UBERON:0002078: Difference between revisions
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|is_obsolete= | |is_obsolete= | ||
|located_in= | |located_in= | ||
|name=right atrium | |name=right cardiac atrium | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of= | |part_of= | ||
Latest revision as of 17:25, 12 September 2014
| Name: | right cardiac atrium | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Right cardiac chamber which is continuous with the superior vena cava and inferior vena cava.[FMA]" [FMA:FMA, Wikipedia:Right_atrium] | ||
| Xrefs: |
| ||
| Synonyms: |
"atrium dextrum" RELATED LATIN [Wikipedia:Right_atrium] "cardiac right atrium" EXACT [] "heart right atrium" EXACT [] "right atrium of heart" EXACT [] "right cardiac atrium" EXACT [] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_7096-MA_0000075 | ||
| Subset: | uberon_slim |
200px-Diagram_of_the_human_heart_%28cropped%29.svg.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002081(cardiac atrium),UBERON:0015212(lateral structure) |
|---|
Children
| part of: | UBERON:0005208 (right atrium valve),UBERON:0005965 (outflow part of right atrium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10207-103F9 (heart - tricuspid valve, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002078 (right cardiac atrium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE1:Hg19::chr15:86272097..86272099,+#_73c76a45228944cfbcf173379dd9711c | p@chr15:86272097..86272099, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr5:99390735..99390743,-#_73c76a45228944cfbcf173379dd9711c | p@chr5:99390735..99390743, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr5:99390735..99390743,-#_73c76a45228944cfbcf173379dd9711c | p@chr5:99390735..99390743, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr15:86272097..86272099,+#_73c76a45228944cfbcf173379dd9711c | p@chr15:86272097..86272099, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:92678409..92678410,-#_73c76a45228944cfbcf173379dd9711c | p@chr10:92678409..92678410, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:92678409..92678410,-#_73c76a45228944cfbcf173379dd9711c | p@chr10:92678409..92678410, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_6afdd469a18e1197be43e9c9fdc2e49d | p@chr2:179656442..179656451, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:97501400..97501407,-#_6afdd469a18e1197be43e9c9fdc2e49d | p16@ASNS |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_6afdd469a18e1197be43e9c9fdc2e49d | p@chr2:179656442..179656451, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:97501400..97501407,-#_6afdd469a18e1197be43e9c9fdc2e49d | p16@ASNS |
| 2.55e-98 | FFCP PHASE2:Hg19::chr14:68375236..68375240,+#_4d6b84afac559fdf6a3e7058aacfc675 | p9@RAD51B |
| 2.55e-98 | FFCP PHASE1:Hg19::chr5:157747715..157747717,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr5:157747715..157747717, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:39821929..39821932,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr18:39821929..39821932, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chrX:136514398..136514433,-#_4d6b84afac559fdf6a3e7058aacfc675 | p@chrX:136514398..136514433, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chrX:136514398..136514433,-#_4d6b84afac559fdf6a3e7058aacfc675 | p@chrX:136514398..136514433, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr22:36000901..36000903, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr22:36000901..36000903, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr14:68375236..68375240,+#_4d6b84afac559fdf6a3e7058aacfc675 | p9@RAD51B |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:70647888..70647891,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr6:70647888..70647891, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr18:4003453..4003457,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr18:4003453..4003457, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:103287330..103287331,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr2:103287330..103287331, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr6:104898467..104898469,-#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr6:104898467..104898469, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:70647888..70647891,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr6:70647888..70647891, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:4003453..4003457,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr18:4003453..4003457, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr8:24530708..24530710,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr8:24530708..24530710, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:103287330..103287331,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr2:103287330..103287331, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:104898467..104898469,-#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr6:104898467..104898469, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr8:24530708..24530710,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr8:24530708..24530710, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr5:157747715..157747717,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr5:157747715..157747717, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr18:39821929..39821932,+#_4d6b84afac559fdf6a3e7058aacfc675 | p@chr18:39821929..39821932, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr19:35531882..35531893,-#_0bcb74ca5e732112580c17562abc51e9 | p@chr19:35531882..35531893, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:218844837..218844842,-#_0bcb74ca5e732112580c17562abc51e9 | p@chr2:218844837..218844842, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr19:35531882..35531893,-#_0bcb74ca5e732112580c17562abc51e9 | p@chr19:35531882..35531893, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:218844837..218844842,-#_0bcb74ca5e732112580c17562abc51e9 | p@chr2:218844837..218844842, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr16:10783399..10783401,+#_0bcb74ca5e732112580c17562abc51e9 | p@chr16:10783399..10783401, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr17:77026478..77026512,+#_0bcb74ca5e732112580c17562abc51e9 | p@chr17:77026478..77026512, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr14:30786806..30786810,-#_0bcb74ca5e732112580c17562abc51e9 | p@chr14:30786806..30786810, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:123518588..123518591,+#_0bcb74ca5e732112580c17562abc51e9 | p@chr2:123518588..123518591, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr17:77026478..77026512,+#_0bcb74ca5e732112580c17562abc51e9 | p@chr17:77026478..77026512, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:123518588..123518591,+#_0bcb74ca5e732112580c17562abc51e9 | p@chr2:123518588..123518591, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr16:10783399..10783401,+#_0bcb74ca5e732112580c17562abc51e9 | p@chr16:10783399..10783401, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr2:26508626..26508627,+#_0bcb74ca5e732112580c17562abc51e9 | p@chr2:26508626..26508627, + |
| 1.23e-66 | FFCP PHASE1:Hg19::chr2:26508626..26508627,+#_0bcb74ca5e732112580c17562abc51e9 | p@chr2:26508626..26508627, + |
