FFCP PHASE1:Hg19::chr1:54801538..54801563,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23648 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15674 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000528787_5end | |||
|description=CAGE_peak_2_at_SSBP3_5end | |||
|id=chr1:54801538..54801563,- | |||
|ontology_enrichment_celltype=CL:0000055!3.66e-35!180;CL:0000680!1.31e-20!57;CL:0000056!1.31e-20!57;CL:0000355!1.31e-20!57;CL:0000183!2.02e-20!59;CL:0000187!2.57e-19!54;CL:0000222!7.15e-18!119;CL:0000192!1.08e-16!42;CL:0000514!1.08e-16!42;CL:0000057!1.54e-16!75;CL:0000220!4.76e-15!246;CL:0000393!6.81e-15!60;CL:0000211!6.81e-15!60;CL:0002321!1.71e-14!248;CL:0000359!1.40e-12!32;CL:0002371!5.12e-10!591;CL:0000144!9.56e-09!625;CL:0002620!5.60e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.78e-14;43!CL:0000359;3.98e-13;32!CL:0000187;6.66e-12;55!CL:0000393;4.12e-09;61!CL:0000211;4.12e-09;61!CL:0002620;2.38e-07;23!CL:0000057;2.46e-07;73!CL:0000134;3.28e-07;55!CL:0002320;8.69e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,2.18e-23,58;CL:0000056,2.18e-23,58;CL:0000355,2.18e-23,58;CL:0000187,6.16e-22,55;CL:0000192,7.26e-19,43;CL:0000514,7.26e-19,43;CL:0000393,1.31e-17,61;CL:0000211,1.31e-17,61;CL:0000057,2.28e-17,76;CL:0000222,4.95e-14,121;CL:0000359,5.36e-14,32;CL:0002321,2.31e-12,250;CL:0000723,2.10e-07,433;CL:0002620,3.78e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.78e-14;43!CL:0000355;2.98e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.25e-24!83;UBERON:0002329!1.25e-24!83;UBERON:0003077!1.25e-24!83;UBERON:0003059!1.25e-24!83;UBERON:0007282!1.25e-24!83;UBERON:0009618!1.25e-24!83;UBERON:0007285!1.25e-24!83;UBERON:0004290!1.37e-22!70;UBERON:0000486!1.58e-20!82;UBERON:0005256!2.73e-20!143;UBERON:0002385!1.78e-19!63;UBERON:0001015!1.78e-19!63;UBERON:0000383!1.78e-19!63;UBERON:0001134!3.57e-19!61;UBERON:0002036!3.57e-19!61;UBERON:0003082!3.57e-19!61;UBERON:0000475!1.61e-17!365;UBERON:0002100!4.77e-15!216;UBERON:0003102!3.11e-14!95;UBERON:0000481!8.87e-13!347;UBERON:0003104!9.20e-13!238;UBERON:0009142!9.20e-13!238;UBERON:0002049!1.30e-12!79;UBERON:0007798!1.30e-12!79;UBERON:0004872!7.51e-12!84;UBERON:0000119!1.06e-11!312;UBERON:0001637!1.65e-11!42;UBERON:0003509!1.65e-11!42;UBERON:0004572!1.65e-11!42;UBERON:0000483!3.65e-11!309;UBERON:0000490!4.37e-11!138;UBERON:0001981!5.23e-11!60;UBERON:0007500!5.23e-11!60;UBERON:0004537!5.23e-11!60;UBERON:0006965!5.23e-11!60;UBERON:0003914!8.54e-11!118;UBERON:0000055!3.15e-10!69;UBERON:0004573!9.90e-10!33;UBERON:0004571!9.90e-10!33;UBERON:0002199!2.14e-09!45;UBERON:0002416!2.14e-09!45;UBERON:0001009!5.29e-09!113;UBERON:0004535!5.81e-09!110;UBERON:0002097!3.24e-08!40;UBERON:0001444!1.22e-07!48;UBERON:0003103!2.79e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.16e-08;31!UBERON:0001015;2.16e-08;31!UBERON:0000383;2.16e-08;31!UBERON:0004573;3.07e-08;33!UBERON:0004571;3.07e-08;33!UBERON:0003102;5.45e-08;50!UBERON:0001637;2.84e-07;42!UBERON:0003509;2.84e-07;42!UBERON:0004572;2.84e-07;42!UBERON:0002384;4.58e-07;198!UBERON:0002199;4.61e-07;46!UBERON:0002416;4.61e-07;46!UBERON:0002204;4.67e-07;70!UBERON:0002097;6.88e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.30e-26,78;UBERON:0002329,7.42e-26,71;UBERON:0003059,7.42e-26,71;UBERON:0007282,7.42e-26,71;UBERON:0004290,7.42e-26,71;UBERON:0009618,7.42e-26,71;UBERON:0003077,4.21e-25,72;UBERON:0007285,4.21e-25,72;UBERON:0007524