FFCP PHASE1:Hg19::chr6:31324943..31324963,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=3106 | |EntrezGene=entrezgene:3106 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4932 | |HGNC=HGNC:4932 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=P01889,P30480,P30486,Q29836,Q31610,Q31612,B4DUK6,F5H017 | |UniProt=uniprot:P01889,uniprot:P30480,uniprot:P30486,uniprot:Q29836,uniprot:Q31610,uniprot:Q31612,uniprot:B4DUK6,uniprot:F5H017 | ||
|association_with_transcript=0bp_to_ENST00000412585,ENST00000428231,ENST00000452596,ENST00000498007_5end | |association_with_transcript=0bp_to_ENST00000412585,ENST00000428231,ENST00000452596,ENST00000498007_5end | ||
|cluster_id=chr6:31324943..31324963,- | |||
|coexpression_cluster_id=C4591 | |coexpression_cluster_id=C4591 | ||
|description=CAGE_peak_1_at_HLA-B_5end | |description=CAGE_peak_1_at_HLA-B_5end |
Revision as of 23:51, 30 July 2015
Short description: | p1@HLA-B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HLA-B_5end |
Coexpression cluster: | C4591_Neutrophils_Basophils_Eosinophils_migratory_CD14_CD4_CD8 |
Association with transcript: | 0bp_to_ENST00000412585, ENST00000428231, ENST00000452596, ENST00000498007_5end |
EntrezGene: | 3106 |
HGNC: | 4932 |
UniProt: | P01889P30480P30486Q29836Q31610Q31612B4DUK6F5H017 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@HLA-B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.60e-46 | 136 |
nongranular leukocyte | 1.47e-40 | 115 |
hematopoietic lineage restricted progenitor cell | 2.15e-36 | 120 |
hematopoietic stem cell | 3.45e-31 | 168 |
hematopoietic cell | 2.18e-30 | 177 |
myeloid leukocyte | 7.15e-30 | 72 |
hematopoietic oligopotent progenitor cell | 8.40e-30 | 161 |
hematopoietic multipotent progenitor cell | 8.40e-30 | 161 |
defensive cell | 7.95e-28 | 48 |
phagocyte | 7.95e-28 | 48 |
Showing 1 to 10 of 37 entries
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.15e-34 | 108 |
hematopoietic system | 2.24e-33 | 98 |
blood island | 2.24e-33 | 98 |
immune system | 1.59e-26 | 93 |
bone marrow | 1.50e-23 | 76 |
bone element | 5.35e-21 | 82 |
lateral plate mesoderm | 1.44e-17 | 203 |
skeletal element | 1.93e-16 | 90 |
skeletal system | 2.90e-13 | 100 |
connective tissue | 1.12e-10 | 371 |
Showing 1 to 10 of 17 entries