FFCP PHASE1:Hg19::chr7:33945106..33945116,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=168667 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24154 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N8U9 | |||
|association_with_transcript=0bp_to_ENST00000426693,ENST00000496609_5end | |||
|coexpression_cluster_id=C4684 | |||
|description=CAGE_peak_3_at_BMPER_5end | |||
|id=chr7:33945106..33945116,+ | |||
|ontology_enrichment_celltype=CL:0000055!4.69e-30!180;CL:0000057!2.93e-20!75;CL:0000192!5.00e-18!42;CL:0000514!5.00e-18!42;CL:0000680!7.35e-18!57;CL:0000056!7.35e-18!57;CL:0000355!7.35e-18!57;CL:0000187!7.71e-18!54;CL:0000359!3.57e-17!32;CL:0000183!7.10e-16!59;CL:0000393!3.87e-15!60;CL:0000211!3.87e-15!60;CL:0002620!9.25e-14!23;CL:0002494!3.69e-10!16;CL:0002539!9.87e-08!10;CL:0000222!6.53e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.08e-18;32!CL:0002539;5.14e-14;10!CL:0002620;5.95e-14;23!CL:0000192;6.32e-13;43!CL:0002494;1.43e-12;16!CL:1000306;8.94e-10;4!CL:0002547;8.94e-10;4!CL:0002592;7.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,4.53e-20,32;CL:0000057,7.09e-18,76;CL:0000192,6.29e-17,43;CL:0000514,6.29e-17,43;CL:0002539,2.68e-14,10;CL:0002620,5.78e-14,23;CL:0000187,1.52e-13,55;CL:0000680,1.53e-12,58;CL:0000056,1.53e-12,58;CL:0000355,1.53e-12,58;CL:0002494,1.87e-12,16;CL:0000393,1.21e-11,61;CL:0000211,1.21e-11,61;CL:0000048,3.73e-11,427;CL:0000723,9.37e-11,433;CL:0000034,3.07e-10,441;CL:1000306,1.46e-09,4;CL:0002547,1.46e-09,4;CL:0002592,9.28e-08,3;CL:0000135,7.07e-07,3;CL:0000388,7.07e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000514;6.32e-13;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;5.74e-12;5!DOID:450;5.74e-12;5!DOID:66;5.74e-12;5!DOID:423;5.74e-12;5!DOID:0080000;5.74e-12;5!DOID:11722;5.74e-12;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,6.22e-12,5;DOID:450,6.22e-12,5;DOID:66,6.22e-12,5;DOID:423,6.22e-12,5;DOID:0080000,6.22e-12,5;DOID:11722,6.22e-12,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!3.43e-18!70;UBERON:0000914!6.35e-18!83;UBERON:0002329!6.35e-18!83;UBERON:0003077!6.35e-18!83;UBERON:0003059!6.35e-18!83;UBERON:0007282!6.35e-18!83;UBERON:0009618!6.35e-18!83;UBERON:0007285!6.35e-18!83;UBERON:0004872!2.37e-17!84;UBERON:0000486!2.63e-16!82;UBERON:0001134!1.37e-15!61;UBERON:0002036!1.37e-15!61;UBERON:0003082!1.37e-15!61;UBERON:0002385!3.36e-15!63;UBERON:0001015!3.36e-15!63;UBERON:0000383!3.36e-15!63;UBERON:0001637!4.86e-14!42;UBERON:0003509!4.86e-14!42;UBERON:0004572!4.86e-14!42;UBERON:0004573!3.40e-13!33;UBERON:0004571!3.40e-13!33;UBERON:0000475!1.21e-12!365;UBERON:0001981!1.71e-12!60;UBERON:0007500!1.71e-12!60;UBERON:0004537!1.71e-12!60;UBERON:0006965!1.71e-12!60;UBERON:0000025!3.53e-12!194;UBERON:0000948!5.27e-12!24;UBERON:0005498!5.27e-12!24;UBERON:0004140!5.27e-12!24;UBERON:0009881!5.27e-12!24;UBERON:0004141!5.27e-12!24;UBERON:0003084!5.27e-12!24;UBERON:0007005!5.27e-12!24;UBERON:0004139!5.27e-12!24;UBERON:0004291!5.27e-12!24;UBERON:0007100!1.54e-11!27;UBERON