FFCP PHASE1:Hg19::chr3:12190041..12190062,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6854 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=11495 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000439861,uc003bwn.2_5end | |||
|coexpression_cluster_id=C173 | |||
|description=CAGE_peak_6_at_SYN2_5end | |||
|id=chr3:12190041..12190062,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.77e-31!15;CL:0002521!6.85e-16!3;CL:0000325!2.95e-13!39;CL:0002617!5.66e-11!2;CL:0002615!1.22e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.70e-80;13!CL:0002521;2.87e-50;3!CL:0002615;6.09e-23;3!CL:0002617;7.98e-10;2!CL:0002561;1.78e-09;2!CL:0002567;9.91e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.16e-69,15;CL:0002521,3.13e-50,3;CL:0002615,7.20e-23,3;CL:0002617,7.98e-10,2;CL:0002561,1.71e-09,2;CL:0002567,9.12e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:114!1.56e-10!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002190!6.85e-16!3;UBERON:0007023!6.49e-13!115;UBERON:0002081!9.67e-11!2;UBERON:0002072!1.03e-09!5;UBERON:0004151!1.98e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.87e-50;3!UBERON:0002072;1.65e-30;5!UBERON:0001013;2.43e-19;14!UBERON:0001389;5.72e-18;1!UBERON:0000026;5.72e-18;1!UBERON:0008784;5.72e-18;1!UBERON:0006058;5.72e-18;1!UBERON:0003663;5.72e-18;1!UBERON:0004256;5.72e-18;1!UBERON:0004708;5.72e-18;1!UBERON:0002101;5.72e-18;1!UBERON:0004709;5.72e-18;1!UBERON:0002529;5.72e-18;1!UBERON:0010538;5.72e-18;1!UBERON:0003661;5.72e-18;1!UBERON:0010890;5.72e-18;1!UBERON:0002471;5.72e-18;1!UBERON:0001383;5.72e-18;1!UBERON:0010758;5.72e-18;1!UBERON:0010707;5.72e-18;1!UBERON:0000978;5.72e-18;1!UBERON:0002103;5.72e-18;1!UBERON:0001665;5.72e-18;1!UBERON:0003823;5.72e-18;1!UBERON:0000154;5.72e-18;1!UBERON:0010709;5.72e-18;1!UBERON:0003688;5.52e-12;6!UBERON:0002358;5.52e-12;6!UBERON:0003684;5.52e-12;6!UBERON:0001178;5.52e-12;6!UBERON:0005090;1.17e-09;2!UBERON:0001630;1.17e-09;2!UBERON:0005933;1.78e-09;2!UBERON:0005942;1.78e-09;2!UBERON:0005932;1.78e-09;2!UBERON:0004457;2.70e-08;9!UBERON:0000042;2.70e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,3.13e-50,3;UBERON:0002072,1.73e-30,5;UBERON:0001013,2.44e-19,14;UBERON:0005418,6.23e-18,1;UBERON:0001389,6.23e-18,1;UBERON:0000026,6.23e-18,1;UBERON:0008784,6.23e-18,1;UBERON:0006058,6.23e-18,1;UBERON:0003663,6.23e-18,1;UBERON:0004256,6.23e-18,1;UBERON:0004708,6.23e-18,1;UBERON:0002101,6.23e-18,1;UBERON:0004709,6.23e-18,1;UBERON:0002529,6.23e-18,1;UBERON:0010538,6.23e-18,1;UBERON:0003661,6.23e-18,1;UBERON:0010890,6.23e-18,1;UBERON:0002471,6.23e-18,1;UBERON:0001383,6.23e-18,1;UBERON:0004357,6.23e-18,1;UBERON:0004347,6.23e-18,1;UBERON:0005420,6.23e-18,1;UBERON:0005732,6.23e-18,1;UBERON:0010758,6.23e-18,1;UBERON:0010707,6.23e-18,1;UBERON:0000978,6.23e-18,1;UBERON:0002103,6.23e-18,1;UBERON:0001665,6.23e-18,1;UBERON:0003823,6.23e-18,1;UBERON:0000154,6.23e-18,1;UBERON:0010709,6.23e-18,1;UBERON:0005733,6.23e-18,1;UBERON:0005730,6.23e-18,1;UBERON:0003688,6.00e-12,6;UBERON:0002358,6.00e-12,6;UBERON:0003684,6.00e-12,6;UBERON:0001178,6.00e-12,6;UBERON:0005090,1.22e-09,2;UBERON:0001630,1.22e-09,2;UBERON:0005933,1.71e-09,2;UBERON:0005942,1.71e-09,2;UBERON:0005932,1.71e-09,2 | |||
|phase1_expression=0.54503513781167,55.2379351638737,1.12763523276777,0,4.02264984984559,0,40.5279805069297,1.26343974685366,5.48489819219661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95572084034114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0.858452096273142,0.446342914883745,0.335917362433631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.628817220398664,0,0,0,0,0,0,2.0055191521816,0.612691153526923,2.95085367638824,0.157054096250234,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0,0,0,3.23714418593947,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p6@SYN2 | |||
}} |
Revision as of 17:25, 21 January 2014
Short description: | p6@SYN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SYN2_5end |
Coexpression cluster: | C173_Adipocyte_mature_skin_left_Hepatocyte_Osteoblast_adipose |
Association with transcript: | 0bp_to_ENST00000439861, uc003bwn.2_5end |
EntrezGene: | SYN2 |
HGNC: | 11495 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.16e-69 | 15 |
subcutaneous fat cell | 3.13e-50 | 3 |
adipocyte of omentum tissue | 7.20e-23 | 3 |
adipocyte of breast | 7.98e-10 | 2 |
outer root sheath cell | 1.71e-09 | 2 |
light melanocyte | 9.12e-07 | 3 |