FFCP PHASE1:Hg19::chr6:139489578..139489582,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C306 | |||
|description=CAGE_peak_at_chr6:139489578..139489582,+ | |||
|id=chr6:139489578..139489582,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.80e-41!140;CL:0000037!3.34e-36!172;CL:0000566!3.34e-36!172;CL:0000988!1.10e-33!182;CL:0002087!3.28e-33!119;CL:0002032!1.80e-32!165;CL:0000837!1.80e-32!165;CL:0002031!4.13e-32!124;CL:0002057!4.89e-24!42;CL:0000766!1.82e-22!76;CL:0000860!5.32e-22!45;CL:0002009!6.55e-18!65;CL:0000557!6.89e-18!71;CL:0000763!7.32e-18!112;CL:0000049!7.32e-18!112;CL:0000839!4.81e-17!70;CL:0002194!4.95e-17!63;CL:0000576!4.95e-17!63;CL:0000040!4.95e-17!63;CL:0000559!4.95e-17!63;CL:0000542!5.35e-14!53;CL:0000051!5.35e-14!53;CL:0000838!7.27e-14!52;CL:0000084!1.25e-10!25;CL:0000827!1.25e-10!25;CL:0000791!2.96e-09!18;CL:0000789!2.96e-09!18;CL:0002420!2.96e-09!18;CL:0002419!2.96e-09!18;CL:0000790!2.96e-09!18;CL:0000094!7.82e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-32;33!CL:0002057;1.33e-32;33!CL:0000473;4.14e-24;39!CL:0000234;4.14e-24;39!CL:0000576;2.59e-23;48!CL:0000766;2.44e-19;69!CL:0002087;2.88e-17;104!CL:0000791;4.82e-15;18!CL:0000789;4.82e-15;18!CL:0002419;4.82e-15;18!CL:0000094;3.83e-13;8!CL:0000084;1.50e-12;25!CL:0000738;5.02e-12;136!CL:0000625;1.63e-10;11!CL:0000542;1.66e-09;53!CL:0000763;2.14e-09;100!CL:0000081;5.09e-09;11!CL:0000988;1.90e-08;177!CL:0000236;1.86e-07;13!CL:0000624;2.71e-07;6!CL:0002393;5.77e-07;6!CL:0002397;5.77e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.19e-62,136;CL:0002087,3.97e-52,115;CL:0000037,6.63e-50,168;CL:0002031,3.77e-48,120;CL:0000988,5.17e-46,177;CL:0002032,5.48e-44,161;CL:0000837,5.48e-44,161;CL:0000766,6.24e-43,72;CL:0000860,7.60e-43,42;CL:0002057,7.60e-43,42;CL:0000473,5.10e-38,48;CL:0000234,5.10e-38,48;CL:0002009,2.23e-33,61;CL:0002194,5.32e-33,59;CL:0000576,5.32e-33,59;CL:0000040,5.32e-33,59;CL:0000559,5.32e-33,59;CL:0000557,2.42e-32,67;CL:0000839,3.13e-31,66;CL:0000763,7.22e-27,108;CL:0000049,7.22e-27,108;CL:0000838,9.12e-16,52;CL:0000542,2.63e-15,53;CL:0000051,2.63e-15,53;CL:0000791,2.94e-15,18;CL:0000789,2.94e-15,18;CL:0002420,2.94e-15,18;CL:0002419,2.94e-15,18;CL:0000790,2.94e-15,18;CL:0000094,4.36e-13,8;CL:0000084,1.64e-12,25;CL:0000827,1.64e-12,25;CL:0000134,1.38e-11,354;CL:0002320,6.37e-11,361;CL:0000625,1.32e-10,11;CL:0000219,4.45e-09,386;CL:0000081,5.56e-09,11;CL:0002393,3.52e-08,9;CL:0002397,3.52e-08,9;CL:0000624,1.95e-07,6;CL:0000236,8.15e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;7.91e-31;42!CL:0000790;4.82e-15;18!CL:0000051;1.66e-09;53!CL:0000049;2.57e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.00e-21!102;UBERON:0003061!1.00e-21!102;UBERON:0002193!5.09e-21!112;UBERON:0002371!3.89e-15!80;UBERON:0001474!4.43e-15!86;UBERON:0004765!1.88e-11!101;UBERON:0001434!1.88e-11!101;UBERON:0002405!5.84e-09!115;UBERON:0000178!2.71e-08!15;UBERON:0000179!2.71e-08!15;UBERON:0000463!2.71e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.53e-13;15!UBERON:0000179;8.53e-13;15!UBERON:0000463;8.53e-13;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.37e-37,98;UBERON:0003061,8.37e-37,98;UBERON:0002193,4.79e-33,108;UBERON:0002371,2.52e-28,76;UBERON:0001474