FFCP PHASE1:Mm9::chr11:6461181..6461184,+: Difference between revisions
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{{FFCP|EntrezGene=216527|HGNC=|MCL_coexpression_id=33|UniProt=E0CXR5|association_with_transcript=44bp_to_ENSMUST00000160633_5end|description=CAGE_peak_7_at_Ccm2_5end|id=chr11:6461181..6461184,+|ontology_enrichment_celltype=CL:0000988!2.03e-09!32;CL:0002032!2.03e-09!32;CL:0000037!2.03e-09!32;CL:0000566!2.03e-09!32;CL:0000837!2.03e-09!32;CL:0000838!3.55e-09!12;CL:0002031!6.18e-09!25;CL:0000542!2.72e-08!13;CL:0000051!2.72e-08!13;CL:0000084!3.74e-08!11;CL:0000827!3.74e-08!11;CL:0000738!3.62e-07!17;CL:0002087!3.62e-07!17|ontology_enrichment_celltype_v019_2=CL:0000625,7.11e-12,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.63e-18!29;UBERON:0002390!1.37e-17!45;UBERON:0003061!1.37e-17!45;UBERON:0002193!2.36e-17!48;UBERON:0006562!8.90e-15!24;UBERON:0001557!8.90e-15!24;UBERON:0001042!8.90e-15!24;UBERON:0008814!8.90e-15!24;UBERON:0009145!8.90e-15!24;UBERON:0002370!6.83e-14!23;UBERON:0000974!6.83e-14!23;UBERON:0004807!6.83e-14!23;UBERON:0005058!6.83e-14!23;UBERON:0003351!6.83e-14!23;UBERON:0009113!6.83e-14!23;UBERON:0003295!6.83e-14!23;UBERON:0009722!6.83e-14!23;UBERON:0005562!6.83e-14!23;UBERON:0007690!6.83e-14!23;UBERON:0003408!4.18e-13!24;UBERON:0000072!1.51e-12!27;UBERON:0000065!2.16e-11!41;UBERON:0002405!5.26e-11!70;UBERON:0001004!5.72e-11!42;UBERON:0005057!2.42e-09!51;UBERON:0000063!1.58e-08!35;UBERON:0003081!2.77e-08!88;UBERON:0001041!1.20e-07!92;UBERON:0000077!1.93e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.17e-23,23;UBERON:0000974,2.17e-23,23;UBERON:0004807,2.17e-23,23;UBERON:0005058,2.17e-23,23;UBERON:0003351,2.17e-23,23;UBERON:0009113,2.17e-23,23;UBERON:0003295,2.17e-23,23;UBERON:0009722,2.17e-23,23;UBERON:0005562,2.17e-23,23;UBERON:0007690,2.17e-23,23;UBERON:0006562,2.01e-22,24;UBERON:0003408,2.01e-22,24;UBERON:0001557,2.01e-22,24;UBERON:0001042,2.01e-22,24;UBERON:0008814,2.01e-22,24;UBERON:0009145,2.01e-22,24;UBERON:0000072,6.04e-20,27;UBERON:0004177,1.41e-18,29;UBERON:0005057,1.41e-18,29;UBERON:0000077,2.09e-15,35;UBERON:0007811,5.59e-15,36;UBERON:0000065,3.72e-13,41;UBERON:0001004,7.65e-13,42;UBERON:0000153,1.52e-12,43;UBERON:0002390,5.49e-12,45;UBERON:0003061,5.49e-12,45;UBERON:0002193,3.09e-11,48;UBERON:0002405,3.09e-11,48;UBERON:0003929,8.45e-10,55;UBERON:0002368,5.62e-09,60;UBERON:0002530,2.81e-08,65;UBERON:0000490,3.76e-08,66;UBERON:0005911,8.62e-08,69;UBERON:0000949,1.85e-07,72|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.703943610758334,0,0,0,1.71200729931206,0.611942816932982,0.666219523631325,0,0,0.630924330716475,0.822686601634433,0.42438965179803,0,0.397163804803541,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0.164140899745061,0,0,0.341741761595705,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0,0.509935289981566,0.419854356970974,0.276399947608848,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0.308132871494482,0.25984164595559,0.537080087002444,0.39736270956253,0.120195449519969,1.47689527174577,1.51449674922221,1.06689529317,1.20991422164209,1.26695244961678,0.865906574762965,3.62318396762864,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421|short_description=p7@Ccm2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:216527 | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E0CXR5 | |||
|association_with_transcript=44bp_to_ENSMUST00000160633_5end | |||
|cluster_id=chr11:6461181..6461184,+ | |||
|description=CAGE_peak_7_at_Ccm2_5end | |||
|id=chr11:6461181..6461184,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.03e-09!32;CL:0002032!2.03e-09!32;CL:0000037!2.03e-09!32;CL:0000566!2.03e-09!32;CL:0000837!2.03e-09!32;CL:0000838!3.55e-09!12;CL:0002031!6.18e-09!25;CL:0000542!2.72e-08!13;CL:0000051!2.72e-08!13;CL:0000084!3.74e-08!11;CL:0000827!3.74e-08!11;CL:0000738!3.62e-07!17;CL:0002087!3.62e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.11e-12,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.63e-18!29;UBERON:0002390!1.37e-17!45;UBERON:0003061!1.37e-17!45;UBERON:0002193!2.36e-17!48;UBERON:0006562!8.90e-15!24;UBERON:0001557!8.90e-15!24;UBERON:0001042!8.90e-15!24;UBERON:0008814!8.90e-15!24;UBERON:0009145!8.90e-15!24;UBERON:0002370!6.83e-14!23;UBERON:0000974!6.83e-14!23;UBERON:0004807!6.83e-14!23;UBERON:0005058!6.83e-14!23;UBERON:0003351!6.83e-14!23;UBERON:0009113!6.83e-14!23;UBERON:0003295!6.83e-14!23;UBERON:0009722!6.83e-14!23;UBERON:0005562!6.83e-14!23;UBERON:0007690!6.83e-14!23;UBERON:0003408!4.18e-13!24;UBERON:0000072!1.51e-12!27;UBERON:0000065!2.16e-11!41;UBERON:0002405!5.26e-11!70;UBERON:0001004!5.72e-11!42;UBERON:0005057!2.42e-09!51;UBERON:0000063!1.58e-08!35;UBERON:0003081!2.77e-08!88;UBERON:0001041!1.20e-07!92;UBERON:0000077!1.93e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.17e-23,23;UBERON:0000974,2.17e-23,23;UBERON:0004807,2.17e-23,23;UBERON:0005058,2.17e-23,23;UBERON:0003351,2.17e-23,23;UBERON:0009113,2.17e-23,23;UBERON:0003295,2.17e-23,23;UBERON:0009722,2.17e-23,23;UBERON:0005562,2.17e-23,23;UBERON:0007690,2.17e-23,23;UBERON:0006562,2.01e-22,24;UBERON:0003408,2.01e-22,24;UBERON:0001557,2.01e-22,24;UBERON:0001042,2.01e-22,24;UBERON:0008814,2.01e-22,24;UBERON:0009145,2.01e-22,24;UBERON:0000072,6.04e-20,27;UBERON:0004177,1.41e-18,29;UBERON:0005057,1.41e-18,29;UBERON:0000077,2.09e-15,35;UBERON:0007811,5.59e-15,36;UBERON:0000065,3.72e-13,41;UBERON:0001004,7.65e-13,42;UBERON:0000153,1.52e-12,43;UBERON:0002390,5.49e-12,45;UBERON:0003061,5.49e-12,45;UBERON:0002193,3.09e-11,48;UBERON:0002405,3.09e-11,48;UBERON:0003929,8.45e-10,55;UBERON:0002368,5.62e-09,60;UBERON:0002530,2.81e-08,65;UBERON:0000490,3.76e-08,66;UBERON:0005911,8.62e-08,69;UBERON:0000949,1.85e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0.703943610758334,0,0,0,1.71200729931206,0.611942816932982,0.666219523631325,0,0,0.630924330716475,0.822686601634433,0.42438965179803,0,0.397163804803541,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0.971020706062307,0,0,0,0,0,0,0,0,0,0.335565212115473,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.359445373517761,0,0.254140454146129,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.397912944082302,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0.161464426695906,0,0,0.164140899745061,0,0,0.341741761595705,0.412773735926445,0.185194527369712,0.376736914009382,0.27338845544205,0,0.509935289981566,0.419854356970974,0.276399947608848,0,0,0,0,0,0.218362563746178,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0,0.308132871494482,0.25984164595559,0.537080087002444,0.39736270956253,0.120195449519969,1.47689527174577,1.51449674922221,1.06689529317,1.20991422164209,1.26695244961678,0.865906574762965,3.62318396762864,0.226730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0,0,0,0.231867835620421 | |||
|short_description=p7@Ccm2 | |||
}} |
Revision as of 07:32, 6 August 2015
Short description: | p7@Ccm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Ccm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | 44bp_to_ENSMUST00000160633_5end |
EntrezGene: | 216527 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.11e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.17e-23 | 23 |
neck | 2.17e-23 | 23 |
respiratory system epithelium | 2.17e-23 | 23 |
hemolymphoid system gland | 2.17e-23 | 23 |
pharyngeal epithelium | 2.17e-23 | 23 |
thymic region | 2.17e-23 | 23 |
pharyngeal gland | 2.17e-23 | 23 |
entire pharyngeal arch endoderm | 2.17e-23 | 23 |
thymus primordium | 2.17e-23 | 23 |
early pharyngeal endoderm | 2.17e-23 | 23 |
pharynx | 2.01e-22 | 24 |
gland of gut | 2.01e-22 | 24 |
upper respiratory tract | 2.01e-22 | 24 |
chordate pharynx | 2.01e-22 | 24 |
pharyngeal arch system | 2.01e-22 | 24 |
pharyngeal region of foregut | 2.01e-22 | 24 |
segment of respiratory tract | 6.04e-20 | 27 |
hemopoietic organ | 1.41e-18 | 29 |
immune organ | 1.41e-18 | 29 |
mixed endoderm/mesoderm-derived structure | 2.09e-15 | 35 |
craniocervical region | 5.59e-15 | 36 |
respiratory tract | 3.72e-13 | 41 |
respiratory system | 7.65e-13 | 42 |
anterior region of body | 1.52e-12 | 43 |
hematopoietic system | 5.49e-12 | 45 |
blood island | 5.49e-12 | 45 |
hemolymphoid system | 3.09e-11 | 48 |
immune system | 3.09e-11 | 48 |
gut epithelium | 8.45e-10 | 55 |
endocrine gland | 5.62e-09 | 60 |
gland | 2.81e-08 | 65 |
unilaminar epithelium | 3.76e-08 | 66 |
endo-epithelium | 8.62e-08 | 69 |
endocrine system | 1.85e-07 | 72 |