FFCP PHASE1:Mm9::chr16:93368659..93368676,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2176|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:93368659..93368676,+|id=chr16:93368659..93368676,+|ontology_enrichment_celltype=CL:0002563!1.39e-11!9;CL:0002251!1.39e-11!9;CL:0000239!2.26e-08!6;CL:0000677!2.26e-08!6;CL:0000212!2.26e-08!6;CL:0000584!2.26e-08!6;CL:0000075!5.04e-07!7|ontology_enrichment_celltype_v019_2=CL:0002563,2.51e-18,9;CL:0002251,2.51e-18,9;CL:0000239,5.86e-13,6;CL:0000677,5.86e-13,6;CL:0000584,5.86e-13,6;CL:0000075,5.13e-11,7;CL:0002076,2.33e-10,15;CL:0000066,2.43e-10,25;CL:0000682,1.90e-07,3;CL:0000223,2.21e-07,20;CL:0002250,6.13e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!5.50e-46!43;UBERON:0005409!1.24e-38!59;UBERON:0002108!6.59e-22!16;UBERON:0000344!1.98e-18!15;UBERON:0001264!1.09e-17!12;UBERON:0003922!1.09e-17!12;UBERON:0002114!1.09e-17!12;UBERON:0003923!1.09e-17!12;UBERON:0003924!1.09e-17!12;UBERON:0003921!1.09e-17!12;UBERON:0001007!8.97e-17!128;UBERON:0001555!8.97e-17!128;UBERON:0007026!8.97e-17!128;UBERON:0004119!2.72e-16!130;UBERON:0000925!2.72e-16!130;UBERON:0006595!2.72e-16!130;UBERON:0001045!4.94e-16!13;UBERON:0001242!1.25e-15!13;UBERON:0000060!1.25e-15!13;UBERON:0001262!1.25e-15!13;UBERON:0004786!1.25e-15!13;UBERON:0004921!5.11e-15!126;UBERON:0004185!5.11e-15!126;UBERON:0003350!1.39e-11!9;UBERON:0004808!1.39e-11!9;UBERON:0001277!1.39e-11!9;UBERON:0002075!2.07e-11!19;UBERON:0004923!2.66e-11!24;UBERON:0000485!4.49e-09!11;UBERON:0000481!2.22e-07!230|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.43e-28,12;UBERON:0000344,1.41e-26,15;UBERON:0000160,7.05e-25,31;UBERON:0001242,5.85e-22,13;UBERON:0001262,5.85e-22,13;UBERON:0004786,5.85e-22,13;UBERON:0003350,2.51e-18,9;UBERON:0004808,2.51e-18,9;UBERON:0001277,2.51e-18,9;UBERON:0002075,5.33e-17,19;UBERON:0004923,1.99e-15,24;UBERON:0005409,8.29e-15,47;UBERON:0000485,1.05e-14,11;UBERON:0002323,2.09e-07,37;UBERON:0004458,2.09e-07,37;UBERON:0003886,3.83e-07,38;UBERON:0002553,6.79e-07,39|phase1_expression=0,2.79180326111489,5.45999087267443,2.11724947914781,1.50268718983904,3.3575854382378,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,5.91971964335605,7.34109699414944,2.29692785646008,4.73838195774982,3.23206849028834,0.190023419456374,2.26827116783938,1.77384408524244,0,0,0,2.3108129580102,1.16364251750945,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,6.34681359992506,0,0,0.38660238396628,0.80673409849337,0.667134131534611,0.190225626112559,3.79623249235609,0.329397909448022,0.502670417600539,1.39269530428806,0.779856348476481,4.49409704327111,3.6743468478698,3.38540164532424,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.632365371242573,0.295220295959204,0.31399745568275,1.1105744752962,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,7.96470830039777,1.45668381692989,5.74414758233027,4.33791683438566,5.90603785761546,3.3817866273832,5.42699415653264,10.9060118843252,13.5469003786194,11.0612865277536,9.48767477174989,7.21948802737308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28702091574627,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.203319467126849,0.648032044930808,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0|short_description=p@chr16:93368659..93368676,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2176 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:93368659..93368676,+ | |||
|description=CAGE_peak_at_chr16:93368659..93368676,+ | |||
