FFCP PHASE1:Hg19::chr2:152527650..152527659,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=4703 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7720 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=234bp_to_ENST00000484968_5end | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_20_at_NEB_5end | |||
|id=chr2:152527650..152527659,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008814;5.96e-34;2!UBERON:0010056;5.96e-34;2!UBERON:0003104;2.74e-09;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!5.41e-28!2;UBERON:0005090!5.41e-28!2;UBERON:0001723!5.06e-19!3;UBERON:0001033!5.06e-19!3;UBERON:0010056!5.06e-19!3;UBERON:0005418!6.22e-15!1;UBERON:0001389!6.22e-15!1;UBERON:0000026!6.22e-15!1;UBERON:0008784!6.22e-15!1;UBERON:0006058!6.22e-15!1;UBERON:0003663!6.22e-15!1;UBERON:0001383!6.22e-15!1;UBERON:0004256!6.22e-15!1;UBERON:0002529!6.22e-15!1;UBERON:0004708!6.22e-15!1;UBERON:0002101!6.22e-15!1;UBERON:0004709!6.22e-15!1;UBERON:0003661!6.22e-15!1;UBERON:0002471!6.22e-15!1;UBERON:0004357!6.22e-15!1;UBERON:0009872!6.22e-15!1;UBERON:0004347!6.22e-15!1;UBERON:0005420!6.22e-15!1;UBERON:0005732!6.22e-15!1;UBERON:0006057!6.22e-15!1;UBERON:0000978!6.22e-15!1;UBERON:0002103!6.22e-15!1;UBERON:0001665!6.22e-15!1;UBERON:0003823!6.22e-15!1;UBERON:0000154!6.22e-15!1;UBERON:0005733!6.22e-15!1;UBERON:0005730!6.22e-15!1;UBERON:0002426!7.13e-15!1;UBERON:0003831!7.13e-15!1;UBERON:0003898!7.13e-15!1;UBERON:0004830!7.13e-15!1;UBERON:0001774!7.13e-15!1;UBERON:0003830!7.13e-15!1;UBERON:0005175!7.13e-15!1;UBERON:0003897!7.13e-15!1;UBERON:0001103!7.13e-15!1;UBERON:0010084!7.13e-15!1;UBERON:0000989!9.36e-15!1;UBERON:0008811!9.36e-15!1;UBERON:0006258!9.36e-15!1;UBERON:0005876!9.36e-15!1;UBERON:0004874!9.36e-15!1;UBERON:0007029!1.07e-14!1;UBERON:0001301!1.41e-14!1;UBERON:0007190!2.75e-14!1;UBERON:0002372!3.15e-14!1;UBERON:0001961!3.15e-14!1;UBERON:0001744!3.15e-14!1;UBERON:0001735!3.15e-14!1;UBERON:0001042!1.33e-12!10;UBERON:0009145!1.33e-12!10;UBERON:0006562!1.64e-11!11;UBERON:0007023!2.13e-10!115;UBERON:0008814!1.23e-08!15;UBERON:0000341!5.74e-08!2;UBERON:0003127!8.04e-08!2;UBERON:0000078!3.05e-07!18;UBERON:0001557!6.91e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;3.34e-66;1!UBERON:0000026;3.34e-66;1!UBERON:0008784;3.34e-66;1!UBERON:0006058;3.34e-66;1!UBERON:0003663;3.34e-66;1!UBERON:0004256;3.34e-66;1!UBERON:0004708;3.34e-66;1!UBERON:0002101;3.34e-66;1!UBERON:0004709;3.34e-66;1!UBERON:0002529;3.34e-66;1!UBERON:0010538;3.34e-66;1!UBERON:0003661;3.34e-66;1!UBERON:0010890;3.34e-66;1!UBERON:0002471;3.34e-66;1!UBERON:0001383;3.34e-66;1!UBERON:0010758;3.34e-66;1!UBERON:0010707;3.34e-66;1!UBERON:0000978;3.34e-66;1!UBERON:0002103;3.34e-66;1!UBERON:0001665;3.34e-66;1!UBERON:0003823;3.34e-66;1!UBERON:0000154;3.34e-66;1!UBERON:0010709;3.34e-66;1!UBERON:0005090;5.96e-34;2!UBERON:0001630;5.96e-34;2!UBERON:0001723;3.66e-23;3!UBERON:0001033;3.66e-23;3!UBERON:0001134;1.33e-17;16!UBERON:0002036;1.33e-17;16!UBERON:0002385