FFCP PHASE1:Mm9::chr10:61990135..61990148,-: Difference between revisions
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{{FFCP|EntrezGene=19073|HGNC=|MCL_coexpression_id=32|UniProt=E0CYA5|association_with_transcript=24bp_to_ENSMUST00000160643,ENSMUST00000162956_5end|description=CAGE_peak_5_at_Srgn_5end|id=chr10:61990135..61990148,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!1.09e-11!14;UBERON:0000117!1.09e-11!14;UBERON:0000171!1.09e-11!14;UBERON:0000170!1.09e-11!14;UBERON:0005597!1.09e-11!14;UBERON:0000118!1.09e-11!14;UBERON:0005153!2.21e-09!17;UBERON:0005178!2.44e-08!17;UBERON:0005181!2.44e-08!17;UBERON:0002224!2.44e-08!17;UBERON:0000915!2.44e-08!17;UBERON:0008947!2.44e-08!17;UBERON:0003258!2.44e-08!17|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.81e-45,14;UBERON:0000117,4.81e-45,14;UBERON:0000171,4.81e-45,14;UBERON:0000170,4.81e-45,14;UBERON:0005597,4.81e-45,14;UBERON:0000118,4.81e-45,14;UBERON:0005153,1.10e-36,17;UBERON:0005178,1.10e-36,17;UBERON:0005181,1.10e-36,17;UBERON:0002224,1.10e-36,17;UBERON:0000915,1.10e-36,17;UBERON:0008947,1.10e-36,17;UBERON:0003258,1.10e-36,17;UBERON:0005157,7.90e-31,20;UBERON:0000310,1.59e-15,6;UBERON:0001443,1.59e-15,6;UBERON:0000065,8.40e-14,41;UBERON:0001004,2.05e-13,42;UBERON:0005631,5.07e-12,3;UBERON:0000478,5.07e-12,3;UBERON:0000158,5.07e-12,3;UBERON:0009569,1.84e-10,66;UBERON:0001987,1.26e-08,2;UBERON:0003124,1.26e-08,2;UBERON:0004340,1.26e-08,2;UBERON:0005911,1.68e-08,69;UBERON:0004119,2.50e-08,118;UBERON:0000925,2.50e-08,118;UBERON:0006595,2.50e-08,118;UBERON:0005177,2.85e-08,79;UBERON:0001041,3.92e-08,80;UBERON:0002100,6.50e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0,0.420649922702764,0,0.883474163806454,0.367472397644862,0.0958454710182364,0,0,0.510749352340751,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0.883885756421003,0.427115042397309,0,0.075726193333184,0,2.31891590961342,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.452167921657868,0.352766121407114,0.251333182659351,2.71914464507811,0,0.884610551949874,0,0,0.484875253135222,0,0,0.209446706813455,0.510914110417183,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.521472960576829,0.255715457330331,0.41557608911912,0.324482526135515,0.101839363850316,0,0.252722758433675,0,0,0,0.360124259610698,0.150704817835715,0.136072998302656,0.512454881139399,0.281105173679186,0.258703370739016,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0.420579897128254,0.720332286654991,0,0.264450566663544,0,0,0.644337306610467,0.605050573870028,1.33426826306922,0.760902504450237,0,1.31759163779209,0.502670417600539,0.596869416123452,0.779856348476481,0,0.648414149624083,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0.964708639009667,0.50925170356284,0.287696137450811,0.324270453550071,0.549122826376163,0,0.372140947668503,0.624075346229121,0.252578877947112,0.538192240565737,0,14.041242452662,0.37898282354097,1.79261474086228,1.69745085775188,1.87752198630802,3.1826188913945,9.04565835366852,4.48807390072937,15.1329738341943,15.723992965063,11.1618338060241,12.9452018625433,13.8147985492716,14.7542039753142,0,0,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.565815239267694,0.885905678642318,0,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0.214337035031592,1.06404140185364,0.178368817602071,0.658196082408484,0,3.52007562095566,4.02480934641258,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0,0.82554747185289,1.66675074632741,0.565105371014073,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.578574190