.89e-07!25;UBERON:0000033!3.05e-07!123;UBERON:0001894!4.42e-07!7;UBERON:0006222!4.42e-07!7;UBERON:0000481!5.99e-07!347;UBERON:0000073!6.12e-07!94;UBERON:0001016!6.12e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.61e-13;8!UBERON:0003135;4.22e-10;11!UBERON:0002110;1.53e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.61e-13,8;UBERON:0003135,4.22e-10,11;UBERON:0002110,1.81e-09,3;UBERON:0006242,1.81e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0.121360521749513,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0.349839999984783,0,0,0.254253650292766,1.89110145414349,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0,0,0,0,3.58536327342627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.265372693510018,0,0,0,0,0.067401132980677,0,0,0,0.391329237864179,0,0.394584402849391,1.20990716048664,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0,0,0,0,0,0.253243183823515,1.17330829640882,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0.244052529803926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0.739280431085226,0.202612753855184,0,0,0.19024743058172,0,0.548257766857182,0,0,0,0,0.336283722218824,0.606965604236632,0.91064876540519,0,0,0,0.747667062745149,0.0657727735628491,0.236387681767936,0,0,0.314231179832004,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0.68732060563215,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0.237840181555137,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,2.57647573942014,4.55539021265503,0,0.103432995861895,0,0,0.0645889098360061,0.124149428591716,0,0.190941474834495,0.202117188958219,0,0,0,0.0717222053926763,0,0,0.853818767021724,0,0,0,0,0,0,0,0 | |||
|short_description=p2@TDRD5 | |||
}} |
Revision as of 22:30, 10 January 2014
Short description: | p2@TDRD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TDRD5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -14bp_to_NM_001199089_5end |
EntrezGene: | TDRD5 |
HGNC: | 20614 |
UniProt: | Q8NAT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 1.61e-13 | 8 |
male reproductive organ | 4.22e-10 | 11 |
gallbladder | 1.81e-09 | 3 |
gall bladder primordium | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.80e-07 | 4 |
breast cancer | 1.80e-07 | 4 |