,3.16e-25,82;UBERON:0002405,7.95e-23,93;UBERON:0004765,9.34e-22,90;UBERON:0001434,3.12e-18,100;UBERON:0000178,1.00e-12,15;UBERON:0000179,1.00e-12,15;UBERON:0000463,1.00e-12,15;UBERON:0002384,1.85e-10,371;UBERON:0003081,2.73e-10,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0,0,0.136874425072884,0.251085279189606,0.0764134057479513,0,0.157421562627358,5.11373559903575,1.15148819429164,4.33485145285013,0,0,0,0.46480320348181,0.710846162437108,1.76160263600908,6.64794490238253,13.0353890855592,6.2933152507597,0.447830948479849,1.94336199611388,0.257575567634187,3.78035420826868,1.51150377475524,5.09426528494414,7.43772918098191,6.16751832032739,3.40677007984614,3.16461631554365,1.0246428261164,1.89185783910868,3.44745680736619,3.87290810150296,1.35426486594342,4.32957380947991,1.36453075028923,1.34834090667051,4.59125838556354,1.92557416245656,1.91801137739712,4.28806690242731,3.78980949481101,1.27867425159808,6.67481248845743,2.26954089876456,3.73693349397345,3.51748131359441,3.12889751052121,0.868755378820466,3.63239701580021,0.736555271975129,2.21523671208619,0.422510572623884,3.61427309940574,1.88692780957538,1.12328631146495,2.25265339262259,1.28580469357664,0.855038231223746,2.78483348078726,2.19196984517561,3.51992488922645,1.09227722252426,0,1.28019066769952,0.400395987036012,0.574752439954483,1.32208974556972,1.90810750907073,4.55370375287559,2.93618594685469,7.64546456250458,2.64342657158052,1.68152568894461,0.263384084775077,7.08155172409799,26.7247318669432,14.1865034309661,0.334372990781356,1.95553359980154,4.73447805734733,3.89653456815823,0.668462741311041,6.48132996444642,5.98141515375777,3.79125409271022,4.99556146930133,3.51160238411671,4.60426132890293,4.69795030235942,0,2.22429844743091,6.1534390460634,3.1360657141493,0.566546713487831,0.766440987203842,3.09264700934367,2.78321661221453,3.50421955756506,3.90650072313851,2.85135613334512,1.20460095262218,0.76791966692651,2.49861453104692,2.8413270245282,0,6.45141578319144,17.918493117495,8.54463982908514,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0.221729397462564,0.175669571386252,0.196468613246569,0,0,1.29818957461873,0.174129737299267,0.398873881556595,2.38490624305342,0.571994910780128,1.11437250398869,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,7.9068250461638,19.3890132074163,0,0.496971951695318,0,0.397227542439656,0.573673241497627,0,0,0,0.24666754841716,0,0,0.326923806226917,0,0,0.234321431833797,0,0,0,0,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0,0,0.718618141816238,0.336672227908132,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.506328996723799,0,0.252433774244115,0.184099797284599,0,0.355009592516614,0,0,0,0,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0,2.20731549707325,0.122988438543114,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,1.96973604869918,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0.268675568108545,0,0,0,0.44024217006613,0.621984346622316,1.29707958075265,1.38866676769018,0.063497894292169,0,0,1.71072446022705,0.102827492703324,0.300343057843917,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.112085143993527,5.31983052545203,13.1532820664306,6.54549485026717,0.254094624222463,0,0,0,0,7.49007