077352,0.26175594198403,0.259229946583586,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0.750729901804728,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0.512200817262403,0.486213434136588,0,0,0.44449345560323,0,0.64183841918363,0,0.50695859978048,0.943131706930381,0.37456602987953,0.768301828858431,0.804096565378586,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.735994600671987,0.685738504770831,0.532427418478012,0,0.290692833264657,0.188218760830661,0.592302255241736,0.365855945745545,0.263069711437843,0.135804113845862,1.12228454331548,0.474540072496697,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0,0.935726433781634,1.07435527024149,0.191288332068843,0,0|short_description=p5@Srgn}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19073 | |||
|HGNC= | |||
|MCL_coexpression_id=32 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E0CYA5 | |||
|association_with_transcript=24bp_to_ENSMUST00000160643,ENSMUST00000162956_5end | |||
|cluster_id=chr10:61990135..61990148,- | |||
|description=CAGE_peak_5_at_Srgn_5end | |||
|id=chr10:61990135..61990148,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!1.09e-11!14;UBERON:0000117!1.09e-11!14;UBERON:0000171!1.09e-11!14;UBERON:0000170!1.09e-11!14;UBERON:0005597!1.09e-11!14;UBERON:0000118!1.09e-11!14;UBERON:0005153!2.21e-09!17;UBERON:0005178!2.44e-08!17;UBERON:0005181!2.44e-08!17;UBERON:0002224!2.44e-08!17;UBERON:0000915!2.44e-08!17;UBERON:0008947!2.44e-08!17;UBERON:0003258!2.44e-08!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,4.81e-45,14;UBERON:0000117,4.81e-45,14;UBERON:0000171,4.81e-45,14;UBERON:0000170,4.81e-45,14;UBERON:0005597,4.81e-45,14;UBERON:0000118,4.81e-45,14;UBERON:0005153,1.10e-36,17;UBERON:0005178,1.10e-36,17;UBERON:0005181,1.10e-36,17;UBERON:0002224,1.10e-36,17;UBERON:0000915,1.10e-36,17;UBERON:0008947,1.10e-36,17;UBERON:0003258,1.10e-36,17;UBERON:0005157,7.90e-31,20;UBERON:0000310,1.59e-15,6;UBERON:0001443,1.59e-15,6;UBERON:0000065,8.40e-14,41;UBERON:0001004,2.05e-13,42;UBERON:0005631,5.07e-12,3;UBERON:0000478,5.07e-12,3;UBERON:0000158,5.07e-12,3;UBERON:0009569,1.84e-10,66;UBERON:0001987,1.26e-08,2;UBERON:0003124,1.26e-08,2;UBERON:0004340,1.26e-08,2;UBERON:0005911,1.68e-08,69;UBERON:0004119,2.50e-08,118;UBERON:0000925,2.50e-08,118;UBERON:0006595,2.50e-08,118;UBERON:0005177,2.85e-08,79;UBERON:0001041,3.92e-08,80;UBERON:0002100,6.50e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.36069264241712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0,0.420649922702764,0,0.883474163806454,0.367472397644862,0.0958454710182364,0,0,0.510749352340751,0,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0.883885756421003,0.427115042397309,0,0.075726193333184,0,2.31891590961342,0,0,0,0,0,0.702222100658759,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0.452167921657868,0.352766121407114,0.251333182659351,2.71914464507811,0,0.884610551949874,0,0,0.484875253135222,0,0,0.209446706813455,0.510914110417183,0,0,0,0.299581278809645,0.457500602818626,0.125654352112864,0.521472960576829,0.255715457330331,0.41557608911912,0.324482526135515,0.101839363850316,0,0.252722758433675,0,0,0,0.360124259610698,0.150704817835715,0.136072998302656,0.512454881139399,0.281105173679186,0.258703370739016,0,0,0,0.219195732427575,0,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0.16455984991348,0.164167464079095,0.162137619091711,0,0,0.134206418760372,0.420579897128254,0.720332286654991,0,0.264450566663544,0,0,0.644337306610467,0.605050573870028,1.33426826306922,0.760902504450237,0,1.31