|id=chr16:93368659..93368676,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.39e-11!9;CL:0002251!1.39e-11!9;CL:0000239!2.26e-08!6;CL:0000677!2.26e-08!6;CL:0000212!2.26e-08!6;CL:0000584!2.26e-08!6;CL:0000075!5.04e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.51e-18,9;CL:0002251,2.51e-18,9;CL:0000239,5.86e-13,6;CL:0000677,5.86e-13,6;CL:0000584,5.86e-13,6;CL:0000075,5.13e-11,7;CL:0002076,2.33e-10,15;CL:0000066,2.43e-10,25;CL:0000682,1.90e-07,3;CL:0000223,2.21e-07,20;CL:0002250,6.13e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.50e-46!43;UBERON:0005409!1.24e-38!59;UBERON:0002108!6.59e-22!16;UBERON:0000344!1.98e-18!15;UBERON:0001264!1.09e-17!12;UBERON:0003922!1.09e-17!12;UBERON:0002114!1.09e-17!12;UBERON:0003923!1.09e-17!12;UBERON:0003924!1.09e-17!12;UBERON:0003921!1.09e-17!12;UBERON:0001007!8.97e-17!128;UBERON:0001555!8.97e-17!128;UBERON:0007026!8.97e-17!128;UBERON:0004119!2.72e-16!130;UBERON:0000925!2.72e-16!130;UBERON:0006595!2.72e-16!130;UBERON:0001045!4.94e-16!13;UBERON:0001242!1.25e-15!13;UBERON:0000060!1.25e-15!13;UBERON:0001262!1.25e-15!13;UBERON:0004786!1.25e-15!13;UBERON:0004921!5.11e-15!126;UBERON:0004185!5.11e-15!126;UBERON:0003350!1.39e-11!9;UBERON:0004808!1.39e-11!9;UBERON:0001277!1.39e-11!9;UBERON:0002075!2.07e-11!19;UBERON:0004923!2.66e-11!24;UBERON:0000485!4.49e-09!11;UBERON:0000481!2.22e-07!230 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001264,1.43e-28,12;UBERON:0000344,1.41e-26,15;UBERON:0000160,7.05e-25,31;UBERON:0001242,5.85e-22,13;UBERON:0001262,5.85e-22,13;UBERON:0004786,5.85e-22,13;UBERON:0003350,2.51e-18,9;UBERON:0004808,2.51e-18,9;UBERON:0001277,2.51e-18,9;UBERON:0002075,5.33e-17,19;UBERON:0004923,1.99e-15,24;UBERON:0005409,8.29e-15,47;UBERON:0000485,1.05e-14,11;UBERON:0002323,2.09e-07,37;UBERON:0004458,2.09e-07,37;UBERON:0003886,3.83e-07,38;UBERON:0002553,6.79e-07,39 | |||
|phase1_expression=0,2.79180326111489,5.45999087267443,2.11724947914781,1.50268718983904,3.3575854382378,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,5.91971964335605,7.34109699414944,2.29692785646008,4.73838195774982,3.23206849028834,0.190023419456374,2.26827116783938,1.77384408524244,0,0,0,2.3108129580102,1.16364251750945,2.6542016314108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29544417878937,6.34681359992506,0,0,0.38660238396628,0.80673409849337,0.667134131534611,0.190225626112559,3.79623249235609,0.329397909448022,0.502670417600539,1.39269530428806,0.779856348476481,4.49409704327111,3.6743468478698,3.38540164532424,0,0.114248512609729,0,0.203651327845314,0.193952487167626,0.140271639780637,0.632365371242573,0.295220295959204,0.31399745568275,1.1105744752962,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0.252578877947112,0,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0,0,0,0,0,7.96470830039777,1.45668381692989,5.74414758233027,4.33791683438566,5.90603785761546,3.3817866273832,5.42699415653264,10.9060118843252,13.5469003786194,11.0612865277536,9.48767477174989,7.21948802737308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.28702091574627,0,0,0.412773735926445,0,0,0,0,0,0,0,0,0,0.203319467126849,0.648032044930808,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p@chr16:93368659..93368676,+ | |||
}} |
Latest revision as of 05:36, 4 August 2015
Short description: | p@chr16:93368659..93368676, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:93368659..93368676, + |
Coexpression cluster: | MCL_coexpression_mm9:2176 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.51e-18 | 9 |
epithelial cell of alimentary canal | 2.51e-18 | 9 |
brush border epithelial cell | 5.86e-13 | 6 |
gut absorptive cell | 5.86e-13 | 6 |
enterocyte | 5.86e-13 | 6 |
columnar/cuboidal epithelial cell | 5.13e-11 | 7 |
endo-epithelial cell | 2.33e-10 | 15 |
epithelial cell | 2.43e-10 | 25 |
M cell of gut | 1.90e-07 | 3 |
endodermal cell | 2.21e-07 | 20 |
intestinal crypt stem cell | 6.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pancreas | 1.43e-28 | 12 |
mucosa | 1.41e-26 | 15 |
intestine | 7.05e-25 | 31 |
intestinal mucosa | 5.85e-22 | 13 |
wall of intestine | 5.85e-22 | 13 |
gastrointestinal system mucosa | 5.85e-22 | 13 |
epithelium of mucosa | 2.51e-18 | 9 |
gastrointestinal system epithelium | 2.51e-18 | 9 |
intestinal epithelium | 2.51e-18 | 9 |
viscus | 5.33e-17 | 19 |
organ component layer | 1.99e-15 | 24 |
gastrointestinal system | 8.29e-15 | 47 |
simple columnar epithelium | 1.05e-14 | 11 |
body cavity | 2.09e-07 | 37 |
body cavity or lining | 2.09e-07 | 37 |
body cavity precursor | 3.83e-07 | 38 |
anatomical cavity | 6.79e-07 | 39 |