| 1.23e-66 | FFCP PHASE2:Hg19::chr5:99385820..99385831,-#_0bcb74ca5e732112580c17562abc51e9 | p@chr5:99385820..99385831, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr14:30786806..30786810,-#_0bcb74ca5e732112580c17562abc51e9 | p@chr14:30786806..30786810, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr5:99385820..99385831,-#_0bcb74ca5e732112580c17562abc51e9 | p@chr5:99385820..99385831, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:150006500..150006508,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr5:150006500..150006508, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:238859791..238859796,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr2:238859791..238859796, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:1154360..1154365,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr1:1154360..1154365, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:150006500..150006508,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr5:150006500..150006508, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:189481131..189481134,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr1:189481131..189481134, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:1154830..1154841,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr1:1154830..1154841, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:189481131..189481134,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr1:189481131..189481134, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:1154830..1154841,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr1:1154830..1154841, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:135043585..135043591,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr3:135043585..135043591, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:44414731..44414733,+#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr19:44414731..44414733, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr19:7795730..7795740,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p5@CLEC4G |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:135043585..135043591,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr3:135043585..135043591, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:54464025..54464030,+#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr10:54464025..54464030, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:44414731..44414733,+#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr19:44414731..44414733, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr8:127508635..127508640,+#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr8:127508635..127508640, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:104465140..104465144,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr6:104465140..104465144, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr8:127508635..127508640,+#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr8:127508635..127508640, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:63204408..63204412,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr10:63204408..63204412, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr19:7795730..7795740,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p5@CLEC4G |
| 2.39e-66 | FFCP PHASE1:Hg19::chr13:56591781..56591785,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr13:56591781..56591785, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:175084679..175084689,+#_dd79ea92f8174e44b2fecb66e95d0ae7 | p4@HRH2 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:104465140..104465144,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr6:104465140..104465144, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:175084679..175084689,+#_dd79ea92f8174e44b2fecb66e95d0ae7 | p4@HRH2 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:42043637..42043640,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr2:42043637..42043640, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:54897467..54897468,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr7:54897467..54897468, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:203150041..203150049,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr1:203150041..203150049, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:54464025..54464030,+#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr10:54464025..54464030, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:42043637..42043640,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr2:42043637..42043640, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr18:40200823..40200829,+#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr18:40200823..40200829, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:238859791..238859796,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr2:238859791..238859796, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr13:56591781..56591785,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr13:56591781..56591785, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:63204408..63204412,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr10:63204408..63204412, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:54897467..54897468,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr7:54897467..54897468, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:203150041..203150049,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr1:203150041..203150049, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:1154360..1154365,-#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr1:1154360..1154365, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr18:40200823..40200829,+#_dd79ea92f8174e44b2fecb66e95d0ae7 | p@chr18:40200823..40200829, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr3:39233987..39233993,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p14@XIRP1 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr9:86211495..86211499,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p1@ENST00000362613 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr2:16526810..16526812,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr2:16526810..16526812, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr1:11905799..11905806,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr1:11905799..11905806, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr4:88042092..88042099,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr4:88042092..88042099, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr3:39233987..39233993,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p14@XIRP1 |
| 4.66e-66 | FFCP PHASE1:Hg19::chr13:25345488..25345491,+#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr13:25345488..25345491, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr1:11905799..11905806,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr1:11905799..11905806, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr21:40459334..40459341, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr4:88042092..88042099,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr4:88042092..88042099, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr10:37485037..37485044,+#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr10:37485037..37485044, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr8:135501299..135501346,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr8:135501299..135501346, - |
| 4.66e-66 | FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr21:40459334..40459341, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr8:135501299..135501346,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr8:135501299..135501346, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:25345488..25345491,+#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr13:25345488..25345491, + |
| 4.66e-66 | FFCP PHASE2:Hg19::chr1:11907265..11907271,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p9@NPPA |
| 4.66e-66 | FFCP PHASE1:Hg19::chr1:11907265..11907271,-#_1c49a9fe85023e32f0b4347ac82e46f5 | p9@NPPA |
| 4.66e-66 | FFCP PHASE2:Hg19::chr10:37485037..37485044,+#_1c49a9fe85023e32f0b4347ac82e46f5 | p@chr10:37485037..37485044, + |