023947182,23.932916736322,3.72973962092432,0,0,0.271265023699736,1.24782516918484,0.892144943985809,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0,0,5.58273670531796,11.6485668442053,6.29692591040322,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0.232420756919918,0,0.200506470303285,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0.732555718546747,0.330037999682352,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.275673144969061,0,0.290033387828457,0.255679882248303,0.0890320356467374,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,1.01489521846434,1.52927441428475,2.27858874869665,2.38231775457789,2.46817363851717,3.24236655596359,2.70015718619057,5.55187623405989,0,0.962479855263359,0.735120647943095,0.371606350251437,0,0.640276590135727,0.159426272728822,0.199579371432817,0,0.423347165447766,0,0.561594356226918,0.684704037099577,0.47003968731907,2.50634477090067,0.338583555603207,0.321176150207399,1.21079824314629,0.425846237690326,0.343505344755765,0,0,0,0.976940477010201,0,0,0.270455678475983,0.99921590399346,0,0,0,0,1.00299045849731,0.284136146806413,0.47748896947538,0.296964680832639,0.307160702099232,0.994147647766298,0,0,0.659215496907038,0,0.19924798825107,1.10513566212459,0.251932747854276,0.20453736500431,0.123084805461069,0.311039587661807,0,0.179021174675609,0,0.197286811273867,4.7896618469388,0,0.969332746095218,0,0,1.30213880542617,0.262379999988587,0,0,0.254253650292766,0.709163045303809,1.03423011972439,2.62444152044929,0.173624994933292,0,0.361789315876224,0,0.331737779793674,0.295547618953547,0.219385397153973,0.21787692703798,0.139423744278603,0.153900517007594,0,0.23056390438806,0.179515288819544,0,0.31900115973192,0.183195186803725,0.533034776018635,1.02193298195737,0.31396051279005,0.166211681900156,0,0,0,0,0,0.210998064528027,0.163232808159148,0.141353071433941,0.216388639742091,0.995261931078505,0.707660516026713,4.27721101453538,0.296521128680622,0.617819694732514,0.208843899010911,0.134802265961354,0,0,1.094728735294,0.391329237864179,0.242780379534093,0.394584402849391,0,0.91821828489147,0.442306057399416,0,0.103688191397247,0.664653872707185,0.330991955875499,0,0,0,0.138674673013139,0,0.293977192243133,0.0870592065804026,0.698906672968121,0.171986032471617,0,0.146178634172371,0.0821154570532092,0.290967049465258,0,0.677942222341597,0.137041924646751,0.19871461170299,0.189932387867636,0,0,0.640358984218058,0,0,0,0.514784993585894,0.288109595976299,0.248505071130865,0,0.135904206073614,0.209205692624666,0.101998217636322,0.288950589901519,0.600420288709789,0.273810757783986,0,0,0.525774708558629,0.558564802544508,0,0.717873024576814,0.399358000997982,0,0,0.335917362433631,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,0.136203406111576,0.321506296930038,0,0.415440338029185,0.899895566206002,3.0952078182318,0.242998226632099,0.335434687599266,0.0788057072991982,0.157363764404994,0.105600336519406,0,0.383830394638891,0.714695326373367,0.662091970365432,0,0,0,0,0,0.082092520749339,1.02232813071253,0.113312091520126,0,0,0.646414781807753,0,0,0,0.106787412567695,0.471612915298998,1.24271716604159,1.48849806543585,0.790446527591777,0.121792598380896,1.27668251554036,0,0,0,0.327872630709804,0.314108