FFCP PHASE1:Hg19::chrX:13835312..13835321,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=2824 | |EntrezGene=entrezgene:2824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4461 | |HGNC=HGNC:4461 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q13491,Q8N956 | |UniProt=uniprot:Q13491,uniprot:Q8N956 | ||
|association_with_transcript=0bp_to_NM_001001995,NM_001001996,NM_005278,uc004cvw.2,uc004cvy.2,uc004cvz.2,uc011mim.1_5end | |association_with_transcript=0bp_to_NM_001001995,NM_001001996,NM_005278,uc004cvw.2,uc004cvy.2,uc004cvz.2,uc011mim.1_5end | ||
|cluster_id=chrX:13835312..13835321,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_9_at_GPM6B_5end | |description=CAGE_peak_9_at_GPM6B_5end | ||
Revision as of 06:10, 1 August 2015
| Short description: | p9@GPM6B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_GPM6B_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_NM_001001995, NM_001001996, NM_005278, uc004cvw.2, uc004cvy.2, uc004cvz.2, uc011mim.1_5end |
| EntrezGene: | 2824 |
| HGNC: | 4461 |
| UniProt: | Q13491Q8N956 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@GPM6B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| astrocyte of the cerebral cortex | 3.86e-11 | 3 |
Showing 1 to 1 of 1 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 4.26e-136 | 56 |
| neural rod | 4.26e-136 | 56 |
| future spinal cord | 4.26e-136 | 56 |
| neural keel | 4.26e-136 | 56 |
| regional part of nervous system | 2.47e-126 | 53 |
| regional part of brain | 2.47e-126 | 53 |
| regional part of forebrain | 8.87e-118 | 41 |
| forebrain | 8.87e-118 | 41 |
| anterior neural tube | 8.87e-118 | 41 |
| future forebrain | 8.87e-118 | 41 |
Showing 1 to 10 of 98 entries
