FFCP PHASE1:Mm9::chr12:105579064..105579080,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=73|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:105579064..105579080,+|id=chr12:105579064..105579080,+|ontology_enrichment_celltype=CL:0000181!3.00e-20!5;CL:0000417!3.00e-20!5;CL:0000668!3.00e-20!5;CL:0000412!3.00e-20!5;CL:0000182!3.00e-20!5;CL:0000414!2.50e-09!11;CL:0000057!2.11e-07!1;CL:0000632!2.11e-07!1|ontology_enrichment_celltype_v019_2=CL:0000182,8.63e-27,5;CL:0000057,2.09e-09,1;CL:0000632,2.09e-09,1;CL:0000223,6.30e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!1.70e-31!22;UBERON:0007499!1.70e-31!22;UBERON:0006925!1.70e-31!22;UBERON:0009497!1.70e-31!22;UBERON:0000015!1.70e-31!22;UBERON:0002423!1.70e-31!22;UBERON:0006235!1.70e-31!22;UBERON:0008835!1.70e-31!22;UBERON:0003894!1.70e-31!22;UBERON:0004161!1.70e-31!22;UBERON:0008836!1.70e-31!22;UBERON:0009854!4.48e-30!23;UBERON:0009856!4.48e-30!23;UBERON:0002365!1.42e-27!25;UBERON:0002330!1.42e-27!25;UBERON:0005256!9.14e-17!47;UBERON:0005172!5.05e-16!49;UBERON:0005173!5.05e-16!49;UBERON:0002417!5.05e-16!49;UBERON:0000916!5.05e-16!49;UBERON:0003914!4.49e-14!47;UBERON:0005057!7.26e-13!51;UBERON:0002368!8.07e-13!60;UBERON:0003929!7.87e-12!55;UBERON:0002530!1.02e-11!65;UBERON:0009569!1.61e-11!66;UBERON:0000949!1.97e-10!72;UBERON:0000490!1.26e-09!66;UBERON:0005911!3.80e-09!69;UBERON:0002405!5.38e-09!70;UBERON:0005177!1.34e-08!85;UBERON:0000466!8.32e-08!79;UBERON:0002100!3.02e-07!98|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.65e-29,22;UBERON:0007499,6.65e-29,22;UBERON:0006925,6.65e-29,22;UBERON:0009497,6.65e-29,22;UBERON:0000015,6.65e-29,22;UBERON:0002423,6.65e-29,22;UBERON:0006235,6.65e-29,22;UBERON:0008835,6.65e-29,22;UBERON:0003894,6.65e-29,22;UBERON:0004161,6.65e-29,22;UBERON:0008836,6.65e-29,22;UBERON:0009854,1.25e-27,23;UBERON:0009856,1.25e-27,23;UBERON:0002365,2.20e-25,25;UBERON:0002330,2.20e-25,25;UBERON:0005256,7.25e-14,45;UBERON:0003914,2.99e-13,47;UBERON:0005172,1.10e-12,49;UBERON:0005173,1.10e-12,49;UBERON:0002417,1.10e-12,49;UBERON:0000916,1.10e-12,49;UBERON:0003929,3.13e-11,55;UBERON:0002368,3.07e-10,60;UBERON:0003104,4.63e-10,61;UBERON:0009142,4.63e-10,61;UBERON:0002530,2.13e-09,65;UBERON:0000490,3.02e-09,66;UBERON:0009569,3.02e-09,66;UBERON:0005911,8.19e-09,69;UBERON:0000949,2.05e-08,72;UBERON:0005177,1.33e-07,79;UBERON:0001041,1.69e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.487629785665,19.039197343817,55.0497255470573,32.4888208723835,17.0250217096988,2.94933282276679,0,0,0,0,0,0,0,0,0,0,8.44960709921044,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0,0.486405680325106,0,1.43768206527355,0,0,0.252578877947112,4.30553792452589,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:105579064..105579080,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=73 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:105579064..105579080,+ | |||
|description=CAGE_peak_at_chr12:105579064..105579080,+ | |||
|id=chr12:105579064..105579080,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.00e-20!5;CL:0000417!3.00e-20!5;CL:0000668!3.00e-20!5;CL:0000412!3.00e-20!5;CL:0000182!3.00e-20!5;CL:0000414!2.50e-09!11;CL:0000057!2.11e-07!1;CL:0000632!2.11e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.63e-27,5;CL:0000057,2.09e-09,1;CL:0000632,2.09e-09,1;CL:0000223,6.30e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.70e-31!22;UBERON:0007499!1.70e-31!22;UBERON:0006925!1.70e-31!22;UBERON:0009497!1.70e-31!22;UBERON:0000015!1.70e-31!22;UBERON:0002423!1.70e-31!22;UBERON:0006235!1.70e-31!22;UBERON:0008835!1.70e-31!22;UBERON