:0002199!3.53e-11!45;UBERON:0002416!3.53e-11!45;UBERON:0003914!4.47e-11!118;UBERON:0000055!1.42e-10!69;UBERON:0005256!6.20e-10!143;UBERON:0000483!1.16e-09!309;UBERON:0002097!1.57e-09!40;UBERON:0004111!2.81e-09!241;UBERON:0000119!3.01e-09!312;UBERON:0000477!5.83e-09!286;UBERON:0001009!6.38e-09!113;UBERON:0004535!8.50e-09!110;UBERON:0000468!1.64e-08!659;UBERON:0002049!4.09e-08!79;UBERON:0007798!4.09e-08!79;UBERON:0000481!5.32e-08!347;UBERON:0004237!9.87e-08!10;UBERON:0004695!9.87e-08!10;UBERON:0002111!9.87e-08!10;UBERON:0004178!9.87e-08!10;UBERON:0002100!1.74e-07!216;UBERON:0001135!6.04e-07!15;UBERON:0003102!9.79e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;3.63e-21;33!UBERON:0004571;3.63e-21;33!UBERON:0001637;6.15e-15;42!UBERON:0003509;6.15e-15;42!UBERON:0004572;6.15e-15;42!UBERON:0004237;5.14e-14;10!UBERON:0004695;5.14e-14;10!UBERON:0002111;5.14e-14;10!UBERON:0004178;5.14e-14;10!UBERON:0000947;1.56e-13;21!UBERON:0010191;1.56e-13;21!UBERON:0004797;8.94e-10;4!UBERON:0000415;8.94e-10;4!UBERON:0007240;8.94e-10;4!UBERON:0005742;8.94e-10;4!UBERON:0005734;8.94e-10;4!UBERON:0004664;8.94e-10;4!UBERON:0004663;8.94e-10;4!UBERON:0002199;3.40e-09;46!UBERON:0002416;3.40e-09;46!UBERON:0007500;4.65e-09;56!UBERON:0001981;4.65e-09;56!UBERON:0004537;4.65e-09;56!UBERON:0001135;8.22e-09;15!UBERON:0000948;1.56e-08;22!UBERON:0003498;7.76e-08;3!UBERON:0005985;7.76e-08;3!UBERON:0001621;7.76e-08;3!UBERON:0002097;1.08e-07;41!UBERON:0007100;2.96e-07;25!UBERON:0003102;5.22e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,4.02e-24,33;UBERON:0004571,4.02e-24,33;UBERON:0001637,8.78e-20,42;UBERON:0003509,8.78e-20,42;UBERON:0004572,8.78e-20,42;UBERON:0004872,6.71e-16,83;UBERON:0004237,2.68e-14,10;UBERON:0004695,2.68e-14,10;UBERON:0002111,2.68e-14,10;UBERON:0004178,2.68e-14,10;UBERON:0007500,9.94e-14,59;UBERON:0001981,9.94e-14,59;UBERON:0004537,9.94e-14,59;UBERON:0006965,9.94e-14,59;UBERON:0002329,1.03e-13,71;UBERON:0003059,1.03e-13,71;UBERON:0007282,1.03e-13,71;UBERON:0004290,1.03e-13,71;UBERON:0009618,1.03e-13,71;UBERON:0000947,1.30e-13,21;UBERON:0010191,1.30e-13,21;UBERON:0003077,2.00e-13,72;UBERON:0007285,2.00e-13,72;UBERON:0007524,3.79e-13,73;UBERON:0000486,4.11e-13,83;UBERON:0002199,1.20e-12,46;UBERON:0002416,1.20e-12,46;UBERON:0007503,7.18e-12,78;UBERON:0003914,1.27e-11,117;UBERON:0001134,2.30e-11,62;UBERON:0002036,2.30e-11,62;UBERON:0003082,2.30e-11,62;UBERON:0000055,4.12e-11,68;UBERON:0002385,7.83e-11,64;UBERON:0001015,7.83e-11,64;UBERON:0000383,7.83e-11,64;UBERON:0004535,3.17e-10,109;UBERON:0002097,3.26e-10,41;UBERON:0001009,9.46e-10,112;UBERON:0000415,1.46e-09,4;UBERON:0007240,1.46e-09,4;UBERON:0005742,1.46e-09,4;UBERON:0005734,1.46e-09,4;UBERON:0004664,1.46e-09,4;UBERON:0004663,1.46e-09,4;UBERON:0000948,2.50e-09,24;UBERON:0005498,2.50e-09,24;UBERON:0004140,2.50e-09,24;UBERON:0009881,2.50e-09,24;UBERON:0004141,2.50e-09,24;UBERON:0003084,2.50e-09,24;UBERON:0007005,2.50e-09,24;UBERON:0004139,2.50e-09,24;UBERON:0004291,2.50e-09,24;UBERON:0001135,5.45e-09,15;UBERON:0002049,6.04e-09,78;UBERON:0007798,6.04e-09,78;UBERON:0007100,5.12e-08,27;UBERON:0003498,6.32e-08,5;UBERON:0005985,6.32e-08,5;UBERON:0001621,9.28e-08,3;UBERON:0005256,2.59e-07,122;UBERON:0007846,7.07e-07,3;UBERON:0000043,7.07e-07,3;UBERON:0007845,7.07e-07,3 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.281908808191942,0,0.446961094427288,0,0,0.631719873426831,2.61185628199839,0.982935746006035,0,0,0,0,0.331397375727916,0,1.80808358407193,2.19093027116212,2.43966399395253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,0.383587685530591,4.69870898099936,1.50401373190767,0.434539556882471,0,0.973269740605272,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,2.15271869829786,3.83986624358335,5.16305917347865,1.06400514659507,0.560677600142307,0,0.74000264525148,3.11211035399766,1.21239604862719,7.02886183387873,0,0,0.468642863667593,0,0.570471821544449,0.298897361103602,1.29177948508141,1.78060238804945,0.98315564691574,0,0.122834317311768,0.103325781175765,0,0.741800787835671,0.910161361938026,0.718618141816238,0.168336113954066,0,0,1.31693286264251,1.22595118319608,0.45071417671979,0.567160915800105,2.69084453533293,2.34913127700424,3.39091041855299,3.00091096084402,2.26715564324566,1.03056216018252,0.37223371266318,2.70042131586026,0.487185025805993,3.78650661366172,4.51044503347267,2.58633690910099,2.4850671476163,0.503760491138201,0.508681776931463,0.193260853163297,0,0,0,0,0.580969714347592,0.10366105501537,0.252320850875628,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0.651616610620649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58543431515556,0,0,0,0,0,0,0,0,0,0,0,0.710783897485092,2.37585561880029,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0,0.892144943985809,0,0,0,0,0,0.664225598535437,0,1.82455590382974,0,0,0,0,0,0.303127571446259,0,0,0,1.84154367945675,0.561320188866147,0.256278298511402,0.511707249066704,0.321707842287215,0,1.23367755042124,1.24293207719189,0.98552587216571,0,1.39452454151951,0,0,0,0.803701137152247,0,0,0,0,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0.650060246036521,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0,0.290033387828457,0,0.267096106940212,0,0,0.510450849978337,0,0.929691098594572,5.66662224295152,2.7881490806424,11.0892088863392,7.98459045475533,1.73986598415015,0.55597265731176,4.57999637574372,0,0,0.571890581771475,0,0.855877976067841,4.45484547096312,0.78494864019923,0.899362287916574,0,0.589062011728432,8.28948174450596,3.17020642346017,1.26377536871694,0.975267478179181,9.01739911635752,0,0.136499911407986,1.41405431953713,3.39024349860728,7.71911480964574,0.66343897524122,4.82295973779139,0,1.31178950409327,0.811641507850816,0.6196469961995,0.281695602532241,0.717056761020258,2.06322986127554,0.7133421029625,0.354761064070598,2.74439925886963,0.658589785919804,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0.552567831062295,0,1.22722419002586,0,3.11039587661807,0,0,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0,