FFCP PHASE1:Mm9::chr10:127321403..127321407,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=128|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:127321403..127321407,-|id=chr10:127321403..127321407,-|ontology_enrichment_celltype=CL:0000181!1.06e-15!5;CL:0000417!1.06e-15!5;CL:0000668!1.06e-15!5;CL:0000412!1.06e-15!5;CL:0000182!1.06e-15!5;CL:0000414!3.43e-07!11|ontology_enrichment_celltype_v019_2=CL:0000182,5.81e-56,5;CL:0000057,1.74e-18,1;CL:0000632,1.74e-18,1;CL:0000223,1.23e-14,20;CL:0000066,7.49e-12,25;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54;CL:0000151,4.77e-07,3;CL:0000499,4.77e-07,3;CL:0000327,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.07e-09!22;UBERON:0007499!1.07e-09!22;UBERON:0006925!1.07e-09!22;UBERON:0009497!1.07e-09!22;UBERON:0000015!1.07e-09!22;UBERON:0002423!1.07e-09!22;UBERON:0006235!1.07e-09!22;UBERON:0008835!1.07e-09!22;UBERON:0003894!1.07e-09!22;UBERON:0004161!1.07e-09!22;UBERON:0008836!1.07e-09!22;UBERON:0009854!3.07e-09!23;UBERON:0009856!3.07e-09!23;UBERON:0002365!1.96e-08!25;UBERON:0002330!1.96e-08!25|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.26e-20,22;UBERON:0007499,2.26e-20,22;UBERON:0006925,2.26e-20,22;UBERON:0009497,2.26e-20,22;UBERON:0000015,2.26e-20,22;UBERON:0002423,2.26e-20,22;UBERON:0006235,2.26e-20,22;UBERON:0008835,2.26e-20,22;UBERON:0003894,2.26e-20,22;UBERON:0004161,2.26e-20,22;UBERON:0008836,2.26e-20,22;UBERON:0009854,1.61e-19,23;UBERON:0009856,1.61e-19,23;UBERON:0002365,5.10e-18,25;UBERON:0002330,5.10e-18,25;UBERON:0005256,2.64e-10,45;UBERON:0002384,4.29e-10,46;UBERON:0003914,6.83e-10,47;UBERON:0005172,1.64e-09,49;UBERON:0005173,1.64e-09,49;UBERON:0002417,1.64e-09,49;UBERON:0000916,1.64e-09,49;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0003104,9.51e-08,61;UBERON:0009142,9.51e-08,61;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0009569,3.36e-07,66;UBERON:0005911,6.58e-07,69|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74381489283248,2.719885334831,19.9690180905992,51.9821133958135,9.40856462904405,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr10:127321403..127321407,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:127321403..127321407,- | |||
|description=CAGE_peak_at_chr10:127321403..127321407,- | |||
|id=chr10:127321403..127321407,- | |||
|ontology_enrichment_celltype=CL:0000181!1.06e-15!5;CL:0000417!1.06e-15!5;CL:0000668!1.06e-15!5;CL:0000412!1.06e-15!5;CL:0000182!1.06e-15!5;CL:0000414!3.43e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.81e-56,5;CL:0000057,1.74e-18,1;CL:0000632,1.74e-18,1;CL:0000223,1.23e-14,20;CL:0000066,7.49e-12,25;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54;CL:0000151,4.77e-07,3;CL:0000499,4.77e-07,3;CL:0000327,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.07e-09!22;UBERON:0007499!1.07e-09!22;UBERON:0006925!1.07e-09!22;UBERON:0009497!1.07e-09!22;UBERON:0000015!1.07e-09!22;UBERON:0002423!1.07e-09!22;UBERON:0006235!1.07e-09!22;UBERON:0008835!1.07e-09!22;UBERON:0003894!1.07e-09!22;UBERON:0004161!1.07e-09!22;UBERON:0008836!1.07e-09!22;UBERON:0009854!3.07e-09!23;UBERON:0009856!3.07e-09!23;UBERON:0002365!1.96e-08!25;UBERON:0002330!1.96e-08!