759163779209,0.502670417600539,0.596869416123452,0.779856348476481,0,0.648414149624083,0.199141273254367,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.189709611372772,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0.964708639009667,0.50925170356284,0.287696137450811,0.324270453550071,0.549122826376163,0,0.372140947668503,0.624075346229121,0.252578877947112,0.538192240565737,0,14.041242452662,0.37898282354097,1.79261474086228,1.69745085775188,1.87752198630802,3.1826188913945,9.04565835366852,4.48807390072937,15.1329738341943,15.723992965063,11.1618338060241,12.9452018625433,13.8147985492716,14.7542039753142,0,0,0,0.275936746304732,0.160550589987792,0.35163505977661,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.565815239267694,0.885905678642318,0,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0,0,0,0.214337035031592,1.06404140185364,0.178368817602071,0.658196082408484,0,3.52007562095566,4.02480934641258,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0,0.291480836629851,0,0,0.82554747185289,1.66675074632741,0.565105371014073,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.324016022465404,0.418176592028937,0.218362563746178,0.539457385539283,0.578574190077352,0.26175594198403,0.259229946583586,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0,0.104859344425711,0,0,0,0.202725215290164,0.205421914329655,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0.750729901804728,0.183151624267265,0,0,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0,0,0,0.512200817262403,0.486213434136588,0,0,0.44449345560323,0,0.64183841918363,0,0.50695859978048,0.943131706930381,0.37456602987953,0.768301828858431,0.804096565378586,0.476293691283074,0.579421629724277,0.578727661391115,0.412085900803307,0.735994600671987,0.685738504770831,0.532427418478012,0,0.290692833264657,0.188218760830661,0.592302255241736,0.365855945745545,0.263069711437843,0.135804113845862,1.12228454331548,0.474540072496697,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,0,0.935726433781634,1.07435527024149,0.191288332068843,0,0 | |||
|short_description=p5@Srgn | |||
}} |
Revision as of 13:59, 4 August 2015
Short description: | p5@Srgn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Srgn_5end |
Coexpression cluster: | MCL_coexpression_mm9:32 |
Association with transcript: | 24bp_to_ENSMUST00000160643, ENSMUST00000162956_5end |
EntrezGene: | 19073 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung | 4.81e-45 | 14 |
respiratory tube | 4.81e-45 | 14 |
respiration organ | 4.81e-45 | 14 |
pair of lungs | 4.81e-45 | 14 |
lung primordium | 4.81e-45 | 14 |
lung bud | 4.81e-45 | 14 |
epithelial bud | 1.10e-36 | 17 |
thoracic cavity element | 1.10e-36 | 17 |
thoracic segment organ | 1.10e-36 | 17 |
thoracic cavity | 1.10e-36 | 17 |
thoracic segment of trunk | 1.10e-36 | 17 |
respiratory primordium | 1.10e-36 | 17 |
endoderm of foregut | 1.10e-36 | 17 |
epithelial fold | 7.90e-31 | 20 |
breast | 1.59e-15 | 6 |
chest | 1.59e-15 | 6 |
respiratory tract | 8.40e-14 | 41 |
respiratory system | 2.05e-13 | 42 |
extraembryonic membrane | 5.07e-12 | 3 |
extraembryonic structure | 5.07e-12 | 3 |
membranous layer | 5.07e-12 | 3 |
subdivision of trunk | 1.84e-10 | 66 |
placenta | 1.26e-08 | 2 |
chorion | 1.26e-08 | 2 |
allantois | 1.26e-08 | 2 |
endo-epithelium | 1.68e-08 | 69 |
endoderm-derived structure | 2.50e-08 | 118 |
endoderm | 2.50e-08 | 118 |
presumptive endoderm | 2.50e-08 | 118 |
trunk region element | 2.85e-08 | 79 |
foregut | 3.92e-08 | 80 |
trunk | 6.50e-07 | 90 |