1.44999915086959,0,0,0.472775363535873,0,0.583209226766509,0,0,0.120596438625408,0,1.10579259931225,0.886642856860642,0.658156191461918,0,0,0.230850775511391,0.455768223388005,0,0,0,1.27600463892768,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.949661939338181,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28929632425987,0,0.558564802544508,0.229160424011684,0.717873024576814,0.199679000498991,0,0.223171457441873,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.789744236554321,0,0.157611414598396,0.314727528809989,0,0,0,0,0.662091970365432,0,2.17199840701485,0.864221491201268,1.95952416065645,0,0,0.170388021785422,0.339936274560377,0.293104467356165,2.65013777824443,0,0.13223260174269,0,0,0.640724475406168,5.03053776318931,0.828478110694391,0.496166021811951,0,0,0,0,0.2506898940227,0.306345576763462,0,0,0.886068179966986,0.488105059607853,0.500763722825999,0,0.110929051536852,0.18628920882415,0,0.37494122388632,0,0,0.470531639396343,0,0,0.149254802886874,0.233713309847224,2.77402930751307,2.84104507912634,0.251567901752575,0.889811221596536,0.228840068396924,1.36107831386915,1.39893480524502,2.36568239983414,0.796483835818512,0,0.310525913752519,4.14706207840855,0.53168342911599,0.521745061811734,1.05180326298053,7.61610424337591,2.03435366602331,0.909243296012797,1.50374779859484,0,0,0,0,0.673498977531838,2.52369796457302,0,0,0,0,0,0.734210113519403,0,0,0.438568099157414,0.883445729729405,0.192914038270915,0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| |||
|short_description=p3@BMPER | |||
}} |
Revision as of 16:28, 22 January 2014
Short description: | p3@BMPER |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BMPER_5end |
Coexpression cluster: | C4684_Smooth_lung_Fibroblast_mesenchymal_Chondrocyte_basal_mesodermal |
Association with transcript: | 0bp_to_ENST00000426693, ENST00000496609_5end |
EntrezGene: | BMPER |
HGNC: | 24154 |
UniProt: | Q8N8U9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 4.53e-20 | 32 |
fibroblast | 7.09e-18 | 76 |
smooth muscle cell | 6.29e-17 | 43 |
smooth muscle myoblast | 6.29e-17 | 43 |
aortic smooth muscle cell | 2.68e-14 | 10 |
skin fibroblast | 5.78e-14 | 23 |
muscle cell | 1.52e-13 | 55 |
muscle precursor cell | 1.53e-12 | 58 |
myoblast | 1.53e-12 | 58 |
multi-potent skeletal muscle stem cell | 1.53e-12 | 58 |
cardiocyte | 1.87e-12 | 16 |
electrically responsive cell | 1.21e-11 | 61 |
electrically active cell | 1.21e-11 | 61 |
multi fate stem cell | 3.73e-11 | 427 |
somatic stem cell | 9.37e-11 | 433 |
stem cell | 3.07e-10 | 441 |
fibroblast of tunica adventitia of artery | 1.46e-09 | 4 |
fibroblast of the aortic adventitia | 1.46e-09 | 4 |
smooth muscle cell of the coronary artery | 9.28e-08 | 3 |
fibrocyte | 7.07e-07 | 3 |
tendon cell | 7.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.22e-12 | 5 |
myotonic disease | 6.22e-12 | 5 |
muscle tissue disease | 6.22e-12 | 5 |
myopathy | 6.22e-12 | 5 |
muscular disease | 6.22e-12 | 5 |
myotonic dystrophy | 6.22e-12 | 5 |