FFCP PHASE1:Hg19::chr2:218088466..218088479,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:218088466..218088479,+ | |||
|id=chr2:218088466..218088479,+ | |||
|ontology_enrichment_celltype=CL:0000057!3.72e-08!75;CL:0002620!3.09e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002127;3.17e-09;1!CL:0000911;3.17e-09;1!CL:0000814;3.17e-09;1!CL:0002174;6.98e-09;1!CL:0000501;6.98e-09;1!CL:1000306;1.76e-08;4!CL:0002547;1.76e-08;4!CL:0002620;4.75e-08;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.05e-09,1;CL:0000914,3.05e-09,1;CL:0000911,3.05e-09,1;CL:0000814,3.05e-09,1;CL:0002042,3.05e-09,1;CL:0002039,3.05e-09,1;CL:0002040,3.05e-09,1;CL:0002041,3.05e-09,1;CL:0002174,4.54e-09,1;CL:0000501,4.54e-09,1;CL:1000306,1.70e-08,4;CL:0002547,1.70e-08,4;CL:0002620,5.77e-08,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.46e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5662;1.88e-09;1!DOID:3571;6.98e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.89e-09,1;DOID:3571,5.31e-09,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;2.30e-09;1!UBERON:0005208;2.30e-09;1!UBERON:0004145;2.30e-09;1!UBERON:0005946;2.30e-09;1!UBERON:0005965;2.30e-09;1!UBERON:0002078;2.30e-09;1!UBERON:0004797;1.76e-08;4!UBERON:0000415;1.76e-08;4!UBERON:0007240;1.76e-08;4!UBERON:0005742;1.76e-08;4!UBERON:0005734;1.76e-08;4!UBERON:0004664;1.76e-08;4!UBERON:0004663;1.76e-08;4!UBERON:0002118;4.42e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,1.74e-10,7;UBERON:0002134,2.22e-09,1;UBERON:0005208,2.22e-09,1;UBERON:0005946,2.22e-09,1;UBERON:0005965,2.22e-09,1;UBERON:0002078,2.22e-09,1;UBERON:0000415,1.70e-08,4;UBERON:0007240,1.70e-08,4;UBERON:0005742,1.70e-08,4;UBERON:0005734,1.70e-08,4;UBERON:0004664,1.70e-08,4;UBERON:0004663,1.70e-08,4;UBERON:0002118,4.43e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0.251085279189606,0,0.164201178899891,0.157421562627358,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,1.43846196161075,0.512321413058201,1.41889337933151,0,0,0,0,0,0,0,0,0.639337125799041,0.659702600373432,0.398927315243264,0,0,0,0,2.26123798731069,2.08593167368081,0.868755378820466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,1.01304409331664,1.98613771219828,0.860509862246441,0,0,0,0.24666754841716,0.311211035399766,0,0,0,0,0,0,0,0.149448680551801,0,0.161872944368132,0,0.204154171254893,0,0,0,0,0.910161361938026,0.718618141816238,0.168336113954066,0,0.277064115484183,0,0,0,0.113432183160021,1.25572744982203,0.427114777637135,0.211931901159562,0.300091096084402,0,1.28820270022815,0,1.18143432568886,0.0974370051611986,1.00973509697646,0,0,1.06502877754984,0.201504196455281,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.4400297149257,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69004345584465,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0.154209693802656,0,0,1.55776328755086,0.348631135379878,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0.462145851343933,0,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,3.46293581513704,0,0,0,0,0.37064843820784,0.143124886741991,0,0,0,0,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0,0,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,0,0,0.608731130888112,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.997896857164083,0.5745161103971,0,0,0.561594356226918,0,0,0,0,4.17528995269619,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.796991953004279,0,0,2.45444838005172,0,0.311039587661807,0.269605053441981,0.179021174675609,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,15.5410453831075,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0.69647365264322,0,0,0,0,0,0.0969890164884194,0,0,0,0.19871461170299,0,0,0.561111741760736,0,0,0,0,0,0,0.124252535565433,0,0,0.209205692624666,0.101998217636322,0,0,0,0,1.71906176567983,0,0.279282401272254,0,3.58936512288407,0,0,0,0.335917362433631,1.44119953416961,0,0,0,0,0.295282444544246,0.338693328263138,0,0,0,0,0,0,0,0,0,0,0.314727528809989,0.105600336519406,0,0,0,0,0,0,0,0,0,7.88088199193654,0.170388021785422,0.339936274560377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.251567901752575,0,0,0.151230923763239,0,0.295710299979268,0.318593534327405,0,0.621051827505038,0,0.53168342911599,0.521745061811734,0.300515217994437,0,0,0.909243296012797,0.429642228169954,2.78420255927096,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0.381382095467167,0,0,0,0.40341013740704,0,0,0.982631505060581,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0.115233987555779,6.00208033030965,0,0,0,0.222462803784138,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.657887425858975,0.773494655682926,0.0999411559249289,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0.448527450322454,0.0636471582781649,0,0.217716747896961,0,0.0673520530145875,0,0,0.0814032686109745,0.106727345877715,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr2:218088466..218088479,+ | |||
}} |
Revision as of 08:33, 21 January 2014
Short description: | p@chr2:218088466..218088479, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:218088466..218088479, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.05e-09 | 1 |
immature NK T cell | 3.05e-09 | 1 |
effector T cell | 3.05e-09 | 1 |
mature NK T cell | 3.05e-09 | 1 |
immature NK T cell stage IV | 3.05e-09 | 1 |
immature NK T cell stage I | 3.05e-09 | 1 |
immature NK T cell stage II | 3.05e-09 | 1 |
immature NK T cell stage III | 3.05e-09 | 1 |
follicular cell of ovary | 4.54e-09 | 1 |
granulosa cell | 4.54e-09 | 1 |
fibroblast of tunica adventitia of artery | 1.70e-08 | 4 |
fibroblast of the aortic adventitia | 1.70e-08 | 4 |
skin fibroblast | 5.77e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
blood vessel layer | 1.74e-10 | 7 |
tricuspid valve | 2.22e-09 | 1 |
right atrium valve | 2.22e-09 | 1 |
outflow tract of atrium | 2.22e-09 | 1 |
outflow part of right atrium | 2.22e-09 | 1 |
right cardiac atrium | 2.22e-09 | 1 |
artery wall | 1.70e-08 | 4 |
tunica adventitia of artery | 1.70e-08 | 4 |
adventitia | 1.70e-08 | 4 |
tunica adventitia of blood vessel | 1.70e-08 | 4 |
aorta tunica adventitia | 1.70e-08 | 4 |
aorta wall | 1.70e-08 | 4 |
right ovary | 4.43e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.89e-09 | 1 |
liver cancer | 5.31e-09 | 1 |