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.26e-20,22;UBERON:0007499,2.26e-20,22;UBERON:0006925,2.26e-20,22;UBERON:0009497,2.26e-20,22;UBERON:0000015,2.26e-20,22;UBERON:0002423,2.26e-20,22;UBERON:0006235,2.26e-20,22;UBERON:0008835,2.26e-20,22;UBERON:0003894,2.26e-20,22;UBERON:0004161,2.26e-20,22;UBERON:0008836,2.26e-20,22;UBERON:0009854,1.61e-19,23;UBERON:0009856,1.61e-19,23;UBERON:0002365,5.10e-18,25;UBERON:0002330,5.10e-18,25;UBERON:0005256,2.64e-10,45;UBERON:0002384,4.29e-10,46;UBERON:0003914,6.83e-10,47;UBERON:0005172,1.64e-09,49;UBERON:0005173,1.64e-09,49;UBERON:0002417,1.64e-09,49;UBERON:0000916,1.64e-09,49;UBERON:0003929,1.55e-08,55;UBERON:0002368,7.20e-08,60;UBERON:0003104,9.51e-08,61;UBERON:0009142,9.51e-08,61;UBERON:0002530,2.65e-07,65;UBERON:0000490,3.36e-07,66;UBERON:0009569,3.36e-07,66;UBERON:0005911,6.58e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.74381489283248,2.719885334831,19.9690180905992,51.9821133958135,9.40856462904405,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0,0,0,0,0,0.38581844092741,0,0,0.342869252385415,0.354951612318675,0,0.145346416632329,0,0.169229215783353,0.548783918618318,0,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:127321403..127321407,- | |||
}} |
Latest revision as of 02:00, 4 August 2015
Short description: | p@chr10:127321403..127321407, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:127321403..127321407, - |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.81e-56 | 5 |
fibroblast | 1.74e-18 | 1 |
hepatic stellate cell | 1.74e-18 | 1 |
endodermal cell | 1.23e-14 | 20 |
epithelial cell | 7.49e-12 | 25 |
connective tissue cell | 4.29e-10 | 46 |
mesenchymal cell | 4.29e-10 | 46 |
motile cell | 1.10e-08 | 54 |
secretory cell | 4.77e-07 | 3 |
stromal cell | 4.77e-07 | 3 |
extracellular matrix secreting cell | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.26e-20 | 22 |
epithelial sac | 2.26e-20 | 22 |
digestive gland | 2.26e-20 | 22 |
epithelium of foregut-midgut junction | 2.26e-20 | 22 |
anatomical boundary | 2.26e-20 | 22 |
hepatobiliary system | 2.26e-20 | 22 |
foregut-midgut junction | 2.26e-20 | 22 |
hepatic diverticulum | 2.26e-20 | 22 |
liver primordium | 2.26e-20 | 22 |
septum transversum | 2.26e-20 | 22 |
liver bud | 2.26e-20 | 22 |
digestive tract diverticulum | 1.61e-19 | 23 |
sac | 1.61e-19 | 23 |
exocrine gland | 5.10e-18 | 25 |
exocrine system | 5.10e-18 | 25 |
trunk mesenchyme | 2.64e-10 | 45 |
connective tissue | 4.29e-10 | 46 |
epithelial tube | 6.83e-10 | 47 |
abdomen element | 1.64e-09 | 49 |
abdominal segment element | 1.64e-09 | 49 |
abdominal segment of trunk | 1.64e-09 | 49 |
abdomen | 1.64e-09 | 49 |
gut epithelium | 1.55e-08 | 55 |
endocrine gland | 7.20e-08 | 60 |
mesenchyme | 9.51e-08 | 61 |
entire embryonic mesenchyme | 9.51e-08 | 61 |
gland | 2.65e-07 | 65 |
unilaminar epithelium | 3.36e-07 | 66 |
subdivision of trunk | 3.36e-07 | 66 |
endo-epithelium | 6.58e-07 | 69 |