:0003894!1.70e-31!22;UBERON:0004161!1.70e-31!22;UBERON:0008836!1.70e-31!22;UBERON:0009854!4.48e-30!23;UBERON:0009856!4.48e-30!23;UBERON:0002365!1.42e-27!25;UBERON:0002330!1.42e-27!25;UBERON:0005256!9.14e-17!47;UBERON:0005172!5.05e-16!49;UBERON:0005173!5.05e-16!49;UBERON:0002417!5.05e-16!49;UBERON:0000916!5.05e-16!49;UBERON:0003914!4.49e-14!47;UBERON:0005057!7.26e-13!51;UBERON:0002368!8.07e-13!60;UBERON:0003929!7.87e-12!55;UBERON:0002530!1.02e-11!65;UBERON:0009569!1.61e-11!66;UBERON:0000949!1.97e-10!72;UBERON:0000490!1.26e-09!66;UBERON:0005911!3.80e-09!69;UBERON:0002405!5.38e-09!70;UBERON:0005177!1.34e-08!85;UBERON:0000466!8.32e-08!79;UBERON:0002100!3.02e-07!98 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,6.65e-29,22;UBERON:0007499,6.65e-29,22;UBERON:0006925,6.65e-29,22;UBERON:0009497,6.65e-29,22;UBERON:0000015,6.65e-29,22;UBERON:0002423,6.65e-29,22;UBERON:0006235,6.65e-29,22;UBERON:0008835,6.65e-29,22;UBERON:0003894,6.65e-29,22;UBERON:0004161,6.65e-29,22;UBERON:0008836,6.65e-29,22;UBERON:0009854,1.25e-27,23;UBERON:0009856,1.25e-27,23;UBERON:0002365,2.20e-25,25;UBERON:0002330,2.20e-25,25;UBERON:0005256,7.25e-14,45;UBERON:0003914,2.99e-13,47;UBERON:0005172,1.10e-12,49;UBERON:0005173,1.10e-12,49;UBERON:0002417,1.10e-12,49;UBERON:0000916,1.10e-12,49;UBERON:0003929,3.13e-11,55;UBERON:0002368,3.07e-10,60;UBERON:0003104,4.63e-10,61;UBERON:0009142,4.63e-10,61;UBERON:0002530,2.13e-09,65;UBERON:0000490,3.02e-09,66;UBERON:0009569,3.02e-09,66;UBERON:0005911,8.19e-09,69;UBERON:0000949,2.05e-08,72;UBERON:0005177,1.33e-07,79;UBERON:0001041,1.69e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.487629785665,19.039197343817,55.0497255470573,32.4888208723835,17.0250217096988,2.94933282276679,0,0,0,0,0,0,0,0,0,0,8.44960709921044,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37162101669719,0,0,0,0,0,0,0,0.486405680325106,0,1.43768206527355,0,0,0.252578877947112,4.30553792452589,3.85954817090694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:105579064..105579080,+ | |||
}} |
Latest revision as of 15:27, 4 August 2015
Short description: | p@chr12:105579064..105579080, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:105579064..105579080, + |
Coexpression cluster: | MCL_coexpression_mm9:73 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.63e-27 | 5 |
fibroblast | 2.09e-09 | 1 |
hepatic stellate cell | 2.09e-09 | 1 |
endodermal cell | 6.30e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 6.65e-29 | 22 |
epithelial sac | 6.65e-29 | 22 |
digestive gland | 6.65e-29 | 22 |
epithelium of foregut-midgut junction | 6.65e-29 | 22 |
anatomical boundary | 6.65e-29 | 22 |
hepatobiliary system | 6.65e-29 | 22 |
foregut-midgut junction | 6.65e-29 | 22 |
hepatic diverticulum | 6.65e-29 | 22 |
liver primordium | 6.65e-29 | 22 |
septum transversum | 6.65e-29 | 22 |
liver bud | 6.65e-29 | 22 |
digestive tract diverticulum | 1.25e-27 | 23 |
sac | 1.25e-27 | 23 |
exocrine gland | 2.20e-25 | 25 |
exocrine system | 2.20e-25 | 25 |
trunk mesenchyme | 7.25e-14 | 45 |
epithelial tube | 2.99e-13 | 47 |
abdomen element | 1.10e-12 | 49 |
abdominal segment element | 1.10e-12 | 49 |
abdominal segment of trunk | 1.10e-12 | 49 |
abdomen | 1.10e-12 | 49 |
gut epithelium | 3.13e-11 | 55 |
endocrine gland | 3.07e-10 | 60 |
mesenchyme | 4.63e-10 | 61 |
entire embryonic mesenchyme | 4.63e-10 | 61 |
gland | 2.13e-09 | 65 |
unilaminar epithelium | 3.02e-09 | 66 |
subdivision of trunk | 3.02e-09 | 66 |
endo-epithelium | 8.19e-09 | 69 |
endocrine system | 2.05e-08 | 72 |
trunk region element | 1.33e-07 | 79 |
foregut | 1.69e-07 | 80 |