;6.09e-10;31!UBERON:0001015;6.09e-10;31!UBERON:0000383;6.09e-10;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.66e-66,1;UBERON:0001389,4.66e-66,1;UBERON:0000026,4.66e-66,1;UBERON:0008784,4.66e-66,1;UBERON:0006058,4.66e-66,1;UBERON:0003663,4.66e-66,1;UBERON:0004256,4.66e-66,1;UBERON:0004708,4.66e-66,1;UBERON:0002101,4.66e-66,1;UBERON:0004709,4.66e-66,1;UBERON:0002529,4.66e-66,1;UBERON:0010538,4.66e-66,1;UBERON:0003661,4.66e-66,1;UBERON:0010890,4.66e-66,1;UBERON:0002471,4.66e-66,1;UBERON:0001383,4.66e-66,1;UBERON:0004357,4.66e-66,1;UBERON:0004347,4.66e-66,1;UBERON:0005420,4.66e-66,1;UBERON:0005732,4.66e-66,1;UBERON:0010758,4.66e-66,1;UBERON:0010707,4.66e-66,1;UBERON:0000978,4.66e-66,1;UBERON:0002103,4.66e-66,1;UBERON:0001665,4.66e-66,1;UBERON:0003823,4.66e-66,1;UBERON:0000154,4.66e-66,1;UBERON:0010709,4.66e-66,1;UBERON:0005733,4.66e-66,1;UBERON:0005730,4.66e-66,1;UBERON:0005090,7.05e-34,2;UBERON:0001630,7.05e-34,2;UBERON:0001723,3.27e-23,3;UBERON:0001033,3.27e-23,3;UBERON:0010056,3.27e-23,3;UBERON:0001042,6.13e-08,10;UBERON:0009145,6.13e-08,10;UBERON:0006562,2.47e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29485767437579,4.72248911538736,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0,0,0,0,0.202117188958219,1.30630048738177,0.684466602170562,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p20@NEB | |||
}} |
Revision as of 05:59, 21 January 2014
Short description: | p20@NEB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | No |
Description: | CAGE_peak_20_at_NEB_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | 234bp_to_ENST00000484968_5end |
EntrezGene: | NEB |
HGNC: | 7720 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.66e-66 | 1 |
soleus muscle | 4.66e-66 | 1 |
appendage | 4.66e-66 | 1 |
lower limb segment | 4.66e-66 | 1 |
multi-limb segment region | 4.66e-66 | 1 |
hindlimb muscle | 4.66e-66 | 1 |
hindlimb zeugopod muscle | 4.66e-66 | 1 |
paired limb/fin | 4.66e-66 | 1 |
limb | 4.66e-66 | 1 |
pelvic appendage | 4.66e-66 | 1 |
limb segment | 4.66e-66 | 1 |
paired limb/fin segment | 4.66e-66 | 1 |
limb muscle | 4.66e-66 | 1 |
pelvic complex muscle | 4.66e-66 | 1 |
zeugopod | 4.66e-66 | 1 |
muscle of leg | 4.66e-66 | 1 |
paired limb/fin bud | 4.66e-66 | 1 |
limb bud | 4.66e-66 | 1 |
pelvic appendage bud | 4.66e-66 | 1 |
limb/fin field | 4.66e-66 | 1 |
subdivision of organism along appendicular axis | 4.66e-66 | 1 |
appendage girdle complex | 4.66e-66 | 1 |
leg | 4.66e-66 | 1 |
hindlimb | 4.66e-66 | 1 |
triceps surae | 4.66e-66 | 1 |
hindlimb zeugopod | 4.66e-66 | 1 |
posterior region of body | 4.66e-66 | 1 |
pelvic complex | 4.66e-66 | 1 |
limb field | 4.66e-66 | 1 |
hindlimb/pelvic fin field | 4.66e-66 | 1 |
muscle structure | 7.05e-34 | 2 |
muscle organ | 7.05e-34 | 2 |
tongue | 3.27e-23 | 3 |
gustatory system | 3.27e-23 | 3 |
future tongue | 3.27e-23 | 3 |
chordate pharynx | 6.13e-08 | 10 |
pharyngeal region of foregut | 6.13e-08 | 10 |
pharynx | 2.47e-07 | 11 |