,5.37e-25,73;UBERON:0000486,3.56e-24,83;UBERON:0001134,5.12e-22,62;UBERON:0002036,5.12e-22,62;UBERON:0003082,5.12e-22,62;UBERON:0002385,8.68e-22,64;UBERON:0001015,8.68e-22,64;UBERON:0000383,8.68e-22,64;UBERON:0003104,1.32e-18,160;UBERON:0009142,1.32e-18,160;UBERON:0005256,5.81e-18,122;UBERON:0003102,6.21e-15,99;UBERON:0002100,6.68e-12,199;UBERON:0000490,1.09e-11,148;UBERON:0001637,1.61e-10,42;UBERON:0003509,1.61e-10,42;UBERON:0004572,1.61e-10,42;UBERON:0002199,5.45e-10,46;UBERON:0002416,5.45e-10,46;UBERON:0004573,2.08e-09,33;UBERON:0004571,2.08e-09,33;UBERON:0002049,4.65e-09,78;UBERON:0007798,4.65e-09,78;UBERON:0004872,7.12e-09,83;UBERON:0002097,1.10e-08,41;UBERON:0000119,1.44e-08,309;UBERON:0003914,1.88e-08,117;UBERON:0007500,3.76e-08,59;UBERON:0001981,3.76e-08,59;UBERON:0004537,3.76e-08,59;UBERON:0006965,3.76e-08,59;UBERON:0000483,4.36e-08,306;UBERON:0001444,3.09e-07,49;UBERON:0000926,4.36e-07,315;UBERON:0004120,4.36e-07,315;UBERON:0006603,4.36e-07,315;UBERON:0004535,5.53e-07,109;UBERON:0000033,6.01e-07,56;UBERON:0000055,7.90e-07,68 | |||
|phase1_expression=2.90685406832891,1.71280419112787,1.83240725324762,3.00219895059391,0.893922188854576,0.872338524100369,2.53299878168311,4.42203911398782,3.65659879479774,4.42321085702716,4.18680700783456,0,0.263766978228454,9.0349437660834,5.96515276310248,0,3.01347264011988,1.46062018077475,3.41552959153355,0.492484232307152,1.83600622119828,0,0,0.547497700291537,0.376627918784408,0,0,0,0,0,0,6.43594857135249,11.7470308323518,14.0506523863379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68280343881454,2.30152611318355,4.3372698286148,3.00802746381534,8.40109809972778,2.3858578411533,6.8128881842369,1.60709189178915,1.99556457716308,1.40535657109002,1.63723844372141,13.8432209551166,12.977455497455,0,0,0,0,0,0,0.993812036833525,0.860234595106124,2.08284300964557,2.26123176769604,2.09749718104953,0.825354125820202,0.417989933073621,0,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0,0.367663080345869,0,0.535798369704479,0.22452937262617,0.563057402416611,0,0.949265659568129,0.549605231791222,0,0,3.92484646928281,6.46063537203914,4.30543739659571,2.91300197789081,3.44203944898576,8.86670955495893,1.68203280042692,4.2699598291882,1.97334038733728,4.04574346019696,3.50247747381189,2.28846664358842,3.32986340818849,2.88087962239999,6.09235722767871,6.55536161343673,6.27519003698894,8.07022874979726,6.92863541998213,3.23745888736263,5.47758146138769,8.57447519270552,4.66770405784718,11.6758132728615,0,3.21447008062124,26.3946794962028,13.6537446945085,3.36672227908132,6.00568895385428,10.528436388399,2.63386572528503,3.98434134538726,3.00476117813194,2.26864366320042,2.33206526395521,3.84403299873421,3.17897851739343,3.00091096084402,7.31672957592916,1.54584324027377,2.97786970130544,2.36286865137773,3.50773218580315,3.28163906517349,5.61504381718026,7.11242650002772,1.42003837006646,2.11579406278045,3.39121184620975,3.86521706326594,2.45471508531751,3.72845974005705,0,0,0,0,0,0,3.12899064659632,2.57296375277154,5.52539685409922,2.3218396401599,7.94067429836544,0,0,0,0,0,0,0,0,0,1.4763109092493,5.60967095213783,2.4694440679884,0,0,0,0,0,0,3.43135620597051,14.4870376739386,16.8602629886429,16.0846355858609,4.90718759340207,3.9096996637239,9.35941306751621,0,0.115930404975077,1.76113041353732,0.577465791044295,0.462985512576611,0,0,0,0,0,0,2.81201501960331,1.00789276919316,0.850650583454319