192500469,0,0,0.250381861413,1.14681839138014,0.110929051536852,0.310482014706917,0.415045904808692,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0.889811221596536,0,0.302461847526478,0,0.147855149989634,0,0,0,0,0,1.04349012362347,0,0,0,0,0,0,0,0.400027764663154,0,0.336749488765919,0,0,0.214441591374926,0,0.226705925512272,0.463044948647668,0.244736704506468,0,0,0.219284049578707,0.176689145945881,0,0,0.256241518587947,0,0,0.276516872303462,0,0.265729680626726,0.163565394255844,0.327609848846413,0.245772908753719,0,0.79994958341972,0.533458648470704,0,0.567515953566836,0,0,0,0.255788742607303,0,0.471797825567689,0,0,1.2754495206101,1.61116493536703,0.558644917973244,0.318004350653419,0.394308725006267,0.80057074828547,0.705351887381368,0,0,0,1.11743701340006,0,1.51243017733031,0.207471757392654,0.484426936895553,1.42769420259154,0.0981477185010256,0.471878893390961,0.366857197043358,0,0,0,0.795664888465099,0.0752103283492573,0.20170506870352,0.781514011233092,0.523813388962845,0.163771917510097,0.591424344868181,0.202612753855184,0.781078098613847,0.620060389503552,0.0634158101939068,1.09394961803644,0,0.496211178389294,1.75871244359621,0.383287282918786,0,0,0,0,0.177404740325278,0.460935950223117,0.514464028312255,0.0679697329768317,0.197318320688547,0.118193840883968,0,0.078493092850514,0.471346769748006,0,0,0,0,0.142953088353313,0,0.23248285073625,0.173858272302579,0,0,0.3414369541879,0,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0,0,0.894843454382338,0.098150233615243,0.243835849964539,0.647428837187895,0,1.1598144313382,0.971421986118279,0.233939463462106,1.39265542612958,0,0.79062257427272,0.109940516745429,1.05673990496671,0.848915739187391,0.437119121007915,0.940634592723046,0,0,0,0.297046400327086,0.8453114551668,0,0.375935671919414,0.193373663920732,0,0,0.705789743431384,0.0802413666891683,2.92134555298607,0.458729283404541,0,0.473314686579554,0.135982980381829,0,2.1161073620616,0,0,0.865253124247578,0,0.109265571963696,0,0.917899467677836,0.26721740526556,0.18378979906969,0.250707539292375,0.227336094654718,1.07185652062471,0,0.20686599172379,0.852935927603924,0,0.387533459016037,1.05527014302958,0.224263725161227,0.0636471582781649,0.202117188958219,0.435433495793923,0,0.5388164241167,0.286888821570705,0.99798106963804,0.407016343054873,0.320182037633146,0,0.359300808426348,2.34640942403454,0.366724332548599,0,0.665756774185513,1.00636896795513,0.961705476909699 | |||
|short_description=p@chr6:139489578..139489582,+ | |||
}} |
Revision as of 14:16, 22 January 2014
Short description: | p@chr6:139489578..139489582, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:139489578..139489582, + |
Coexpression cluster: | C306_CD4_CD8_Neutrophils_Natural_CD19_CD14_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.37e-37 | 98 |
blood island | 8.37e-37 | 98 |
hemolymphoid system | 4.79e-33 | 108 |
bone marrow | 2.52e-28 | 76 |
bone element | 3.16e-25 | 82 |
immune system | 7.95e-23 | 93 |
skeletal element | 9.34e-22 | 90 |
skeletal system | 3.12e-18 | 100 |
blood | 1.00e-12 | 15 |
haemolymphatic fluid | 1.00e-12 | 15 |
organism substance | 1.00e-12 | 15 |
connective tissue | 1.85e-10 | 371 |
lateral plate mesoderm | 2.73e-10 | 203 |