,1.16426079513703,0,0,0,0,0,0,0.12624243342638,2.85740524314761,6.11181480893244,5.86087236050235,3.4214489204541,1.64523988325318,3.00343057843917,1.71495859578347,6.16720963899484,1.30788020649984,3.74025257686845,2.06834745212444,17.8828222925941,4.22651376278,2.39344304926383,4.16029747645464,6.43018435655355,1.41849132023278,5.86128793835419,7.86378965119812,7.05408087008876,4.11620168390384,2.93162565864362,5.33087923113819,6.33561498346743,4.82303003295338,5.22920075160176,3.499054691372,0,0,0,2.63587341040741,2.29723871668228,4.27910715122155,3.4747513600219,5.75333703141074,10.0274139414342,0,0,0,0,0,0,0,0,0,0,0,0,7.85225547002495,7.00238729483548,5.69656549769445,0.415941723061614,3.56857977594324,4.25796520591624,0.234282829985426,10.8340595901979,11.3703752027992,5.17365356462525,3.98535359121262,3.87175253937577,5.03924963914881,8.02784745597236,2.05886054286514,0,0,0,0.303127571446259,0,0,3.96972492510043,0.61384789315225,1.12264037773229,2.81906128362542,1.53512174720011,0.965123526861645,5.93672265779964,3.85524234506639,4.26148140751505,6.98080826117378,4.67328986265259,5.34567740915813,0,1.40354529212299,0.644566922551274,4.36294903025506,3.82391452814106,6.55622074797121,4.51199612907412,2.15642943892361,3.92174884588428,2.92278449306521,2.53323909342902,1.13733384070897,1.02056223165909,1.0795795805107,1.54227252690289,4.06419656315779,4.51520796469368,2.03901018436031,0.831076008928724,5.82074362277664,0,0,5.64190275256056,6.56029291399411,11.0628654185863,0.721287081534056,0.366277859273374,0.247528499761764,17.8022316778813,14.95138565884,3.21367859688319,10.0537547023807,4.31336127921004,5.98664331431905,3.99726060205139,6.98231591643779,4.64053420525531,4.60223788046945,2.67096106940212,4.13212288402445,6.1500821556834,2.29702882490251,3.33820676823315,16.269594225405,2.83331112147576,9.7585217822484,9.54904098545875,12.7753447276085,6.95946393660058,6.30102344953328,2.28999818787186,1.86079184679834,4.11293252134344,2.66882271493355,5.62975140884935,3.85145089230528,23.5470403465193,8.63443504219153,3.41757669408298,5.21620356498504,3.18093486333353,13.9505912285588,6.34041284692033,2.94880919367287,4.8763373908959,5.36169677188826,14.7910205459458,5.7329962791354,9.19135307699133,22.6016233240486,9.92457618383023,5.30751180192976,5.69986150829892,6.36653087693356,7.87073702455959,5.88440093191842,4.3375289733965,4.7888252430481,7.74421301901878,3.83171259951173,3.92338156629375,6.38569915327076,8.65541304720423,10.8667314676768,4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| |||
|short_description=p2@SSBP3 | |||
}} |
Revision as of 18:37, 10 January 2014
Short description: | p2@SSBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SSBP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528787_5end |
EntrezGene: | SSBP3 |
HGNC: | 15674 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.18e-23 | 58 |
myoblast | 2.18e-23 | 58 |
multi-potent skeletal muscle stem cell | 2.18e-23 | 58 |
muscle cell | 6.16e-22 | 55 |
smooth muscle cell | 7.26e-19 | 43 |
smooth muscle myoblast | 7.26e-19 | 43 |
electrically responsive cell | 1.31e-17 | 61 |
electrically active cell | 1.31e-17 | 61 |
fibroblast | 2.28e-17 | 76 |
mesodermal cell | 4.95e-14 | 121 |
vascular associated smooth muscle cell | 5.36e-14 | 32 |
embryonic cell | 2.31e-12 | 250 |
somatic stem cell | 2.10e-07 | 433 |
skin fibroblast | 3.78e-07 | 23 |